Triplophysa rosa: 130552732
Help
Entry
130552732 CDS
T09216
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tros
Triplophysa rosa
Pathway
tros02010
ABC transporters
tros04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130552732 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130552732 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130552732 (abca1a)
Transporters [BR:
tros02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130552732 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
DUF7447
Motif
Other DBs
NCBI-GeneID:
130552732
NCBI-ProteinID:
XP_057187239
LinkDB
All DBs
Position
LG4:complement(25986937..26015683)
Genome browser
AA seq
2265 aa
AA seq
DB search
MVVFTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPHEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLLTDAKKILLYSQQDK
SFEGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSVFLEKNASLSEHAVKEIVEANVNLE
KVLIRGFGVHLRDLCNSTSLEDFVTIADKDVSQLTQNIICQSSTEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSMATDSLLESLGTLAVELVSMKSWRDMRTEILYLTGNSTQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDHNYNALFGNHGNNSDEEPVSMYDNSSTPYC
NNLMTGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGGM
WEEIRPKIFNFMENSEEMDLVRTLLQNNASARFFNAKLVGTDWRVEDVSSFLSKASEDTR
PSGTSYTWREVFDETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDNRKFWAGI
VFPDMQLNTSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKIGVYIQQMPYPCYVDDMFLQVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVVILKMGNLLPYSDPG
VVYLFLTSFAIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGYGCEYFALFEEQGVGIQWSNLLSSPLEEDNYSLTTSISLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTTSVSNNKKENAEAKCIEEEPSHL
VPGVYIENLGKVYSNGKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSDLNTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQIV
MDLGLPHKRKCRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLK
YRQARTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVSYFKGSLKKEDSVSDSSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARMVEDLGHEITYVLPYKYAKAGGFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGILPTRRNRRHAFGDHQSCLKPFTEDEFDFNDSEESRETDWLGGADGKGS
YQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPS
LALKPSMYDEQFTFVSNDAPQDGHTNRLLEALMDNTAHNEKCSDKQKSTSKSCSAGDAEW
MTAEVPESIQDMFLEGNWSMENPSPFCECSCEGRKRMLPECPPGAGGLPPPQIQVTSSET
LQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGNEINDAIT
HIRKRFSLKTGAAADRFLKGLSTFIRGLDTKNNVKIWFNNKGWHSIGAFLNVMNNAVLRS
NLPAGPERSKFSINAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFL
IQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSSTNLP
VLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSINILIGINGSVSTFVLELFGSNEI
GGINNILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFAM
AVEGLVFFCITVLIQYRFCIKARSVSSKLQPIGEEDEDVARERQRILGGGGQTDILEIKQ
LTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDAVITSGEAYLAGKS
VLTEINEVHQKMGYCPQFDAINDLLTGREHLEFYAILRGIPEKEVCEVADWGIRKLGLMK
YVDKEAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKEGRS
VVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSDPQLEPVM
EFIERKLPGSTLKEKHRNMLQYQLPSSLTSLARIFSILSKNKEQLHIEDYSVSQTTLDRV
FVNFAKDQSDEDHLKDISVNKGDTVVDISQLKAFLIDEKAIETVV
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atggttgtctttactcagttaggattactgctgtggaagaacttcacttaccgacggaga
cagactattcagctgctgatcgagataatctggcccctctttatctttttcatcctgata
tctgtcagacttcactatcctccacatgaacaacatgaatgccactttcccaataaggcc
atgccctccgcgggaacgttaccctgggtgcagggcatcatctgcaatgctaacaaccca
tgctttcgctatcccactcctggagagacccccggggtggtgggaaacttcaatgactcc
attatctcccgactgttaaccgacgccaagaaaattctcctctacagtcaacaagacaag
agctttgagggattcaaaggactggttagggccttgagaaaactgcagagaaatactgaa
ggtttcaaactcaaggactttctgcgtgataatgaaacgttgtctgtgtttctcgagaaa
aatgcgtctctgtccgagcatgcagtgaaagagatagtggaggccaacgtcaacttggag
aaggtccttattagaggttttggagttcacctcagagacctgtgcaattctacgtctttg
gaggattttgtaaccatagctgataaggacgtgtcccagctgacacaaaacatcatctgt
caatcatccactgaatggttaaacaatgcagagagccacttcctgtccaacctcgacttc
ctgaagccaatacggaaagatgtaaagtctgacccaaagattatccaagatgtgtccatg
gcaacagacagcctgctggagagcttgggaacattagccgtggagcttgtgagtatgaag
agctggcgagacatgcgaacagagatcctctacctgacaggaaacagcacacaatccccc
aaccacatgtaccaggccgtgtctcgcatcgtgtgcggtcacccggagggaggcggcctc
aagataaagtccctcaactggtacgaggatcacaactataatgcgctgttcggtaaccac
ggcaacaacagcgatgaagagcctgtgtccatgtacgacaactcctccacgccctactgt
aacaaccttatgacgggtttggagtccagtcccatttctcgcatgatctggagggctctg
aaaccattgctcatgggaaagatcttgtacacaccagatacacctgccacccagaggatc
atacatgaggtcaacaagacatttcaagagttcggagtgctcagagatcttgggggcatg
tgggaggagataagaccgaaaatcttcaacttcatggagaacagcgaggagatggacctg
gtcaggacactactgcagaacaacgccagcgctcgtttcttcaatgccaagctggtcggg
acagactggcgcgtggaggatgtgtccagtttcctgtccaaggcctcggaagacacgcgt
ccctctggaacatcatacacgtggagagaggtcttcgacgaaaccgatcaggccatacaa
accatctctcgatttatggagtgtgtgaacctggataagctggagccggtggccaatgaa
gaacgcttggtaaataaatccatgcgtctgttggacaaccgcaagttctgggctggaatc
gtgtttcctgatatgcagttgaacacatctgaactgccaccaaacgtcaactataagata
cgaatggacattgataatgtggagcgcaccaacaagatcaaggacggatactgggaccct
ggtcctcgtgctgacccgtttgaagatctgcgctacatctggggcggattctcctacctg
caggacgttattgagcacggtatcatcagagcgctgacgggcagcaaagagaaaattgga
gtttacattcaacagatgccttatccctgctatgtggacgacatgttcctgcaggtcatg
agtcgctcaatgcctctgttcatgactttagcctggatgtactcggtagcgatcatcatc
aaaggtgttgtttacgagaaagaagcccgtctgaaagagaccatgaggattatgggtcta
gataatggaatcttgtggctgagctggtttataagtagtctgataccattgctcatcagc
gccgccctactggttgtcatcctaaagatgggcaatctactgccttacagtgacccaggc
gtcgtttacttgttcctgacttccttcgctattgtgaccatcatgcagtgtttcctcatc
agcacgcttttctctcgcgctaacctcgcggctgcctgcggaggcatcatatacttcacc
ctctacctgccttatgtgctgtgcgtggcctggcaggattacgtgggctttggggctaaa
gtggttgtgagcctcctgtcccccgttgcgtttggctatgggtgcgagtacttcgctctc
ttcgaggaacagggtgtaggcatacagtggagtaacctgctctccagccccctggaggaa
gacaactacagtctcaccacatccatctctctcatgctgtttgacgctgtgctgtacggc
atcatgacctggtacattgaagccgtgttcccgggccagtatggcatcccacgtccgtgg
tacttcccattcacaaagtcatactggtgtggggagaagtgtggctggacgacatcagta
tccaacaacaagaaagaaaatgctgaagccaaatgtattgaagaggagccatctcacctg
gttcccggtgtttacatcgagaacctaggtaaggtctatagtaacgggaaactggcggtg
gatggtttgactctgggcttttatgaaggccagatcacctccttcctgggtcacaacggt
gctggaaaaaccacaaccatgtctattctcactggtctgttcccacccacctcgggcaca
gcttacatcatgggcaaagacatccgctccgatctaaacactattcggcagaacctgggc
gtgtgtccgcagcataacgtcctgtttagcatgctcaccgtagaggaacacatctggttc
tacgctcgcctgaagggtttgcctgaggagaaggtgaaagcagagatggagcagattgtg
atggatctcggcctgcctcataagcgcaagtgtcgcaccagtcagctgtcaggtggaatg
cagagaaagctgtccgtcgccctggcgtttgttggaggttcaaaggtcgtgatactagac
gaacccaccgctggagtggatccttattctcgccgaggcatctgggaccttctgctaaaa
tatcgtcaagctcgcacgatcatcctctcaacgcaccacatggacgaagccgatatcttg
ggagatcgcattgccatcatctcccatggaaagctctgctgtgtgggttcctcgctgttc
ctcaagacccagctgggtacgggatactacctgacgctggtgaagaaagacttcgatctc
tccgcgagctcttgtcgaacatccagcagcaccgtgtcttatttcaaaggaagtcttaag
aaggaggacagcgtgtctgatagcagttctgatgctggactgggcagcgaccacgaaagt
gaaacgaccacaatagatatctccctgatctctaacgtgattttcaagcacgttcccaca
gccagaatggttgaagatctgggtcatgagatcacttacgttctgccctacaagtacgct
aaagccggagggtttgtggagcttttccacgagatcgacgatcgactcaccgacctcggc
atttcaagctacggcatctctgatacgactctggaagagattttcctcaaagtcgcagag
gacaacggggtggatgctgaaatgtcagatggaattctacccacacggagaaatcgtcga
catgcttttggtgaccatcagagctgtctgaagcccttcactgaagatgaatttgatttc
aatgactcagaagaatcgcgtgagacagactggttgggcggagctgatggtaaaggctcg
taccaggtgaaaggctggagtctgaagagacaacagttcgtggctttgctctggaagcgc
ttcctctacgcccgacgttcccgcaaaggtttctttgctcagattgttctgcctgctgtt
ttcgtgtgcattgccctggtcttcagtctcattgtacctccatttggaaagtatccaagc
ctcgctctgaaacccagcatgtatgatgagcagttcacctttgtcagcaatgatgcacct
caagacggacatacgaacaggttacttgaagcactgatggacaatacggctcacaatgaa
aaatgctcagacaagcagaaatcaactagcaagtcatgttcggctggggatgcagaatgg
atgactgcagaggttccagaaagcattcaggatatgtttctggagggaaactggagcatg
gaaaacccgtcacctttttgtgagtgcagctgtgaaggacggaaaaggatgcttccggaa
tgtccgccaggagcggggggtctgcccccacctcagattcaagtcaccagttctgaaacc
ttacagaatctgacaggcagaaatatttcagattacttggtgaagacgtacgctcagatt
atcggcaaaagcttgaagaacaaactctgggtcaacgaattcaggtatggtggattctca
ttgggtgctagaagctcacaggccctcccgcctggcaatgagatcaatgatgccatcact
cacattcgtaaacgcttcagtcttaaaacgggcgctgcagctgatcgctttctgaaaggc
ctgtcaacatttatccgaggacttgacaccaagaacaacgtaaagatctggttcaataac
aagggctggcacagtatcggagcgttcctcaacgtcatgaacaatgccgtcctgcgctct
aatctccccgccggccccgagcgctccaaattcagcatcaatgcgttcaaccacccgctc
aatctgaccaaagagcagctctcgcaggtggccctaatgacaacctcagtggacgtcctg
gtgtccatctgcgtcatcttcgccatgtccttcgtcccggccagttttgtggtgttcctc
attcaagagagagtgaataaagcaaaacacatgcagtttatcagcggagtgcagcctttt
ctctactggctggccaactttgtctgggatatgtgcaactacattgtcccagcaacgttg
gtcatcatcatcttcgtctgtttccagcaggaggcttacgtgtcctccaccaacctccct
gttctcgctctactgctgttgctctatgggtggtccataacccccctgatgtacccagca
tcattcttctttaagattcccagcacggcatatgtggttttgacaagcattaacatcctc
attgggataaacggcagcgtgtccacgtttgtcctggagctgtttggcagcaatgagatt
ggcggcatcaacaacatcttgaagaatgtgttcttgatcttccctcacttctgtctgggc
agaggtctcatcgacatggtgaagaatcaagccatggctgatgctctggagagattcggc
gagaatcggttccgttctcctctggcgtgggacatggtgggcaagaatctctttgccatg
gctgtagaaggcttggttttcttctgtatcaccgtcctcatccaataccgtttctgcatc
aaggccaggtcagttagctctaagctgcagccaataggagaggaggatgaagatgtggcc
agagagaggcaaaggattctgggaggaggcggacagacggatattctcgagatcaagcag
ctcacaaaggtgtataagaggaaacagaaaccagctgtagaccgactgtgcgtgggcatc
ccaccaggagagtgttttggtttgctcggtgtgaacggagctggaaagacgagcacgttc
aagatgctcaccggagatgctgtaatcactagcggagaggcctacttggcaggcaagagc
gtgttgacagaaatcaatgaagtccatcagaagatgggatattgtccacagtttgatgcc
atcaatgacctgctaaccggccgggaacatctggagttttacgccattctgaggggcatc
ccggagaaagaagtgtgcgaggtggcagactggggtattcgtaaactggggctaatgaaa
tatgtcgacaaagaagcgggaagctatagtggaggaaacatgagaaaactctccaccgcc
atggcactcattggaggcccacctgtagttttcctggacgaacccaccactgggatggac
cccaaagcccgacgggcgctgtggaactgcatcctcagcatcattaaagagggacgctcg
gttgttctgacatcgcacagtatggaggagtgtgaagctctctgcactcgtatggccatt
atggtcaacggcaggttccgctgtctgggcagcgtgcagcacttaaagaacaggttcggt
gacgggtacaccatcatcttgcgggtggcaggttccgatccgcagctggagccggtgatg
gagtttattgagcggaagctgccgggcagcaccctgaaggagaaacacagaaacatgctg
cagtaccagctgccatcctccctcacctccctcgcccgcatcttcagcattctctctaag
aacaaagagcagctccacatcgaggactactccgtctcacagaccaccttagaccgagtg
tttgttaattttgccaaggaccaaagtgacgaggaccacctgaaagacatttctgttaac
aaaggcgataccgtggtggacatttcccagctgaaggctttccttatagacgagaaggcc
atagagactgtcgtgtga
DBGET
integrated database retrieval system
