Triplophysa rosa: 130552781
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Entry
130552781 CDS
T09216
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130552781 (pcdh10a)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Protocadherins
130552781 (pcdh10a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
CDC13_N
Motif
Other DBs
NCBI-GeneID:
130552781
NCBI-ProteinID:
XP_057187330
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Position
LG4:7040467..7060721
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AA seq
1001 aa
AA seq
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MILIFLFFSILDGGLSQIHFSVPEEQERGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVNERIDREEICRQTVPCLLHLEVFLENPLELFRIEIEVMDINDNPPSF
PETDITVEITESATPGTRFPVENAFDPDVGTNALNTYAITTNNYFYLDVQTQGDGNRFAE
LVLDKPLDREQQAVHRYVLTAVDGGQPQRTGTALLVVKVLDSNDNAPTFDQSVYSVSLRE
NSPVGTLVIQLNATDMDEGQNGEIVYSLSSHNPPRIRDLFNIDSRTGRIEVTGEVDYEES
STHQIYVQAKDMGPNAVPAHCKVLVKLIDVNDNTPEVSFSTVTESVSEQAAPGTVIALLS
VTDRDSGENEQMTCELHGEVPFKLKSSFKNYYTIVTDGPLDREKAESYTLTVVAKDKGVP
SLSTSKSIKVHVSDENDNAPRFMQSVYDVYVTENNVPGAYIYAVSAVDPDVGQNAYVTYS
ILECEIQGMSILTYVSINSENGYLYALRSFDYEQIKEFSFMVHAKDSGSPELTANATVNV
IIVDQNDNAPSIIAPLGKNGSAREHLPKSAEPGYLVTRIVATDADDGENARLSYSILRGN
EIGMFRMDWRTGELRTARRVSSKRDPPHPYDLLIEVRDHGQPPLSSSASINVVLVDSIVE
GRSGDRGSVKSKEGSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCMAGDS
CCQCCSRQARGRKKKLSKSDIMLVQSTNVASTAQVPVEESGSFGSHHQNQNYCYQVCLTP
ESAKTDLMFLKPCSPSRSTDAEHNPCGAIVSGYADQQPDIISNGSILSSETKHQRTELSY
LVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHTAGADLFSNCTEECKAL
GHSDRCWMPSFMPSDSRQGADYRSNLHVPGMDAVPDTEVQESVVPADACFGPDDRSFSTF
GKDKSHHGTLTRHELHTLLPSARAPHKPNYLCEYSLKLYDF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatatttctctttttctcgatcttggatggagggttatcgcagatacacttc
tcggttccggaggagcaggagcgcgggacggttgtgggaaatatcgccgaagatctggga
ctggacattaccaaactttccgcgcgccgtttccagaccgtgcctagctcgcgcactccg
tacctggaggtaaacttggaaaacggcgcgctggtggtgaacgagcgcatcgacagagag
gagatatgtcgccagaccgttccgtgcctcctgcacctcgaagtgtttttggagaacccg
ctcgagctgttccgcatcgagatcgaggtgatggatataaacgacaatcctccgagtttc
ccggagacggacatcaccgtggagatcaccgagagcgccacaccgggcacccggttccca
gtggagaatgccttcgatccagatgtagggactaatgccctgaacacctacgccattacc
accaacaactacttttacttggacgtacagacgcagggtgacggcaaccggttcgcggag
ctcgtgctggataagcccttggaccgggagcagcaggcggtgcataggtacgtgctcacc
gccgtggacggagggcagccgcaaaggaccggtaccgcattgctggtggttaaagtattg
gactccaacgacaacgcgcccacgttcgatcaatccgtgtactccgtgagcttgcgtgag
aactctcccgttggcacgctcgttatacagctgaacgccaccgatatggacgagggccaa
aacggagagattgtttactctctaagtagtcacaatccgccgcgcattcgggatctgttt
aacatcgactcgcgcaccggtaggattgaagtgaccggcgaggtggattacgaggagagc
agcacgcatcaaatctacgtgcaggctaaagacatgggaccgaacgccgtgcccgcgcac
tgcaaagttttggttaaactgatagacgtcaacgacaacacgccggaggtcagtttcagc
accgtcaccgagtcggtgagcgagcaggctgccccgggcacggtgatcgctctgctaagc
gtgacagaccgcgactccggtgagaacgaacagatgacctgcgagttgcacggcgaggtg
ccgttcaaactcaaatcgtcttttaaaaactattacaccatagtcacggacggtccgctg
gatcgcgaaaaagcggagtcgtacacgctcactgtggtcgcgaaggataagggggtgccc
tctctctccacaagcaagtctatcaaagtgcacgtttcggacgaaaacgacaatgcccct
aggttcatgcagtcggtttacgacgtgtacgtcacggagaataacgtcccgggcgcgtac
atttacgcggtgagcgccgtcgaccccgatgttggacagaacgcatatgtcacttactcc
atattggagtgcgaaatacagggtatgtccattttaacatacgtgtccatcaactccgag
aacggctatctgtatgcgctacgctctttcgattacgagcaaattaaagagttcagtttt
atggtgcacgccaaggactccggatcccccgagttaacggccaatgccacagttaatgtc
atcatagtggaccagaacgacaatgccccgtcaataatagcgcccctgggcaaaaacggt
tccgcgagggaacatttacccaagtcggccgaacctggatacctggtgacccgtatcgtc
gccacagatgcggacgatggcgaaaacgcgcgcctatcctacagcatcctgcgggggaac
gagatcggaatgtttcgcatggactggagaaccggcgagctgcgcactgcgcgacgggtg
tctagcaaacgggacccgccgcacccgtacgacctgttgatcgaggtgcgcgatcacggc
cagccgcctctctcgtcctcggcgagcattaacgtggtgctcgtggatagcatagtggag
ggccggagcggagacagggggtctgttaagtcaaaagagggctcgctggacctgacgctg
atcctcatcatcgcgctcggctctgtgtctttcatcttcctcctcgctatgatcgtgctg
gccgtgcggtgtcaaaaagacaagaaactaaacatctacacgtgcatggccggagattcg
tgctgccagtgctgcagtcgccaagcgcgcgggcgcaagaagaaactcagtaaatcggac
ataatgctcgtgcaaagcactaacgtggccagcaccgcgcaagtgccggtggaggagtcc
gggagcttcggttcccaccaccagaaccagaattactgctaccaggtgtgcctgacaccg
gagtccgccaaaaccgacctgatgttcctcaaaccgtgcagcccgtccaggagtacagac
gcggagcacaacccgtgcggcgccatcgtttccggatacgcggaccagcaaccagacatc
atctccaacggaagcattttatcaagcgagaccaaacaccagagaactgagctcagctac
ctggtggatagaccacgtcgtgttaacagttcagcatttcaagaggcagatatcgtcagt
tctaaagacagtggacacggagacagcgaacagggcgacagtgaccacgacgctaccaac
cggggccacacggctggggctgatcttttctccaactgcacagaagagtgcaaggctctg
ggtcactccgaccgatgctggatgccctctttcatgcccagcgacagtcgccagggtgcc
gattaccgtagcaacctacacgtcccggggatggatgcggtaccggacactgaggtacag
gagagcgtggttccggccgatgcgtgctttgggcctgatgatagatcattctctacgttc
ggcaaagacaagtcacaccacggcacgctcacacgccacgagctacacacactcttacca
agcgcgagagcgcctcacaaacccaactacctgtgtgagtactcactcaaactgtacgat
ttctga
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