Triplophysa rosa: 130552841
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Entry
130552841 CDS
T09216
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130552841 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130552841 (taf5)
03036 Chromosome and associated proteins [BR:
tros03036
]
130552841 (taf5)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130552841 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
130552841 (taf5)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130552841 (taf5)
STAGA complex
130552841 (taf5)
TFTC complex
130552841 (taf5)
SAGA complex
130552841 (taf5)
SLIK complex
130552841 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
LisH_TPL
VPS8_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
130552841
NCBI-ProteinID:
XP_057187455
LinkDB
All DBs
Position
LG4:complement(27384608..27389083)
Genome browser
AA seq
737 aa
AA seq
DB search
MAAVQDGPMELDTEKETKPEILSDGSANLSGNAGSGVLSSSPHAAGAQKPEDQQTLIAVL
QFLRRNKLTESVDILKREAGLSDDQENSKATDTGGKGDGDAGDANALLSRVSITSATAPQ
SAPLPLKSGDDQPDVRVVLSAYSQQGEPPLYKVYYSDLKKFIESVLDCHRAELSQLFYPL
FVHMYLELVYNNNESEARAFFDKFSGDQECYYQDDLRVLCGLTKKEHMKGNETLLDFRTS
RFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAGEA
KREVNKVKVYYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKAKKDSLGSKSKKQDPNAPQ
QNRIPLPELKDSDKLDKIMYMKESTKRIRLSPENLPSICFYTFLNAYQGLTAVDFTDDSS
LLAGGFSDSTVRVWSVTPKKLRKVKSAAELNLIDKESDDVLERIMDEKTASESKVLYGHG
GPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSG
GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTVRLWDVLNGNCVR
IFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDTIYSLRFSRDG
EILASGSMDNTVRLWDAMKAFDDIEMDDFTAATGHIHLYDNSQELLLGSYNSKSTSVIHL
HFTRRNLLLAAGMYNSQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatgggccgatggagctggacaccgagaaagaaacaaagcccgaa
attctcagcgatggttcagcaaacctctcgggaaatgcggggagcggggtgctttcctca
tcgccccacgccgccggagctcagaagccagaggaccagcaaactttgattgcggtgctg
cagtttctgaggcggaataaattgacggagtcggtggatatcctaaagcgtgaagccggt
ctctcggacgatcaagagaactcaaaggctactgataccggagggaagggtgatggagac
gctggagatgcaaacgctttgctcagccgtgtgtccatcacatcagcaaccgccccccag
agcgctcctctgcctcttaaaagtggggatgaccagccggatgtcagagttgtgttgtca
gcatacagccagcaaggagaaccacctctttataaggtttactacagtgacctgaaaaaa
ttcatagagtcggtcctggactgtcacagggccgagctgtcccaactcttctatcctctg
tttgttcacatgtacctggagctggtctacaacaacaacgagagcgaagccagggctttc
ttcgacaagtttagcggtgatcaggaatgctactatcaggacgacctgcgtgttctctgt
ggcctcactaaaaaggaacacatgaaggggaacgagactctgctggacttccgcaccagc
cgcttcgtgctccggatctcccgtgactcgtaccagctgctgaagaggcacctgcaggag
aggcaaaataaccagatatggaacatcattcaggagcacctgtacatcgacatctttgac
ggcatgccccgcagcaagagtcagatcgacagcatgtccggcagtctcgccggagaggcc
aagcgagaggttaacaaggtcaaggtatactatgggctgctaaaggaaccagagatcgag
gtccctctggacgatgaagatgatgaagcggagaacgaggaaggaaagcccaagaagaag
aaagctaagaaggacagcttgggctcaaagagcaaaaaacaagatcccaatgcacctcag
cagaacaggatccctctgccagagctgaaagactcagacaagctggataagatcatgtat
atgaaggagagcactaaacgaatccgactcagtccagagaacctgccttccatttgtttc
tacacattcctcaacgcctaccagggtttgacggcagtagacttcacagatgactcaagt
ctactagcgggagggttttccgattccaccgtccgcgtgtggagcgtcacacccaaaaag
ttacgcaaagtcaagtctgcagcagaactgaatctgattgataaggagtccgatgatgtt
cttgaaaggatcatggatgagaagacagccagtgagtctaaggtcctctacggtcacggc
gggccggtgtacggtgtcagctttagcccggacaggaactatttgttatccagttctgag
gatggtacagtcaggctgtggagtctgcagacgtttacttgtctcgtggggtataaagga
cacaattatccagtgtgggacactcagttttcaccctttggttattattttgtgtctgga
ggacatgatagagttgcacgcctctgggcgacagatcattaccagccactgcggatattt
gctggacatttagctgacgtcacctgcacacgctttcacccgaacgctaattacgtggca
acaggctccagcgatcgcaccgtgcgcctctgggatgtcctgaatgggaactgtgtccga
attttcacaggtcacaaggggcccatccattctcttgctttctcacccaatggaaagttc
ttggcgtctggcgcaacagatggacgagtactgctatgggatatcggacacgggctgatg
atcggcgagctcaaaggtcacacagacacgatttattccctcaggtttagcagagatgga
gaaattcttgcatcaggatctatggataatacagtacgactgtgggatgctatgaaggct
tttgatgacatagagatggacgatttcactgcagcgaccggacacattcacctatatgat
aactcccaggagctcctgctagggtcgtacaattctaaatccacatctgtcatccacctg
cacttcaccagacgcaacctgctgctggccgcagggatgtacaactcccagtga
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