Triplophysa rosa: 130552869
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Entry
130552869 CDS
T09216
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tros04054
]
130552869
Pattern recognition receptors [BR:
tros04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130552869
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
130552869
NCBI-ProteinID:
XP_057187506
LinkDB
All DBs
Position
LG4:complement(32362435..32378869)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSRHGVKEEEVEVYQSQMPRVSSPEPSCVSVRSDQSMRQPPIFSDGAVTSDPSINRLKRS
RTSSPEPSRVSLKSNQSMLDPIDFRDGAVNSDPRAANPGVFCNRPFNLNRLKRPRAASPE
PSCVSVQYDPSVRQSSVFSDGAVNSDPRSEKMWNKTESDLLEETEDMQQDCHDESVDDVL
QRVKHKHKSIMKNKYESLFEGMKAQENQTLLKRIYTQLYIREGESEGVNEEHEVLHMEKQ
PRRTQDLQDTPIYCNDIFTPQSHQRHKIKSVLTKGIAGIGKTVSVHKFILDWAEGTANQD
VDFMFLLPFRELNLIREHRYSLHKLLLDFHPELQDVDSQIYEECKVVFIFDGLDESRMTR
MFSDHSEKVSDVTDASSVAVLMSNLMKGDLLPSALIWITSRPAAANQIPSKYITRVTEIQ
GFDDAQKEEYFRKRISDEHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKILTQDHS
EEIPKTLSEMYIHFLLIQMKMKNEKYDPERDPEINREVIVKLAEVAFKQLMKGNVMFYEE
DLRECGIDITDASLYSGICTEIFKEESVIHQRKIYSFIHLSLQEFLAAFYWFHCCTCSTL
TVLGDFQPLYNLLKGAVDKGLESETGHLDLFLRFLLGLLLESNQRLLHDLLTHTVDTSQT
IKKTTQYIKDQIKGNDGLSAERSINLFLCLFEVKDQTLYREIEEFVRSDKHSEKKLSAAH
CSAIAYMLQMSEEVMDEFDLKKYNTTQEGRRRLIPAVNNCTRALLAECNLTVESCRIISS
ALQSSDSPLRDLDVSNNDLQDSGVKLISDALNNTNCHLHILRLSGCMVTDEGCCYLASAL
SSNPSHLRELDLSYNHPQHSALQLLAYQSDPNYTLNKLNLDYGGLCRVKPGLQKYLCDLT
LDPNTANVHLMLSEENKKVTYVKDPQPYPDHPDRFEGVPQVLSRESLTGRCYWEAEWKVW
ARIAVSYKETSRKEASNSMFGLDDKSWSIFCNSNGFNVWHNNKTKNIPAPSSSSNRVGVF
VDCSAGTLSFYSVSDTHTLTHIHTFNTTFTQLLYAGIMINLLNSSVSLSK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcatggggtaaaagaggaggaggtcgaggtttatcagagccagatgcccaga
gtatcatctccagaaccgagctgtgtgtcagtgaggagtgaccagtccatgagacagccg
cctatattcagtgatggtgcagtgacttctgaccccagcatcaacaggttgaagagatcc
agaacatcatctcctgagcctagccgtgtgtcattgaagagtaatcagtcaatgttggac
cccatagatttcagggatggagcagtgaactctgaccccagggccgctaatccaggtgtt
ttctgcaatcggccctttaatctcaacaggttgaagagacctagagcggcatctccagaa
cccagctgtgtgtcagttcagtatgatccatccgtgaggcagtcatctgtattcagtgat
ggagcagtgaactctgatcctcgcagtgagaagatgtggaacaagacagaatcagaccta
ctggaggagactgaagacatgcagcaggattgtcatgatgaatcagtggatgatgttctg
cagagagtgaaacacaaacacaaaagcatcatgaagaacaagtatgagagtttatttgag
ggaatgaaagcacaagagaatcaaacgctcctgaagagaatttacacacagctgtacatc
agagagggagagagtgaaggagtgaatgaagaacatgaggttttacacatggagaaacag
cccagaagaacacaagacttacaagacactccaatctactgcaatgacatcttcacacct
caatctcatcaaagacacaaaatcaagagcgttcttactaaaggcatcgctggaattgga
aaaacagtctctgtgcacaagttcattctggattgggccgagggaacagccaatcaggac
gtagatttcatgttcctgcttccgtttcgagagctgaacttgattcgagagcatcgctac
agtcttcacaaacttctgctggactttcatcctgaacttcaagatgtggactctcagatt
tatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatgacacgg
atgttttcagaccacagtgagaaagtttctgatgtgacggacgcttcatcagtggccgtg
ttgatgtcaaacctcatgaaaggagatctgcttccctccgctctcatctggatcacctcc
agaccagcagcagccaatcagatcccctccaaatacatcacgcgtgtgacagaaatccag
ggattcgacgacgctcagaaggaggaatatttcaggaagagaatcagcgacgagcatcaa
gccagcagaatcatatcccacattagaagagcgagaagcctccacatcatgtgtcacata
ccggtcttctgttggatctcctccactgtgcttcagaagatcctgacacaagatcacagt
gaagaaatccccaaaactctgagtgaaatgtacatccacttcctgctgatccagatgaag
atgaagaatgagaagtatgatccagagagagatccagagatcaacagagaagtgattgtg
aaactggctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaggag
gatctgagagagtgtgggatagacatcactgacgcctcgctgtattctggcatctgtact
gagatctttaaggaggaatctgtcattcatcagaggaagatctacagcttcatacatctc
agtcttcaggagttcctcgcggcgttctactggtttcactgctgtacatgcagtactctc
acagtgcttggagattttcaaccgttgtataatctgcttaaaggtgcagtagataaaggt
cttgagagtgaaactggtcatctggatcttttcttgaggtttctgctgggcctcttgttg
gagtccaatcagagactcttacacgatctactgacacacacggtggacacctcacaaacc
atcaagaaaaccacacagtacatcaaagatcaaatcaagggtaatgatggtctgtcagct
gaaagatccatcaatctgttcttgtgtctgtttgaagtgaaagatcagactctgtacaga
gagatcgaggagtttgtgagatcagacaaacactcagagaagaaactctcggccgctcac
tgttcagcaatagcctacatgcttcagatgtcagaggaggtgatggatgagtttgatctg
aagaaatacaacacaacacaggagggcagaagaagactcataccggctgtcaacaactgc
acaagagctctacttgctgagtgtaatctcacagttgagtcttgtagaattatctcttca
gctcttcagtcctcagattctcctctgagagatcttgatgtgagtaacaatgatcttcag
gattcaggagtgaagctgatctctgatgctctcaacaacacaaactgtcatctacatata
ctgagattatcaggttgtatggtgacagatgaaggatgttgttatttggcttcagctctg
agttcaaacccgtcgcacctgagagaactcgacctgagctacaatcacccacaacactca
gcacttcagctgctcgcttatcaaagtgatccaaactacacactcaacaaactcaattta
gactatggaggactttgcagggttaaaccgggactgcagaaatatttatgtgatctcaca
ctggatccaaacacagccaacgttcacctcatgctgtctgaagagaacaaaaaggtcaca
tatgtgaaagatcctcagccgtatcctgatcatccagacagatttgaaggtgttcctcag
gttctgagtagagagagtctgaccggacgttgttactgggaggctgaatggaaagtgtgg
gcccgtatagccgtgagctataaagaaaccagcaggaaagaagccagtaatagtatgttt
ggacttgatgacaaatcctggagtattttctgcaattccaatggatttaacgtttggcac
aacaataaaaccaagaacatacctgctccttcatcttcatctaatcgagtaggagtgttt
gtggattgttcggccggcactctgtccttctacagcgtctctgacacacacacactcaca
cacatacacacattcaacacaacattcactcaactgctatacgccggaattatgattaat
ttactcaactcttcagtgtctctgtccaaataa
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integrated database retrieval system
