Triplophysa rosa: 130552928
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Entry
130552928 CDS
T09216
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552928
Membrane trafficking [BR:
tros04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130552928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
130552928
NCBI-ProteinID:
XP_057187635
LinkDB
All DBs
Position
LG1:38430843..38452621
Genome browser
AA seq
1577 aa
AA seq
DB search
MMEDGGPRVADYFVVSGLSEASAPLGQEVVFDDACHKAAQTKLPITDVIVLMRSIGEDVP
AGYTCVESTPSGLSADLNHGSLMAPEFYICYRRGRDKAPLTDLGVIYEWKEKVKQGHHVI
QKTPYGRPANLSGTSSQRIYITYQRATESPAPVCITDICIIVPGKGEKTPCTFCKIDKNL
SSSMWGSAVYLCYKKSVMNSNSVAYRAEMLSRYPEEDYESFSLPESVPMFCLPMGVSVER
WTPHVKYLLPTYSTFVLTGASGEKVYGAALQFFEVYAEERLTEHQRKQLNMTESKTTRVK
SCSRADTSSPVASGIIHANKCICVLSHWPFFDPFKKFLTFLYRYSVSGPHALPLEKHISH
FMHNVPFPSAQRPRILLQLSPHDSVLFSRPVLCPLPLSGGRFCTLLKHLGPENTTSVLLF
ALTEQKIVMHSTQAAVLTSVAEALLSMLFPLQWQCPYIPLCPLSLSGVLSAPCPFIVGVD
SRYFDIYEPPLDVICVDLDTNNIFRAEETQALTLKILPKKARKKLLNALKDLYVEMSDGP
RDDGLLDLFMCDLELSSGRTFQTVELNIQEVFLCFMADILKGYRSFLRPIIDVPSDTATD
ATSLFDLQGFVRHQDSSKQTFYSLLTKTQMFMRFIEERSFVSDRDASLAFFDECVEKLHG
TEQNSDGVKKDESRLIELDKSYCSEHTVFISPPELPTSPDGEEHMLSYSYSGFPLLRNEL
FDRVVDFPTSTKQTLIQQTCPTQTDSTLRRTKQELKWAQKTAHKYSAEPHLWSRRLLCCS
FGLWFICLPAYIKVCPSKTRALHAAYDTLRKMRERTLQPPDEVCYRIVMQLCGEYGQPVL
AVRVLSQMRKAGLHPNAITYGYYNKAVLENVWPSGTRGGYFLWSKLRNVIMAIAHLKSGL
KKQQHVTLTHYSCTETVSDHGPPSHHTQTRSASPPLSHANPSYHDAGLLFSSSLEDIGVV
NSRSCRCHHRSVDRSGAQHACRDSSHNTRAKTHSQDSRDPDSTPIFAFEDLDLDNTTDVE
MMWTNSGRSETRRASRRMDVKTGCDPLSLLASEFEEDTESSLQDTVCSPSVSRHLAEEIE
MYMKHSCSPRSSRAPSVDLGVVSNHSPRLMSASPNSSVGIDSLLPPSLDVLKSSVMSAGR
EVAERASRWYSQFAKDSDSDKQGVFSSEKENDAEDEEHCVTSSSVDQSASPEHSSACIFT
RRDWTCADHSDHRDDEQNCAMEVLMSSCSRCQTCDCLVYDEEIMAGWTADDSNLNASCPF
CANTFLPFLNIEIRDLRQPGRLFLKSSPSEKMLEPFTPTSTSAPHDSSRQTNPETHNSRT
FRPVEESIRSVATDRLSLSWRLHHPEPVTIQYLSPLVLWKELESLIENEGSDIICRSSVV
DKHPIIYWNLMCYFTRLQLPSNLTGLILTSEHCNRGSQIPRDWMSEDSRYVDVQLLWDNI
KLHRDEVQPLYVLWNTHSAGLGYPVSQAEAERVFDEDLLHNIIHSIERNDLYSPVCLMLT
PADRPQRERSLYRELLFLCRVTLGEDNIDIDAFDREYESAYERLTPDQIRRAHGCDQPPS
MTVTECRKTFGEPYLRL
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgggggtccgcgcgttgccgattattttgtggtgtctggtctgagcgaa
gcgtccgctccattgggtcaggaggtcgtgtttgatgacgcgtgtcataaagcagctcag
accaaactgcccatcacagatgtgatcgtgttgatgcgatctataggtgaagatgttcct
gcaggttacacgtgtgtagagagcacaccatcaggcctgtccgctgatcttaaccacggc
agtctgatggcaccagaattttacatctgctacagacgaggacgagacaaagcgcctctc
acagacctgggagttatttatgaatggaaagagaaagtaaagcaaggacatcatgtcatt
cagaagacaccgtacggacgcccggcaaacctgagcggcacttcatctcaacgcatttac
atcacatatcagcgagcgacggagagccctgcgcccgtctgtatcacagacatctgtatc
atcgtacccggaaaaggagaaaaaactccttgcacgttctgtaaaatagacaagaatctc
agcagcagtatgtggggttcagctgtatatctttgctacaagaagtctgtgatgaacagc
aactctgttgcttatagagcagaaatgctgagtcgatatcccgaagaagactacgagtcc
ttttctctgcctgaatctgtacccatgttctgtctgccgatgggagtttcagtggagcgc
tggacgccgcacgtcaagtacctgctgccaacctactctacatttgtgttgaccggagcg
tcaggagagaaggtgtacggtgcagcgctgcagttttttgaagtgtatgcagaagagcgt
ttaacagagcatcagagaaaacagctgaacatgacggagtcaaaaaccacacgcgtgaaa
tcctgctccagagccgacacaagctcacctgtagcgtcaggaatcattcacgctaataaa
tgcatctgcgttctgtctcactggccgttctttgaccctttcaagaagtttctgaccttc
ctctaccgttactcggtatctggacctcatgctctgccccttgagaaacacatctcacac
ttcatgcacaacgttccgtttcccagcgcacagagacctcgcattctcctgcagttatct
cctcatgacagcgtgttgttcagtcggccggtcctctgtcctttacctctgagcggtggt
cgtttctgtactcttctgaagcacttgggtcctgagaacacaacctctgtgttgttgttt
gctctgacggagcagaagattgtgatgcactcgacgcaagcggccgtcctcaccagcgtc
gctgaagctctgctgtctatgctcttcccgttgcagtggcagtgtccgtatatcccgctg
tgtcctctctctctgtcgggtgttctcagcgctccctgtccgttcattgtgggtgtggat
tcgcgatacttcgacatctatgaaccaccgctggatgtcatatgtgtggatctggataca
aacaacatctttcgcgctgaagaaacacaagctctgacactgaagatcctgccgaagaaa
gccagaaaaaaacttctgaatgccctcaaagatctctatgtggagatgtctgatggaccc
agagatgatggattgttagatttattcatgtgtgatctggagctcagcagtggacggact
ttccagacggtggagctgaacattcaagaggtgtttctgtgcttcatggctgatatttta
aagggttacaggagctttctgagacccatcatcgatgttccttcagatacagccacagac
gccacatcactgtttgatctacaggggttcgtgagacatcaggactcctcaaaacaaacg
ttttattcattgttgacgaaaactcagatgtttatgcggtttattgaggagcgttcattt
gtcagtgacagagatgccagtctggctttctttgatgaatgcgttgagaagcttcacggc
acagagcaaaacagtgatggagttaagaaggatgaaagtcgactgattgaattggataaa
tcatattgtagtgaacacacagtatttatcagcccacctgaactgcccacctcacctgac
ggagaggaacacatgctgagctacagttatagcggttttccactgttaagaaatgaattg
tttgatcgtgtggtcgactttccaaccagcactaaacagacactaatccaacaaacctgt
ccaacacaaaccgattcaacactcagacggaccaaacaggaattgaagtgggcacagaag
acggctcacaaatattccgccgagcctcatctgtggtccagacgtctgctgtgctgttca
ttcggcctgtggttcatctgtctgccagcgtacatcaaagtgtgtccttcgaaaacacgg
gcgctacacgccgcatacgacacgctgaggaagatgagagagagaacactacagcctccg
gatgaggtgtgttatcgtattgtgatgcagttgtgtggcgagtacggtcagcccgtgttg
gctgtcagggttttgtctcagatgagaaaggccggccttcatcctaatgccatcacttat
ggatattacaacaaggctgtgttggagaacgtctggccgtccggcactcgaggaggatat
ttcctctggtctaaactgagaaatgtgattatggccatcgctcacttgaaaagcggcctg
aagaaacagcagcacgttactttaactcactactcttgtacagagactgtcagtgaccac
ggacctccatcacatcacacacaaactcgttccgcatcaccaccgctttcccatgccaat
ccatcctatcatgacgccggactgctgttctcatcgtctttagaagacatcggtgtggtc
aacagccgttcgtgtagatgtcatcacagatctgttgacaggtccggtgctcaacacgcg
tgccgtgacagctcacacaacacgagagcaaagacgcacagccaggactccagagatccg
gactcgacccccatctttgcctttgaggatctggatttagacaacacaacagatgtagag
atgatgtggactaacagcggtcgctctgaaactcgacgtgcttccagacggatggatgtg
aagacgggctgtgatcctctttctctgctggcctcagagtttgaggaggacacagaatct
tcgcttcaagacaccgtctgcagtccgtctgtcagccgtcacctggcagaagagatcgag
atgtacatgaaacactcctgcagtccgcggagcagccgagcgccgagcgtggacctcggt
gtcgtgtccaatcacagcccgcgtctgatgtctgcatctccaaactcatctgtggggata
gattctctcctccctccatcactggatgttctcaagagcagcgtcatgtctgcaggacga
gaggtggccgagagagccagtcgatggtattcacagtttgctaaagacagtgattcagac
aaacagggcgtgttttcatctgagaaagagaatgatgctgaagatgaagagcactgtgtg
acatcatcatctgttgaccaatcagcatcaccagaacactcatcagcttgtatttttaca
cggcgagactggacctgtgcagatcattctgatcacagagacgacgagcagaactgtgcc
atggaggtgctgatgtcgagctgctcgcgctgtcagacgtgtgactgtctggtgtatgat
gaagagatcatggccggctggacagcagatgactccaatctcaacgcttcctgtccattc
tgtgccaacaccttccttcccttcctgaacatagagatcagagacctcagacagcccggg
aggttgtttctgaaaagcagtccatcagagaagatgctggaacccttcacaccgacatcg
acatcagctcctcatgacagcagcagacagacgaatccagagacacacaacagcagaacc
ttcagacctgtggaggaatccattagatccgttgctacggatcggttgagtttatcctgg
cgtctgcatcatccagagccggtgacgatacagtatctcagtccactggtgctgtggaaa
gaactggagagtttaatagagaacgagggcagtgacatcatctgtcgttcttctgtggtg
gataaacatcccatcatctactggaacctcatgtgttacttcacacgacttcagttacct
agcaacctgacgggactcatactgacctcagaacactgcaacagaggatcacagattcct
cgtgattggatgtctgaggacagcagatatgttgatgttcagctgctctgggacaacatt
aaactacacagagatgaagttcagcctctttatgttctgtggaacacacactcggcaggt
ctcgggtatcccgtgagtcaggctgaagcggagcgtgtgtttgatgaagatctcctgcac
aacatcattcacagcattgagagaaatgatctttattctcctgtgtgtctgatgttaaca
cctgcagaccgacctcagcgagagaggagtttatacagggagcttctgtttctctgtcga
gttactctgggcgaagataacattgacattgatgcgtttgatcgagagtacgagtcagcg
tatgagcggctgactccagatcagatcagacgggctcatgggtgtgatcaaccgcccagc
atgactgtcacagagtgtagaaagacgtttggagagccgtacctgcgtctataa
DBGET
integrated database retrieval system
