Triplophysa rosa: 130552955
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Entry
130552955 CDS
T09216
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552955 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130552955 (spast)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
130552955 (spast)
Membrane trafficking [BR:
tros04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130552955 (spast)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130552955 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
TIP49
Vps4_C
AAA_5
AAA_14
IstB_IS21
Mg_chelatase
MIT
AAA_16
nSTAND3
AAA_24
AAA_2
DUF815
NPHP3_N
ABC_tran
DUF5906
NACHT
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
130552955
NCBI-ProteinID:
XP_057187637
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Position
LG4:26649085..26658397
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AA seq
575 aa
AA seq
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MTSGKGARHRGSARAGGLTCAQVTDETGRGPLDRLRSLIRTLCRIPCSLLWALLLLLSWL
YRPFRRTMAARAKDVGSESCDDTGEQIRNYHKQAFEFISVALQIDEDDKGNKDQAVQGYR
KGISELEKGISIQVTGTGEKADRARRLQDKMTTNLNMAKDRLKLLAKLQAPAEGFSDPTF
LPFSNGNLRPGSGAVSKKKDTIPSQSHPRPKNPPKSSNSAPAAALHRTPSACQTGRTGPQ
NNQKGLCTRGGNRPNSKPSHATTASPQKKRDMKNLKNVDSKLANLILNEIVDSGSSVGFD
EVAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAIAMESNAT
FFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLK
TEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLL
SKHGNPLTQKELNQLARLTEGYSGSDLTSLAKDAALGPIRELRPEQVRNMSANEMRNIRY
SDFIDSLKRIKHSVSPQTLDLYVRWNREYGDTTAV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgggaagggagcgagacacaggggatcagcgcgtgcgggaggactcacctgc
gctcaggtgactgacgaaactggtcgcggtccattggaccggctgcgctctctcatccga
accctctgccggatcccgtgttccctgctgtgggctctcctcttgctcctctcgtggctg
taccggcccttccgccggaccatggcggccagagccaaagatgtcgggtccgagagctgt
gatgacacgggagaacagatccgaaactatcacaaacaagcgtttgagttcatttctgtg
gctttacagatcgacgaggatgataaaggtaataaggatcaagcagtgcaggggtacaga
aaaggcatctctgagctggagaagggcatcagcatccaggtcactggaactggtgagaag
gcagacagggcaagacggcttcaggacaagatgaccaccaacctcaacatggccaaagac
agactgaagcttctggccaaactgcaggctccggcagagggcttctccgaccccactttt
cttcccttctccaacgggaacctgcggccaggcagtggagctgtttctaaaaagaaagac
accatccccagtcaatcccatccgcggcctaaaaacccacccaaatcctccaacagtgct
cctgctgctgccctgcaccgtacaccttcagcatgtcagaccggcaggaccggcccacag
aacaaccagaagggtctctgtacaagaggaggtaacagacctaacagcaaacccagccac
gccacaacagcgtcacctcagaagaaacgagacatgaagaacttaaaaaatgtggacagc
aaactggccaacctcattcttaatgagatagtggacagcggctcttcagtggggttcgat
gaggtagcaggacaggaattggccaaacaggcccttcaggagatcgtgatactgcccgct
ttacgtccagagctgttcacaggtctcagagctcctgctagaggcctccttctcttcggg
ccccctggcaatgggaagaccatgctggctaaagccattgcaatggaatctaatgccact
tttttcaacatcagcgctgccagtctgacctccaaatatgtgggagagggtgagaaactg
gttcgggctctatttgctgttgctagggaactacagccgtcaatcatcttcatagatgag
atcgacagtttgctgtgcgagaggagagagggagagcacgacgccagcagaagactcaaa
accgagtttctcatcgagtttgatggagtgcagtcaggcggtgatgatcgtgtgttagtt
atgggagccactaacagacctcaggaacttgatgaggctgtgctcaggcgattcgctaag
cgcatttacgtggctttacctacagaggagactcgcttgaagctgctcaagaacctcctg
agtaaacatggaaacccattaactcagaaagagctcaaccagttagccaggttgactgaa
ggttactccggcagtgatctgacctcactggctaaagatgcggctctgggccccatacga
gaactgaggcctgaacaagtgaggaacatgtcggccaatgagatgcggaacatccgatac
tctgattttattgattctctgaagaggataaagcacagcgtcagtcctcagacactggat
ctatatgtccgctggaacagagagtatggagacacaactgccgtatga
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