Triplophysa rosa: 130553180
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Entry
130553180 CDS
T09216
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130553180 (samd1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
130553180 (samd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
130553180
NCBI-ProteinID:
XP_057187964
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Position
LG4:complement(30094113..30103299)
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AA seq
714 aa
AA seq
DB search
MDCSASVNKRCAKRATPQYHLKSVASGGFSSQIVHLKRTKWVNAGVERGFRFIPSRALSG
SQLFSVTSETREALGQSQLNQYRNMSEPKYREWILETIDSLRSRKARPDLERICRMVRRR
HGSDPDQTRAELEKLIQEQTVLKVSYKGSISYRNAAKVQRKCRKRTEQADSTSGSGESVA
EQTKHASFNNNGDSAHSLTDQEDCEEKEPESPDPVPQISVSTFGKEEKILPVTSGNSFVS
CGATVRSVGSVKASAPKDKRLIAQAGGNGSSPHRDDGAAVCDASSASTRAEGENALGVGH
EEEGRDEKERKTCSSASSAISRSPSLRNKPSAPPKPKLKVGAKGCRTRCAVEKSADLGDR
LVDAVRSLSERHRGSAATRGHAPLGLKEILVYFSTQSGVPGEKLTRNRVKVVLEREIERG
RLGRTRLGHITLLARGMGAAKPSARLLKSALQDRHLSKKEEVKDEEPMATEGEEDGKAGS
LESKEEDITDGGPTGVDPISTDREVVTDNGTVSTMSTEGKSQPSSFVESSNQCSQQEVDV
GGTEEQTVFAEPEDAGIESGTASPDQLHPNTEDQAIVMSESVTAPSSIAIRNCSGIKLEV
GVSSCLLTPSASPGAAEERGMNEGIGGFVKLETSGVNPIDWTVADVASYFTAAGFPEQAL
AFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRTHFQDDEDFC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggactgcagcgcgagcgtgaacaaaaggtgcgcaaaacgagcaacgccacaataccac
cttaaatcagtcgctagcggaggattctcttcgcaaatagtccaccttaagcgcacaaag
tgggtaaacgcaggcgtagagcgaggcttccgcttcattcccagccgggctctgagcgga
tcgcagctcttcagcgtcacttcggagacgagagaggcgctcggccaaagccaactgaac
cagtaccgcaacatgtcggagccaaaataccgcgaatggatcctggaaaccatcgactcc
ctgcgctcgagaaaagcccgacccgacctggagaggatctgccgaatggtccgaaggaga
cacgggtcagacccggaccaaaccagggcagaactagaaaaactgatccaggagcaaact
gtgctcaaagttagctacaaaggctcgatttcgtaccgcaacgccgcgaaagtgcaaagg
aaatgccgaaagaggacggagcaagccgacagcaccagcggcagcggcgagtcggtggct
gaacaaaccaaacacgccagttttaataacaacggcgacagcgcgcacagtctcacggac
caggaggactgcgaggaaaaagagcccgagagccctgatcccgtcccccaaatctccgtc
tccacttttggaaaggaagaaaagattttgccagtaactagcggaaacagttttgttagt
tgtggcgcaacggtacgctccgtggggagcgtcaaagcaagtgcaccgaaagacaagaga
ttaatcgctcaggcgggggggaacggctcctctccccaccgcgatgacggggcggctgtt
tgcgatgcttcaagtgcgagcacacgggccgaaggagaaaatgcgctcggcgttggccac
gaggaggagggcagagatgaaaaagaacggaaaacttgctcgagcgccagttcggccatc
agcaggagtccgtctctgaggaacaagccctccgcgcccccgaaacccaaactcaaggtg
ggagcaaaggggtgcaggacgcgctgcgcggtggagaagagtgcagatctgggcgataga
ctcgtcgacgcggtccgaagtctgtccgagagacaccggggctccgccgcaacacggggc
cacgcgccactgggactgaaggagatactcgtttacttcagcacgcagagcggggtgccc
ggcgagaagctgacccgcaaccgcgtcaaagtggtgctggagcgtgagatcgagcggggt
cgactcggcagaacgcggctcggccacatcactcttctcgcgagggggatgggggcggcc
aagccgtccgcgcgactcctgaaaagcgcactgcaggacagacatctctcgaaaaaggaa
gaggtgaaggatgaagaaccaatggcgacagagggggaagaggatggaaaagcgggaagt
ttagaaagcaaagaagaggacatcactgacgggggtccgacaggtgttgacccaatctca
actgacagggaggttgtgaccgataatggcaccgtctcaacaatgtcaactgaggggaaa
tcccagccatcttcatttgtagagtcatcaaaccaatgctcccaacaggaagtagacgtg
ggtggaactgaagagcagacagtgtttgctgagcctgaggatgctggtattgagagcggt
acagcttcacctgatcaactacatcctaacacagaggatcaggcaattgtgatgtcagag
agtgtaacggctccatcatcaatagctataagaaactgttcaggaattaagctggaagtg
ggagtttcatcatgtctgctgactccgtctgcctccccaggagcagctgaagaacgaggg
atgaatgaaggaataggcggctttgtgaagctggagacaagtggcgtgaatccgattgat
tggacggtagcagatgtggccagctacttcactgcggctggattccccgagcaagccctt
gccttcaggacacaggaaattgatggaaaatccctcctcctcatgcagaggaacgatgtg
ctaacaggcctgtcaatcaggcttggtcccgcccttaagatctatgagcgtcatgtcaaa
gttcttcagaggacccacttccaggacgacgaagatttctgctga
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