Triplophysa rosa: 130553366
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Entry
130553366 CDS
T09216
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130553366 (prom1b)
04090 CD molecules [BR:
tros04090
]
130553366 (prom1b)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130553366 (prom1b)
CD molecules [BR:
tros04090
]
Proteins
130553366 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Claudin_2
SH3_14
Tweety
GARP
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
130553366
NCBI-ProteinID:
XP_057188269
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Position
LG4:complement(11683206..11715731)
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AA seq
917 aa
AA seq
DB search
MDMLWRVGIVLVMTWGLTGSETHEPRRDSSPRTAMLRAPVETLDFGFVPSVVYETHAYYE
PGAIGILFQMVHAFLYVVQPNPFPKDLIVKVLQQNKGGLKLEDFKKPENVVLLLQSIYYE
IGFIVLAVVGLLFVMLMPMVGLCFCVCRCCENCGGEMHQRHKKNADCQRGFYMATLIATS
IFLAAGVAVAYTANQNITSQIKSTRRFVSTNIRDLKSFANYTPVQIDYLAAQYTTTKNKV
LSDIDNIGTLLGGRVHNQLEREVVPALDNALRMTGVKMEGAIKAMREAKEALESMTTSLE
TLQEGTGKLQNSLQSERASLSNTLNDPACSNGDVTHICNTIRGTLGQLALSANFHGLPDV
EAHLANLDAVLKTDLSNIVQKGYSSFNDTPRLVTEQTKEIVSEAKGLLDKSGVEIIGFTK
MFPVEPALENFTKFLTDSQKNIEAFYPQIDQIDFYRWIGCVVICCMVVLVLAFNFLGLLC
GSCGYDKNATPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFVVAGNVEKLVCEP
LANRQLFKIIDTPYLVHPAKNNFIPGMLFQDPNIDLTLGSIYRDCHENYGLYSALQLEKN
FNFNRFLNVTVYNQELAKIFNSVNVDLHGIVLLDQEGKDNLIGFANTGIGEINFQAYLTE
VNKATTVVDLLFYANELEAQADLLPRGALENALKGHASSIKQIHKEQVVPMEQAMKFVKA
RSTLSRSIRLLQTSSRELPTKVTNVLSAIEAAEYLISNNASHVVRQETNKFIKNIVGYFT
QYTDWVRHSLEMEVAQCKPIANMVDSLEIVACSFIVDSVNTFWFGLGGCCLFLIPSIILC
VKLCKFYRRMDTEDVFDDSMDIIVSDYHNDPLYGINNPVMNSMNLYPLSIVLVRCMRVSA
LIHIEPGCVSAIHPMTQ
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacatgttgtggagagtgggaatcgtgctggtcatgacctggggtctcacgggtagc
gagacccacgagccgcggcgggattcttctccgcgcaccgcgatgctcagagcgcccgtg
gaaacgttggactttgggttcgtgccgtcggtggtgtacgaaacgcacgcctattatgaa
ccgggtgccatcggtattcttttccaaatggtccacgcgtttctgtacgtggttcaaccc
aacccttttcctaaagatctcattgttaaggttttgcagcagaacaagggaggactcaaa
ctggaggacttcaagaagccagagaatgttgtattattgctacagtcgatctactatgag
attggctttatagtcctggcagtagtggggctgttgtttgtgatgttgatgccaatggtg
gggctgtgtttctgtgtgtgccgctgctgtgagaactgcgggggtgaaatgcatcaacga
cataagaagaacgcagactgtcagcgtggcttctacatggccacactcatcgctacctcc
atcttcctcgcagcgggagtggcagtcgcctacacagcaaaccagaacatcacttctcag
attaaaagcaccagacgttttgtcagcaccaacataagagacctgaaatcatttgccaac
tacacaccagttcaaatagactatcttgctgcgcaatacacaacaaccaaaaacaaagtg
ttatcagacatagacaatatcggaactctgcttggtggacgtgttcataaccagctggaa
agagaagtggtaccggctttagataacgctcttcgcatgacaggagttaaaatggagggt
gctattaaagccatgcgcgaggctaaagaagctctggagagtatgacgacgtcactggag
accctgcaggaagggacgggcaaactccagaactctctccagtctgaacgtgcttctctc
tcaaacacactcaatgacccggcctgttccaacggagacgtaacacacatttgcaacacc
atccgtggaacgcttggccagctcgctctcagcgcaaactttcatgggttgcctgatgtt
gaggcccatttggccaatctggatgctgttcttaaaacagacctcagcaatattgtacag
aagggctattcttcctttaatgacacaccaaggttagtcaccgaacagacaaaagaaatt
gtgtcagaagcaaaagggctgttggataaatcaggtgtagagatcattggcttcacaaag
atgtttcctgtggaaccagcacttgagaacttcaccaagttcctgacggacagccagaag
aacattgaagcgttttacccccagattgaccagatagacttctacaggtggattgggtgt
gttgtgatttgctgtatggttgttctggttttggcctttaatttcctggggctgctgtgt
ggatcgtgtggctacgataaaaacgctacgccaaccacacgtggctgtctgtccaacacc
ggaggaaatctgctgatggcttctgtcggcttcagcttcatcttctcctgggtgctcatg
ggagttgtagtcactacatttgttgtcgcaggaaacgttgagaagcttgtgtgtgagcca
ctggctaacagacagctatttaagatcatagatacaccgtatttggtccatcctgccaaa
aataactttattcctggcatgctgtttcaagatccaaacatcgacctcacccttggtagt
atatacagagattgtcatgagaattatggtttatattcagcactacaactggagaagaat
ttcaactttaacaggtttctcaatgtcacagtgtataaccaggaactggctaaaatattt
aacagtgtaaatgtggatctccacggaatagttctcctggaccaggagggcaaagataac
ctcatcggctttgccaacacaggcatcggggaaatcaactttcaggcttatttaacagag
gttaataaagcaacaacagttgtggatctcctgttttacgccaatgaacttgaggctcaa
gcagacctactgccacgaggggctcttgagaatgcattaaagggtcatgccagcagcatc
aaacagatccacaaagaacaagtggtgcctatggagcaggccatgaaatttgtgaaagca
aggagcactctaagtcggagcatcagactgcttcagacatcatccagagaattgcctact
aaagtgactaatgtactgagtgccattgaagcagcagagtatctcatctccaacaatgcc
tcacatgtggtccgacaggagactaataaattcataaagaacattgtgggctactttaca
caatacacagattgggtcaggcactcgctggagatggaagtggcccaatgcaaacccatc
gcaaacatggtggactcgctggagattgtagcatgcagcttcattgttgactcagtgaac
acattctggtttggtctgggaggatgttgtctgtttctcattcccagcatcattctttgt
gtgaaactctgcaaattttaccgcaggatggacactgaagacgtctttgatgatagtatg
gatattattgtcagtgattatcataatgatcccctatatggcataaacaaccccgtgatg
aacagcatgaatctttacccactgagtatagttcttgtccgttgcatgagagtttccgct
ctcattcacattgaacctggatgtgtttcagctatccatcctatgacacaatga
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