Triplophysa rosa: 130553411
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Entry
130553411 CDS
T09216
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tros00535
]
130553411 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tros00537
]
130553411 (gpc6a)
Proteoglycans [BR:
tros00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130553411 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tros00537
]
Others
130553411 (gpc6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
TOP_N
MRP-S23
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
130553411
NCBI-ProteinID:
XP_057188345
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Position
LG4:complement(2020971..2172512)
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AA seq
561 aa
AA seq
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MSRTPVVIFTSLCLLFFTLSCAGDVKSRSCGDVRQAYAVKGFSLHDVPHQEIPGEHLRVC
SQGYTCCTSAMEERLGQQSKQEFDRLVEESSHTIRTTFTSKHKKFDEFFLELLDNSEKSL
NDMFVRTYGKLYTHNSEMFEDLFSELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
TFTDDYLECISKYTDQLKPFGDVPRKLKAQVTKAFIAARSFVQGLMVGREVANRVARVNI
SPACSKALTRMLHCPYCGGMPELKPCANYCQNVMRGCLANQADLDPEWNLFIDAMLLVAD
RLEGPFNIEAVMEPIDVKISEAIMTMQDNSMQVSEKVFQGCGHPRPAGVGRSARGISDVF
NSRFRPYSPEERPTTAAGTSMDRLRIVWRTMQHSVIDIKEKLKQSKKFWSALPDGICEED
KVTDPDEEQCWNSHTKGRYFPEVVKDGLTNQLNNPEVEVDITRPDTFVRQQIMTLRVMTN
KLRNAYNGKDVYFQDSSDEESGSGSGSGFTTEPEVVHTEPPMVEADISEPQPAADAARRQ
TPQVQIVIAVTALVSLVLQWR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggacacctgtcgtgattttcacttctctgtgtcttctcttctttacgctgtca
tgtgccggagatgtgaaatcgcgcagctgcggcgacgtgcgccaggcgtacgcggtcaag
gggttcagtctacatgatgtgccacatcaggagataccaggtgaacatctgcgagtttgt
tctcaggggtacacctgctgcacctcagcgatggaggagagactcggccagcagagcaaa
caggagtttgacagattagtagaagagagcagccacaccatacggaccacgtttacctcc
aaacacaagaagtttgacgaattcttcctggagttgctggacaactcggaaaagtcactc
aacgacatgttcgtgcgcacgtacggcaaactctacacgcacaactcggagatgttcgag
gacctgttctccgagctcaagcgctattacacgggcgggaacgtcaatctggaggagatg
ctgaatgacttctggtccagacttctggagagaatgttccagctgctcaactcacagtac
accttcactgatgactatctggagtgcatcagcaaatacaccgaccagttaaaacccttc
ggagacgtgccgcgtaagctcaaggctcaggtcaccaaggccttcatagcggcgcggtcg
ttcgttcaaggactcatggtgggtcgggaagtggccaacagggtggccagggtcaatata
tcaccggcgtgcagcaaagcgctgaccagaatgttgcactgcccgtactgtggaggaatg
ccagaactcaaaccctgcgccaactactgccagaacgtcatgagaggatgtctggccaac
caggccgacctcgatcccgagtggaacctcttcattgatgccatgctgctggttgccgat
cggctggagggacccttcaacatcgaagccgtcatggaaccgatcgatgtgaagatctca
gaagccatcatgaccatgcaagacaacagtatgcaggtctcagagaaggtttttcaggga
tgtggtcatcctagaccagcaggagtgggccgatcggcccgcgggatctcggatgtgttc
aacagtcgtttcagaccgtacagtccagaagagcggcccaccacggcagcggggacgagt
atggacagactgaggattgtttggaggacgatgcaacacagcgtgatcgacataaaggag
aagctgaagcagtcgaagaagttctggtcggctcttccggacggcatctgtgaggaggat
aaagtgaccgaccctgatgaggagcagtgctggaacagtcacactaaaggaagatatttt
cctgaagttgtgaaagatggtcttacgaatcagctgaataacccagaggtggaggtggac
atcaccagaccggacacgttcgtccgacagcagatcatgaccctcagagtgatgaccaac
aagttacggaatgcttacaacgggaaagacgtctactttcaagattcaagtgatgaggag
agcggttcgggcagtgggagtggcttcacaacagaacccgaggtggtgcacacggagcct
ccgatggtggaagccgacatcagcgaacctcagccggcggcggacgcggcccgccgacag
accccgcaggtgcagatcgtaatcgccgtgaccgcgctcgtctcactcgtactgcaatgg
agataa
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