Triplophysa rosa: 130553434
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Entry
130553434 CDS
T09216
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130553434 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130553434 (dhx15)
03009 Ribosome biogenesis [BR:
tros03009
]
130553434 (dhx15)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130553434 (dhx15)
Spliceosome [BR:
tros03041
]
Complex A
U2 snRNP components
U2 related factors
130553434 (dhx15)
Complex B
130553434 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130553434 (dhx15)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
90S particles
Helicases
130553434 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
nSTAND3
AAA_25
SRP54
Flavi_DEAD
DUF3915
AAA_29
SR-25
Motif
Other DBs
NCBI-GeneID:
130553434
NCBI-ProteinID:
XP_057188376
LinkDB
All DBs
Position
LG1:complement(35859747..35885554)
Genome browser
AA seq
768 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRDRDRDRERDSKSSSASL
SSSVSLSSSVSSGVGMIPLKQAAMQQQINPFTNLPHTPRFYEILKKRLQLPVWEYKERFN
DILNRHQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVAD
EMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTL
ATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEP
ERDYLEASIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIP
LYSTLPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNL
GSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPL
DPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTL
LNVYHAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYI
NIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYI
RTCTDIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgacatcgcttggatttaggcgacgattattcgtcaagcaaaaagagatcg
tctgacggtaaagaccgtgacagagatcgtgacgagagatcgaaggatcgtgaccgcgac
cgtgacagagatcgtgatcgggacagagagagagacagcaagagttccagtgcgtccctc
agctccagtgtgtccctcagctccagtgtgtccagcggtgtagggatgatccctctgaag
caggcggccatgcagcagcagatcaaccccttcaccaacctgcctcacaccccacgcttc
tacgagatcctcaagaagaggctgcagttgcccgtttgggaatataaagaacgctttaat
gatatcctcaaccgtcatcagagctttgtgctggttggagagacaggttctggaaagact
acacagatccctcagtggtgtgtagacatggtgagggcccttcccggcccgaagcgtggg
gtcgcttgtactcagccacgtagggtggcagccatgagtgtggcccaaagagtggcagat
gaaatggatgtcatgctgggacaggaagttggatactctatcagatttgaggactgtagc
tctgcaaagaccatactgaaatacatgacagatggtatgttacttcgtgaggctatgaac
gaccccttgctggagcgttacggtgtcattattctcgatgaggctcacgagcgcacgcta
gccacagacattctgatgggtgtactgaaagaggtggtgcgtcagaggtcagaccttaag
gtcatcgtcatgagcgccaccctggatgctgggaagttccaggtttatttcgacagctgc
cccttgctcactattcctggccggacgcatcccgtagagatcttctacacgcccgagccg
gagagggactacctggaggcgtcaattcgcacggtcatacagatccacatgtgtgaggaa
gacgagggagatgtactgctcttccttaccggacaggaggaaatcgatgaagcctgcaaa
cgaatcaaacgtgagatcgacgacctgggccctgacgttggagacatcaaaatcatccca
ctgtactccaccctgccaccacaacaacagcagaggatcttcgagccgcctccacctcgc
aaaccaagcggagccatcggcagaaaggtcgtggtttctacaaacatcgccgagacgtcc
ctgaccatcgacggcgtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtat
aacccacgcattcgagtcgagtcgcttctggtaacggctataagtaaggcttcagcccag
cagagagcgggccgtgccggacgtacgcgccctggcaagtgtttccggctgtacactgag
aaagcctacaagactgagatgcaggataacacgtaccctgagattctccggtccaatttg
ggctctgtggtgctacagctgaaaaagctggggattgatgatctggtgcactttgacttc
atggacccaccagctcccgagacgctgatgcgagcccttgagctgttgaactatctggcg
gcgctgaatgacgacggggacctgacggagctgggctccatgatggccgagttccctctc
gacccccagctggccaagatggtcatcgccagctgcgagttcaactgctccaacgagatc
ctctccatcaccgcaatgttatcagtcccacagtgctttgtgcgccccaccgaggctaag
aaggcagcggacgagtccaaaatgaggttcgcccacatcgacggggaccacctgaccttg
ctcaacgtctaccacgccttcaaacagaaccacgagtctgtgcagtggtgctacgataac
ttcgtcaactaccgctcgttgatgtctgccgataatgtgcggcagcagctctcgcgtatc
atggaccgcttcaacctgccacgtcgcagcacggagttcaccagccgagattactacatc
aacatccgccgtgctctcgtcaccgggttcttcatgcaggttgctcacctggagcgcacg
ggacactatctaacggtgaaggacaaccaggtggtccagttgcacccttccactgtactg
gaccataagccagagtgggttctctacaacgagtttgtgctgaccacaaagaactacatc
cgcacctgcactgatatcaaacccgaatggctggtgaaaatcgctccacaatactatgaa
atgggcaactttcctcagtgtgaagctaagaggcagttggagcgcatcgtcgctaaactt
caaaccaaggaatactctcagtactaa
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