Triplophysa rosa: 130553469
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Entry
130553469 CDS
T09216
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130553469
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Other domain-containing proteins
FERM domain-containing proteins
130553469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_f0
PDZ_2
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
130553469
NCBI-ProteinID:
XP_057188424
LinkDB
All DBs
Position
LG4:11107575..11134189
Genome browser
AA seq
1761 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRESTSRERVLEEGQAAENGSQEQRSCPIRVTM
KIPLDPTLNSHGFTVSTHTPHQVLDVTEGGPADGKLVPGDQLIRINNVAVDDLSTEQAAD
IIRECRDTVLLTVMRYTVGPKSSFITPEKRAKLKTNPVKVRFAEEVVVNGQSQGNSLLFL
PNVLKVYLENGQTKAFKFEPKTTVKDIVMTLKEKLSITHIGHFSLVLEQQYSTCKLYLLH
DEETIQQVAEKKETHDYRCLFRVCFLPKDFENMLKDDPIAFEYLYLQSVSDVLQERFAVE
MKCNTALRLAALHVQERLASSTQSLKTPLKAVMKEWGIESFVSHTLLRNMREKDLKKAIS
LHMKKLLSQEPKQKVISVNQARLNFLNEISQLKTYGGKAFSATMMLQDRESMVSLLVGAR
YGMSQVINHKLSIMTTLTEFNCITRVELLPESERVSLVKIYLQDIKPITLLLESAAAKDL
LCLVAGYCKLLVDPLICVFPWPTNSKSHRISAEEGYVSHCGSDSEDSDTDMDALLAHVAS
TTKNNQTAVNPSDNLLRETEKESQMEKEEEEGDKEKEEEEMEKNSEREDKDTICEVINSN
NGEMSNNMNDEKGETEKEDKKQENKLEEPQFVIIVDDPSSEASDSCQTDSRFMTSMSSDS
MDALEEDDLLTYFSARRPCHLPVTESYCNEDTLSLSPGQLHSKDVYSLSEMCSTDSNCES
DVDQFYCFAALSNIAECLPSPPEASDEEECEELGVEKIKHKKGSPAKLPGSALPPPGDYV
FSFEQGDTRHYYNICSSVTPDSARSLPRPLSSPGSRKRQMDQESGKANDMETVPIYHPPP
GFGDSSSDDEFFDAQERFTLLEELAAKAKANSTQPSTKIRTNKTGICHSEQGTEDLENNG
KEEEVQKKKEWSRFQKRSKKRRSFMETNYTSLVSFPEEDQSGNSYGNSISNLGSISINHG
TGRIACFDGGCSDQGPCLTVLSLTNSEGEPAQLESKPIQPSKPNGSPLYSPTDTKAGSHS
NKAYQRKQQLIEMESESMECKSVTELMSSVSPTIVVVRSHVGLQDKGNTSNNDRDNQERD
AVGGLAERLLGGHLLLDPSRETRDNSASSEDQASKQKECLFQGISVSQKCSSLPRLGQIT
QSCVPCFQVPRISYTTSPNIRGDINNGTLSLDFGRGKDSMAPTERMRSHSLSSGNDGPHC
LPRSLFSQREPESDESDSTCDPFMQELSSGISVVKPAQNFLLTPCSSGILGRLSASTLRG
KIQNLPLYLSRSQEMLNANSTTSGKVKPVRRLSESQLRTNEVEVAKEATEDITSNEGISD
VTEVKVVTIVSEEVTEFIEEVREVSHINPQLCGKQKNKTNPKEFPAIATSPVGPGAQLSP
SDSLQVSPSTVVVTTQNLNVPWGVASSREISGLQECTCSPSNTTPHHFISSCGVFTNCRL
KPTIAQPLSLPRPYQQQKPDLSCSSVLAVGCEKVMESAQTPLEACQTVYTNCFSGVLDSA
TFDDELTVYEFSHRMNQAETENALLMSVPPSSLSASPASFSPSSPLPSFPHVLPPSSSAE
LSLLLSPLDTSDCFLSDPHEDAITALLTRRYPLPPTGFLSLQRDVDTLLNILVGAMKNQD
GVQEHSRETCVDHFSKNKRRLHVEARGLLAGCQRVVRVGQTPEETLQSLSESFRSLVQMT
SVCLCFSSCQRCRERHAQALTGLADLAKTFQDFARAAELLGSSTERNTCHELSIKLLARQ
CTSLTTSVFCLTQLFRTLTAL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggaccgcagtcgctcaccgtctcgcagaaccagcagagtagaacaggtg
gtgggacgctggcttcgccgctccagggagtctaccagccgagagcgtgtgttagaggaa
gggcaagctgccgaaaatggctctcaggagcagaggagctgtccgattagagtcaccatg
aagatcccacttgaccccaccctgaactcccacggctttacagtgtctacacacactcca
catcaggtgctggatgtaacagaaggaggtcctgcggatggaaagcttgttcctggtgac
cagcttattagaataaataatgttgctgttgatgatctatccacagagcaggctgctgac
atcatcagggaatgtcgggacacagtactattgactgtcatgagatatactgtggggcca
aagtcatccttcataaccccagagaagagagccaagctgaagacaaacccagtcaaagtg
aggtttgcagaagaagtggtggtcaatggtcaatcacagggtaactctttgctgttcctg
cccaatgttctgaaggtctacctggagaatggccagacaaaggcttttaaatttgaacct
aaaaccaccgttaaggacatagtgatgaccctgaaagagaaactctcaatcacacatatc
ggacacttctctctcgtgctggaacaacaatatagcacctgtaagttatatctactgcac
gatgaggagaccattcaacaggtggctgagaagaaggagactcatgactataggtgtctg
ttccgtgtttgttttctgcccaaagactttgagaacatgctcaaggacgaccccatagct
tttgagtatctatacctacagagcgtgagtgatgtattgcaggaaaggtttgcagtggag
atgaaatgtaacaccgctctcagactggctgcgttacatgtacaggagagactagccagc
agtacacaatctcttaaaacaccactaaaagccgtcatgaaggagtggggcattgaaagc
tttgtatcccacaccttactgcgaaacatgagagaaaaagacttgaagaaagccatcagt
ctccacatgaaaaaacttctctctcaggagcctaagcagaaggtgatctcagtaaaccaa
gctagactgaacttcttgaatgagatatctcaactgaaaacatatggaggaaaggctttc
agtgccactatgatgttgcaggacagagagtcaatggtgagtttgttggtgggagctcga
tacgggatgagccaggtgatcaatcacaaactaagcatcatgaccacactaactgaattc
aactgcattaccagagtggaactattacctgaatctgaaagagttagcctggtcaagatc
tacctgcaagatataaagccaattaccttgttgctggaatcagcagcagctaaagatctg
ttgtgtttagtggctggatactgcaaacttcttgtggaccccctgatctgtgtttttccc
tggccaactaattcaaagagccaccggatatcagcagaggagggttatgtgtcacactgc
ggcagtgactctgaagactcagacacagacatggatgctcttttggctcatgttgctagt
actaccaaaaacaaccaaacagcagttaaccccagtgataatctactcagagaaaccgaa
aaagaaagtcagatggaaaaagaagaggaggagggggataaagagaaagaagaggaggag
atggagaagaacagtgaaagggaggacaaagacaccatctgtgaggtgataaattctaac
aatggagagatgtcgaataatatgaatgatgaaaaaggggaaactgaaaaagaagacaaa
aaacaagagaacaaacttgaagaaccacagtttgtcattattgtggatgatccttcatct
gaagcatccgattcatgccagacggattcacgtttcatgactagcatgtctagtgactcg
atggatgccctagaggaggacgacctcttgacttacttctctgccagacgcccatgccac
ttaccagtgacagagtcttactgcaatgaagacacactatcactatctccagggcaactg
cacagcaaagatgtttattcccttagtgaaatgtgctctactgattcaaattgtgagtct
gatgtagaccaattctactgttttgctgcactatcaaatatcgctgaatgtcttcccagt
ccacctgaagcaagtgacgaagaggaatgtgaggaactaggagtagagaaaataaagcac
aaaaaggggtcacctgcaaaacttcctggaagcgcccttcctcctcctggagactatgtg
ttttcatttgaacaaggcgacacaagacactactacaatatttgctccagtgtcacccct
gacagtgcccgcagccttccacgacctctttcttctccaggttctaggaaaagacagatg
gatcaggaaagcgggaaagctaatgacatggaaacagtgccgatttatcatcccccacca
gggtttggagacagcagttcagatgatgagttctttgacgctcaggaaagattcacattg
cttgaagaactcgctgcgaaagcaaaagcaaattctacacagccaagcaccaagatacgc
acaaataagactggaatctgtcacagtgaacaaggtacagaagacctagaaaataatgga
aaggaggaagaagtgcagaaaaagaaggaatggtcaaggtttcaaaaaagatccaaaaag
cgccgctcattcatggaaacaaattatacatccctagtatctttcccagaagaggaccag
tcaggtaacagctatggaaacagcatctcaaacttgggttctatatcgatcaaccatggc
actggacgaattgcatgttttgatggtggctgctcagatcaaggtccatgtctaactgtc
ctatccctaaccaattctgaaggagaaccagcacaattggaatccaaacccatacaacca
tcaaaacccaatggttcaccactctatagtcctacagatacaaaagctgggtcacattca
aacaaggcatatcaacggaaacagcaacttatagagatggaatcggagtccatggagtgc
aaatcagtcacagaactaatgtcttctgtatcaccaactatagtagtggtacgttcccat
gtggggctacaggacaaagggaacaccagcaacaatgacagagataatcaggagagggat
gcagtaggaggtttggctgagagattgcttggaggtcatttgttgcttgacccatctaga
gaaacacgtgacaatagtgcatcatctgaagatcaggcatccaaacaaaaggaatgttta
ttccagggcatatcagtgagccaaaagtgcagctcactgccaagactaggccagataacc
caatcatgtgtgccctgctttcaagtcccacgtatatcatatactacaagcccaaatata
cgtggtgacataaacaatggtactctaagtctagattttgggcggggaaaagactcaatg
gcgccaacagagaggatgaggagtcacagtctatcttctggaaatgatggaccacactgt
ttgccaaggtccttattttcccagagagaaccagaatctgatgaaagtgacagtacctgt
gacccattcatgcaagaactgtcttctggcatttcagttgttaaaccagcccaaaacttc
cttctcacgccctgttcatctggcatccttgggcgactctctgcctcaacattacgggga
aagattcaaaacctccccctctacctatcacgctctcaggaaatgctaaatgctaattct
accacaagtggtaaagttaagcctgtgagaaggctttcagaatcgcaactaagaacaaat
gaagttgaggtagcaaaagaggcaactgaggatataacttcgaatgaaggcatttctgac
gtaaccgaagttaaagtggttactattgtatctgaggaggtcactgagtttattgaggag
gtaagagaggtaagccacataaatcctcaactgtgtggaaagcagaaaaacaaaactaat
cccaaagagtttcctgcaatagccacatcacccgtgggtccaggggcacagctttctccc
tcagactctctccaagtaagcccttcaaccgtagtggttaccacacaaaatctaaacgta
ccctggggggtggcatcatccagagaaattagtggattacaagaatgtacctgctctcct
tcaaacacaaccccccatcactttatctccagctgtggggttttcacaaactgccggttg
aaacctaccatagcccagccactgtccttgcccagaccctatcagcaacaaaaacctgac
cttagctgtagctcagtattggctgtggggtgtgagaaagtaatggaaagtgctcagaca
ccactcgaggcttgccaaacggtatacacaaactgtttcagtggagtcctagacagcgct
acctttgacgatgaactaacagtctatgagttttcccacagaatgaaccaagcggaaaca
gagaatgccctgctgatgtctgtccctccttcctctctctctgcatctcctgcatctttc
tcaccatcctctccattgccgtcatttcctcatgtcctgccaccttcttcttctgctgag
ctcagtctccttctatcccccctggataccagtgactgttttctgtcggaccctcacgaa
gatgctatcactgccctgctgacacgtcggtatcctctaccaccaacaggattcctttct
ttgcaaagggatgtggacacacttttaaatatccttgtaggtgctatgaagaaccaagac
ggggtccaggagcactccagggaaacctgtgtggatcatttttcaaaaaataaaagacga
ttgcatgtggaagctcgggggctgttggctggatgtcagcgcgtggtgagggtcggacag
acacctgaggagacacttcaatcactgtctgaaagcttccgctcactggtacagatgacc
agcgtgtgtttatgcttctccagctgccagcggtgcagggagcgccatgcccaagcactt
acaggactagcagacttggcaaaaacgtttcaggactttgctcgagcggcagaactactt
ggaagttcaactgaaagaaacacttgccatgaactcagtattaaactccttgctcgccaa
tgcacttcactaacaacctcagttttctgcctcacccagctttttcgcactctcactgcc
ctttga
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