KEGG   Triplophysa rosa: 130553510
Entry
130553510         CDS       T09216                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tros03041]
    130553510 (smu1b)
Spliceosome [BR:tros03041]
 Complex B
  Other components
   Complex B specific factors
    130553510 (smu1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_EML WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_Vps41 Ge1_WD40 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_WDR19_1st VPS8_N PROPPIN LisH LisH_WDR26 LisH_PAC1 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 130553510
NCBI-ProteinID: XP_057188499
LinkDB
Position
LG4:29347379..29362416
AA seq 606 aa
MNTTAARVLGGDHVSSDAHRNAGECGISHPDGDFIDIGAVMDVEVESADVIRLIMQYLKE
NNLHRTLAMLQEETTVSLHTVDSIDSFIADITNGHWDIVLLSIQYLKLPDKLLIDLYEQI
VLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSHTETLLTKPYFDSEKAYPAGSSKEK
RRQAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQETKALRQFGSLAMLSLKWQQH
QGLLPPGMSLQLFRGKGALKDMEEERFPTQLSRLIKVTLSILTHVEISWDLDICLHVCTC
VIQFGPKSHVECARFSPDGQYLITGSVDGFIEVWNFSTGKIRKDLKYQAQDNFMMMDEAV
LCLAVSHESDMVASGAQDGKIQVWRILNGQCLRKFERAHGKAVTCVCFNKDSSQLLSASF
DQIIRLHGLKSGKMLKEFIGHKAHVNDVIFSHGGQHVISASADGTVKIWSMKTMDCTHTM
KTPAIPEGTDITVNNVALVPKTPDHFVVCNRTNTVVVTNIHGQVMRSFCLGVREGAEFVC
CTLSPRGEWIYCVGEDYVLYCFSTITGKLERTLTIHEKDVIGITHHPHQNLIATYSDDGL
LKLWKP
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgaatacaacagcagcacgtgtattgggcggcgatcacgtgtcttcggatgcccaccgc
aacgctggtgaatgtggcatatcgcatccagacggtgatttcatcgacatcggcgcagtc
atggacgttgaagtggaatctgcagacgtaattcgcctgatcatgcagtatctgaaggag
aataatctgcaccgcacgctggcgatgcttcaagaggagacgaccgtgtccctgcacacg
gtggacagcatcgacagcttcattgcggacatcaccaacgggcactgggacatagtgctg
ctctcgatccagtacctgaaacttccggacaaactgctcattgatctctatgaacagatt
gtactagaattgatcgagttgggagaactaggggcagcccagtgtttactgaagcaaaca
gaccccatgatcatgctgaagcacacacaacctgagcgctactcgcacacggagactcta
ctcaccaagccttactttgactcagagaaggcgtatccggcaggcagtagcaaagagaag
cgcagacaggctatcgctcaagcttttgcaggagaggtctgtttggtgccaccctcacgt
ctcatggctctgctgggccagggtcgtatatgtgaaggggctctttacagattacaggaa
accaaagcactaaggcagtttggctcattagcaatgctgtctttaaagtggcagcagcat
cagggacttttacctccaggcatgtcattgcaactgttccgtggcaaaggtgcattgaag
gacatggaggaagaacgcttcccgacacagctgagtcgccttataaaggtgaccctgagc
atcctcacgcatgtagagatatcgtgggacctggatatctgtttacacgtgtgtacgtgt
gtgatacagtttgggccgaaatcccatgttgagtgtgcacgcttttcccctgatggacag
tacctgatcactggatctgttgatggtttcattgaggtctggaacttcagcacgggtaaa
attcggaaggatctgaaataccaagcccaagacaatttcatgatgatggatgaggccgtt
ctgtgtctggcagttagtcacgaatcagacatggtcgcctctggagcgcaggatggaaag
atacaggtttggaggattttgaacggccagtgtctgcgaaagttcgagcgagctcacggg
aaggcagtcacctgcgtctgctttaacaaagacagcagtcaactgctcagtgcctccttt
gaccagatcatcagactacatggcttgaaatcaggaaaaatgctgaaggagttcataggc
cacaaggctcacgtaaacgatgttatcttctcacacggcggtcagcatgtcattagtgca
tcagcagacgggacggtgaagatctggagcatgaagacaatggattgcacccatacgatg
aaaacccccgccattcccgagggtacggacatcacggttaacaatgtcgctctcgtcccg
aaaactccggatcactttgtggtgtgcaatagaaccaacacggtggttgttacgaacatt
catggccaggtgatgaggagtttctgtttgggggtgagagagggggcagagtttgtctgc
tgcacgttgtctccgcgtggcgagtggatctattgcgtgggagaggactatgtgctgtac
tgcttcagcaccatcactggcaaactggagagaaccctcacgatccatgaaaaagatgtg
atcggcattacccatcaccctcatcaaaatcttatcgccacatacagtgacgacggtctg
ctcaaactctggaagccctga

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