Triplophysa rosa: 130553646
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Entry
130553646 CDS
T09216
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b isoform X1
KO
K04683
transcription factor Dp-1
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
tros04110
Cell cycle
tros04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130553646 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130553646 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130553646 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130553646 (tfdp1b)
03036 Chromosome and associated proteins [BR:
tros03036
]
130553646 (tfdp1b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
130553646 (tfdp1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
130553646 (tfdp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
130553646
NCBI-ProteinID:
XP_057188708
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Position
LG4:3110247..3119515
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AA seq
397 aa
AA seq
DB search
MAKDGGLKEASSEIKVFVNQNLSPGKPGGVYSLLTFHPASVAAVKQILPKTLSATGHAVV
PHVVISTPQRASAPPGNLLTSPCTPTAQFQTPQTQPQDSSPWSTGRGRKGDKNGKGLRHF
SMKVCEKVQKKGVTSYNEVADELVTEFSSADVGISPNDAQVYDQKNIRRRVYDALNVLMA
MNIISKDKKEIKWIGFPTNSAQECRDLETERLRRLERIKQKQAQLQELILQQIAFKNLVQ
RNRQLEEKNNRPPPPNTVIHLPFIIVNTSKKTIIDCSISNDKFEYLFNFDNLFEIHDDVE
VLKRMGLAFGLESGRCTPEQLKIARSFVPKALQPYVTEMAQGAINQPTGGLSFVAVDRAA
SSSNGSHISSSRVETPSSYVEDEEEEEEDFDENDDED
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatggtggtctgaaagaagccagtagtgagattaaggtgtttgtcaaccaa
aacttaagtcctggcaaacccggaggtgtgtattccctcctgacgtttcaccccgcgtct
gtcgctgcagtcaaacagattctgcccaaaacactctctgctacaggccatgctgtcgtg
cctcatgtggtcatcagcactcctcaaagggccagcgccccacccggtaacctgttaact
agtccatgcacgcccactgcacagttccagaccccacagacccagccgcaggactcttca
ccatggtccactgggcgcggcagaaagggcgataagaacggcaagggcctgaggcatttc
tccatgaaagtgtgcgagaaggtgcagaagaagggggtcacgtcgtataatgaagtggca
gatgagctggtgacagaattcagttcggcagatgtgggcatctcaccgaacgacgcgcaa
gtgtacgatcagaagaacatcaggcggcgggtttacgacgctctgaacgttctgatggcc
atgaacataatctccaaagataagaaagagatcaaatggatcgggttccccaccaactcg
gcgcaggaatgccgggacctggagacggagcgtctgagacgactggagagaattaagcag
aaacaggctcagctgcaggagcttatactgcagcaaatagcctttaagaatttagtgcag
agaaaccgacaactggaggagaagaacaacagacccccacctccgaacaccgtcatccac
ctgcccttcatcatagtgaacaccagcaagaaaaccatcatcgactgcagcatctccaac
gacaagttcgagtatctctttaatttcgacaacttgtttgagatccacgatgatgtggag
gttctgaagcgcatgggtctggcattcggcctggagtcgggccgctgcactccagagcag
ctgaagattgccaggtctttcgtgcctaaagccctgcagccatatgtgaccgaaatggca
caaggagcaataaaccagccgacgggaggactttcatttgtggcagtcgaccgcgccgcg
tcgagctcgaacggatctcacatcagcagctccagggtggaaactccttcgtcctacgtg
gaggatgaagaggaggaggaggaggactttgatgagaatgatgatgaagattag
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