Triplophysa rosa: 130553664
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Entry
130553664 CDS
T09216
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130553664 (lrba)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Others
Others
130553664 (lrba)
Endosome - Golgi transport
130553664 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130553664 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
SUKH_6
EIF3I
TMEMspv1-c74-12
Motif
Other DBs
NCBI-GeneID:
130553664
NCBI-ProteinID:
XP_057188742
LinkDB
All DBs
Position
LG4:complement(12323029..12585996)
Genome browser
AA seq
2830 aa
AA seq
DB search
MASAGDSAVGIPIRGIRMKFAVLAGLLEAGEVSNRDTVETIFNLLVGGQFDLEMNFIIQE
TESIICMVELLDKCDSTCQAEVWSMFTAVLKKSLRNLQACTEVELIQLVLQRIDQVDAMI
ADLLVDMLGVLASYSITVKEFKLFFSKLKGEQGQWPPHAVKLLSVLKSMAHRNGPDSFFS
FPGKSAAAIALPPIAKWPHQNGFTFHTWLRLDPINNINVDKDKPYLYCFRTNKGLGYSAH
FVGGCLVVTSLKSKSKGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSELSCYVNGELASYG
EITWFVNTSDTYDKCFLGSSETADANRVFCGQMGAVYLFSEALSAAQILAIYHLGPGYKG
TFKHKAESDLMLAEHHKMLLYDGKLSSCISFTYNPRATDAQLCLESSPKDNVSIFVHSPH
ALMLQDVKAVVTHSVQSAIHSVGGVPVLFPLFAQLDYLQHTGDKLDTSVCCTLLSFVMEL
LKGSVAMQEQVLACKGFLVIGYSLEKSSKVHVTRPVLDIVLAFARYLSNLPTGVLLLKQL
CDHILFNPTIWIHAPAKVQLVLYTYLATEFISTVTIYNAIRRVGTVLQVMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHGIKEDELQSILNYLLTMH
EDDNLMDVLQLLVALMSEHPGSMVQAFDQRDGIRVIFKLLASKSEGIRVQALKVLGYFLK
YLSPKRKLEVMLGHGLFSLLTERLMLHPSQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
STVKIQNPQILKVMAALLKNTPPGAESMEVRRIFLSDMIKLFNNSRENRRSLLQCSVWQE
WMLSLCFINPKNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEQH
KENLALMFREYQRMGSEGSDIRIRTISGVSQDSELRVSANGELRAEETAPSTVIELRVEV
ADQPTDSEERHNQVSVPVSNILAQEEDERGADTPANPSETQEVEEENAAKEAGEDEMRNK
EDNLEPEANLDGEHVETERVENDMKTEKDYGKDIAHVDEKDGTNDADDQQIAMEKNENVE
NEAVKTSDEGKMNEVSAQAEDCSPEVGKETEVVETTEASSEKNKDDAEQQDERKQKEMET
KQEEKSLEKDTMETDPSKEEETKDAPAPMVEVDLNRSTSTEESTEGTNTELQAAASQPEQ
TTEVCPVEASTTEIKPVASIAQDAGSNQDPSTAAVTESSATKAKEIKIARLDVSSVASDT
ERLELKQTSTTNVSPNQAPVSDSSGQGNEGSSSGRSTMFRIPEFKWSHMHQRLLTDLLFS
IETDVQMWRSHSTKTVMDFVNSSENVVFVHNTVHLVSQVVDNLIMACGGILPLLSAATSS
THELENIEPSQGLAVEASLMFMQRLTNLVDVLIFASSLNFAEIEAEKNMSSGGILRQCLR
LVCAMAVRNCLECQQHTLGMSGAESSRGQQSLLGAAKSIPAQSPVDIITGGMSPIRDLDR
LLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKHVERTH
SNRSTESVQSDLENGLSPCRQDSSIKKDKTSITPSDGETQAGPDAVSEALSTLSSEVRKG
QEVAEKDSKGKNVNVKDILRSLVSAPSDDIMVDLSLLPPTFLGAAGDVTRDQSVQFHSFD
RSVVVAPKTMGRTLSPEASTVSASASIPSASATSSASSGGTPDNSVSVVSSGEAVPSTES
ATGGTSTSTNLPSVPALSPMTQSSAPSMSISERLEHALEKAAPLLREIFVDFAPFLSRTL
LGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSH
TMKDHLVRVANEAEFILSRQRAEDIHKHAEFESHCAQYAAEKRDEEKMCDHLIRAAKYRD
HVTSTQLIQKIVNILTDKHGAWGSAAISRPLEFWRLDYWEDDLRRRRRFIRNPFGSSHSG
ATLKAAAEHAPEEDVLKGKQSIRSSVLGNQNSETELLLEDDDTLSSLDDKELENLTGPVN
LSTSAQLVAPAVVVKGTLSITALELYFEVDEEDPSFKNIDPKILAYTEGLHGKWLFTEIR
AVFSRRYLLQNTALEIFMANRTAVMFNFPEAAIVKKVVHSLPRVGVGTNFGLPQTRRISL
ASPKQLYKASSMTQRWQRREISNFEYLMFLNTISGRTFNDLNQYPVFPWVITNYESEDLD
LTLPSNYRDLSKPIGALNPKRAAFFSERYETWEDEQVPKFHYGTHYSTSSFTQMWLLRME
PFTTFFLNFQGGKFDHADRTFSSVARAWRNCQRDTSDVKELIPEFFYLPEMFVNSNNYNL
GVMDDGTVVSDVELPPWAKSPEEFVRYNRLALESEFVSCQLHQWIDLIFGYKQQGPEAVR
SLNVFYYLTYEGAVNLSSISEPMIREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLL
QTPLMFTEQMQQDVIMVLKFPSNSPVTHVAANTQPGLTNPSVITVTGNRLFAVNKWHGLT
GHQGSSVQDQQYQLPLEIDPLIANNVGIHRRQISDLLDQSIQINAQCFVITADNRFILLC
GFWDQSFRIYSTDTGKLTQIVFGHLDVVTCLARSESYIGGDCYMLSGSRDATLLLWYWNG
KNSSIGENPGTEFVTPRAILTGHDCEVTCASVCAELGLVISGCREGPCLIHSMNGDLLRT
LEGPDGCVLPRLVLASTEGHCVIYYDKGHFCVFSINGKLLGHMEVEDNIKAMLLSKDGQY
LLSGGDGGVLTVWQIHDLKKLFTYPGCDAGIRSMAMSHDQRCIISGMASGSIVLFYNDFN
RWHHEYQTRY
NT seq
8493 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgccggtgacagcgctgtcgggataccgatcagaggtatccgcatgaagttc
gctgttctggcggggctgctggaggctggagaagtctccaatcgggacacagtggagacg
atcttcaatctgttggtcggggggcagtttgacctggagatgaacttcatcattcaagag
acggagagcatcatctgcatggtggagctgctggataagtgtgactccacgtgccaggcg
gaggtgtggagcatgttcacggcagtgctgaagaagagtttacgtaacctgcaggcctgc
actgaggtcgaactcatccagcttgtgcttcagcgcatagaccaggtggacgctatgatc
gcagatctgttggtggacatgctgggtgtgctggccagctacagcatcacagtaaaggag
tttaagctgttcttcagtaaactgaaaggagaacaaggccaatggccaccccacgctgtc
aagctactgtctgtgttgaagtccatggctcacagaaatggcccagattcgttcttcagc
ttcccagggaagagtgctgcggccattgctcttcctcccattgcaaagtggccacaccag
aacggcttcaccttccacacctggctgcgcctggaccctatcaataacatcaacgttgac
aaggacaagccttatctctactgcttccgcaccaacaaaggtttgggctactcggcacac
tttgtgggaggttgtctagttgtgacctctctaaagtccaaatccaaaggcttccagcat
tgcgtgaagtacgactttaaaccccagaagtggtacatggtgaccatagtgcacatctat
aatcgctggaagaacagtgaacttagctgctatgtcaatggagagttggcatcctatggc
gagatcacctggtttgtcaacacaagtgatacatacgacaagtgtttcctgggctcgtca
gagacggcagacgctaaccgtgtgttttgcggtcagatgggggccgtgtatctgttcagt
gaagctctcagcgccgctcagatattggccatctatcacctgggacctggatacaagggc
acgttcaagcacaaggccgagagtgacctgatgttagcggaacaccataagatgctgctg
tatgatggaaagctgtcctcctgtatctccttcacctataacccccgagccacggatgct
cagctgtgtctggagtcatcgcccaaggacaacgtctccatctttgtgcactcgccacac
gccctcatgctgcaggacgtcaaggctgtggtgacgcactcggtccagagcgccattcac
tctgtaggaggagttccagtgctctttcccctgtttgcacagctggattacctccagcac
actggagacaagctggacacctccgtctgttgcacactactgtcattcgtgatggagctg
ttaaagggctctgttgctatgcaagagcaggtgctggcctgcaagggctttctcgtcata
ggttactcactggagaagtcttccaaagtacacgtgacccgacccgtgctggacatagtc
cttgcctttgcccgttaccttagcaacctacccactggtgtcttgttgctgaaacagctg
tgtgaccacatcctgttcaaccccaccatctggatccacgccccagctaaagtgcaattg
gttctttacacctacctagcaactgaattcatcagtaccgtcaccatctacaacgccatc
cgcagagttggaacggtactgcaggtcatgcacacgctcaagtatttctactgggttgta
aacccattggaccgcagcgggatcacacccaagggtctcgatggccctagacccaatcag
aaggagattcactctctccgagcattcctactgctgtttgtcaaacagctcataatgaag
gatcacggcataaaggaagatgaactacagagtattctcaactacctgctcacaatgcat
gaggatgataatctgatggacgttctccagcttctggtagctctgatgtccgagcatcct
ggctcaatggttcaagcctttgaccagagggacggaatacgggtcatctttaagcttctg
gcgtccaaaagtgaaggaattcgcgtgcaggcgctcaaagtcttgggctactttctcaaa
tatttgtcaccaaagagaaagttggaggtcatgctgggtcacggcctgttctctctgctc
accgagcgattgatgctccaccccagccagttcactgtcacaacatacaatgtgctgttt
gagattcttacggagcagatctgtactcaggtcattcacaaacagcacccagaccctgac
tccaccgtcaagattcaaaacccacagatcctgaaggtgatggctgcgcttttgaagaac
actcctccaggagccgagagcatggaggtacgacggatcttcctctcggacatgatcaaa
cttttcaacaacagcagagagaaccgcaggagtctgctgcagtgctcggtctggcaggaa
tggatgctgtctctgtgcttcataaaccccaagaacagcgaggagcagaagatcacagag
atggtgtacgccatcttccgcatcctcctttatcatgccattaagtacgagtggggtggc
tggcgcgtgtgggtggatacactctccatcacacactccaaggtcacttttgagcaacac
aaagagaatctggcccttatgtttcgagagtaccagaggatgggttctgaaggatctgac
atcagaataagaacgatctctggggtcagccaggattctgagctccgtgtctctgccaat
ggtgagctgcgtgcagaagaaacggctccatctactgttattgagctacgggtagaggtg
gccgatcaacctacagacagcgaggagagacacaatcaggttagtgtccctgtctccaac
atactggcccaagaggaggacgaaagaggggctgatacacctgcaaacccatcagagaca
caggaagttgaagaagagaatgctgcgaaagaagcaggagaggatgaaatgagaaataaa
gaagacaatctcgaaccagaggctaacttggatggggaacatgtggaaacagaaagagtt
gagaatgacatgaagactgaaaaggattatgggaaggacatagcacatgttgatgagaaa
gatggaactaatgatgcagatgatcaacagattgcaatggagaagaatgagaacgtagaa
aacgaagctgtgaagacgtcagatgaaggcaaaatgaatgaagtcagtgcacaggcggaa
gattgctctcctgaagttggaaaggaaactgaggtggttgaaaccactgaagcttcttct
gagaagaataaagatgatgctgaacagcaagatgaaagaaagcagaaagagatggaaacc
aaacaagaagagaagtcattggaaaaagacacgatggagactgatccatctaaggaagag
gaaaccaaagacgccccagcacccatggtagaggtggatttaaaccgaagcacctccaca
gaggagtccacagagggtacaaacacagagttacaagccgcagcgagccagccagagcaa
acaacagaagtgtgtcctgtagaggcttctacgacagagattaaacctgttgcgagcatc
gcgcaggatgcaggaagtaaccaagacccttccacagcagcggtgactgagagctctgca
actaaagccaaagagattaaaatcgctagactggatgtgtcaagcgtggcctccgacacg
gagagactagaactgaagcagacctccacaactaacgtgagcccaaatcaggcacctgtc
tcagattcatcaggccagggcaacgagggctcgtcttcaggacgctccaccatgttccgt
attccagagtttaagtggtcacacatgcaccagcgtcttctgaccgacctccttttctcc
attgagacagatgtacagatgtggagaagtcattccactaagacggtaatggatttcgtg
aacagcagtgagaatgtggtgtttgtgcacaacaccgttcatctggtctctcaagtggtg
gataatctgatcatggcctgtggaggaatccttccactactttctgcagccacatcctct
acgcatgagctggagaacattgagccgtctcagggtttggctgtggaggcttcactgatg
tttatgcagaggttgaccaatctcgtggacgtactgatctttgccagctcgctcaacttc
gctgagatcgaggcggagaagaacatgtcctctggaggcatcttaagacaatgtctacgc
ttggtgtgcgcgatggctgtgagaaactgtctggaatgtcagcagcacactctgggtatg
tctggtgcagagagcagccgtggacagcaaagccttctgggagccgccaagtctatacca
gcacagagtcctgtggacatcatcacaggagggatgtctcctatcagagatttagaccgg
ctcctacaggacatggacatcaatcgtcttcgtgctgttgtgttcagagacatagaggac
agtaaacaagctcagttcctggcactggctgttgtctacttcatctctgtgctcatggtg
tccaaatatcgtgacatcttggagccgcacaatgacaagaaacacgtggaacgaacacac
tctaacagaagcacagaaagtgttcagtctgatctcgagaacggtctgtctccctgccga
caagattcaagcatcaagaaagacaagacctccatcacccctagtgatggcgagacacaa
gccgggccggacgctgtttccgaggccctgtccaccttgtcctctgaggtcagaaagggt
caagaggtcgcagaaaaagacagcaaagggaagaatgtgaatgtcaaggatattttgaga
agcctcgtcagtgcgccgtctgatgacatcatggtggatctcagcctcttaccgccaacg
tttttgggtgctgcgggtgacgtcacccgtgatcagtccgtccagttccactctttcgac
aggagtgttgtggtggcacccaaaacaatgggcaggactctctcaccagaagcaagcaca
gtctccgcctctgcatccatcccatcagcctctgctacctcttctgcatcatcaggtgga
acaccagacaacagtgtgtcagtggtgtcctcaggtgaagctgttccgagcacagagtct
gccacaggaggaacctccaccagcaccaacctgccatctgtccctgccttatccccaatg
acccagagctccgcccccagcatgagtatctccgagagattggagcacgctctggagaag
gccgctcctttactccgagagattttcgtggattttgcaccgttcctctctcgcacactg
ttgggcagtcatgggcaagagcttctcatcgagggcacgagtctggtgtgtatgaagtcc
agcagttctgtggttgaactggtcatgctgttgtgctctcaggagtggcagaattccatc
cagaagaacgcgggcttggctttcatcgagctcgtgaacgagggcaggctgctgagccac
accatgaaggaccatctggtgcgtgtcgctaatgaggccgagtttattctgagccgccag
agagcagaggacatccacaaacacgccgagtttgagtctcattgtgctcagtacgccgct
gagaaacgcgatgaggagaagatgtgcgatcacctcatcagggctgccaagtaccgagat
cacgtcacgtccacccagctcatccagaagatcgtcaacatcctgacagacaagcatggc
gcctggggcagcgccgccatcagcagaccgctggagttctggcgcctggactactgggag
gatgacctgaggagacgtcgacgcttcatcaggaacccgttcgggtcctcacactctggg
gctacgctcaaggctgcagcagagcatgctccagaagaagacgtgctgaaaggcaaacag
tccatcaggagttcagtgctggggaatcagaactcagagactgagctgctcctggaggac
gacgacacactctcatcgctcgacgacaaagagctggagaacctcacagggcctgttaac
ctgagcaccagcgcacaactggttgcgcccgctgtggtggtaaaaggcacgctgtctatc
actgccctggagttatactttgaagtggacgaggaagacccaagctttaagaacattgat
cccaagatcctggcctacacagagggtctgcatggaaaatggctgttcaccgagatcaga
gcggttttctcacgccggtatctgctgcagaacaccgcgctggagatcttcatggccaac
agaacggcagtcatgttcaacttcccagaagcagccatagtaaagaaggtggtgcacagt
ctccccagagttggagttggcaccaatttcggccttccccaaaccagacggatttctctg
gccagccctaaacaactgtacaaggcgtctagcatgacccagcgctggcagagacgagag
atctccaactttgaatacctcatgttcctcaacaccatctctggtcgtacatttaatgat
ctgaaccagtatcctgttttcccttgggtaataaccaactacgaaagcgaagatctggac
ctcaccctgcctagcaactacagagacctgtccaagcctatcggtgcactcaacccaaag
agggctgcgttcttttcggaacgctatgaaacttgggaggatgagcaggttcccaaattc
cactacggcacacattattccacctccagcttcactcagatgtggctgcttaggatggag
cctttcaccacattcttcctcaatttccaaggtggaaaattcgatcacgctgatcgtact
ttctcctctgtggctagagcctggagaaactgccagagggacacatctgacgtgaaggag
ttgatccctgagttcttttacctcccagagatgtttgtcaactccaataattataatctg
ggagtgatggatgatgggacggtggtgtcagatgtggagcttccgccgtgggccaagagt
cctgaggagttcgtgcgctacaaccgacttgctttggagagcgagtttgtttcctgtcag
ctgcatcagtggattgatctgatatttggctacaagcagcaaggacctgaggccgtcaga
tctcttaatgtcttctattacttgacttatgaaggagcagtcaacctcagctccatatct
gaacccatgatcagagaggcagtggagtctcaaatcagaagtttcggacagacgccctgc
cagctgctaatcgagccccaccccccacgcagctctgccatgcaagtgtatctccttctg
cagaccccactgatgttcacagagcagatgcagcaggacgtcatcatggtgctgaagttc
ccatccaactcgcccgtcacacatgtggccgccaacacgcagccaggcctcacaaacccg
tccgtcattacagtcaccggcaaccgcctcttcgctgtaaacaagtggcacggcctcact
ggtcaccaaggctcctctgtccaggaccagcagtaccagttaccgttggagattgatcct
ctgatagccaataatgtgggcattcacaggaggcagatttcagatctgttagatcagagt
atccagataaacgcacagtgtttcgtcatcacggctgacaaccgcttcatcctgctgtgt
ggcttctgggaccagagcttccgcatctactccactgatacaggtaaactgacccaaatt
gtgtttggccaccttgatgtcgtcacctgtctggcccgctccgaatcgtacatcggcgga
gactgttacatgctctctggctccagagacgccacacttcttctctggtactggaatggc
aagaacagcagcatcggagaaaaccctggaacagagtttgtgactcctcgagcgatcctg
acgggtcatgactgtgaggtgacgtgtgcgagcgtgtgtgcagagcttggactggtcatc
agtggctgcagagagggtccgtgtctcatccactccatgaacggtgatctgctgaggact
ctggaaggccccgacggctgtgtgctgcctcgtctggttctggcttctactgagggtcac
tgcgtcatttattacgacaagggccacttctgtgtgtttagcatcaatggaaaactcttg
ggacacatggaagtggaagacaacatcaaggcgatgttgctgagtaaagatggacagtat
ctgctatctggaggcgatggaggagttctcactgtttggcagattcatgatctcaagaaa
ctcttcacgtacccaggatgtgatgcgggaatacgctccatggctatgtcacatgaccaa
agatgcatcatcagcggtatggcgtctggtagcattgtcctcttctacaatgacttcaac
agatggcaccatgaataccaaactagatactga
DBGET
integrated database retrieval system
