Triplophysa rosa: 130553894
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Entry
130553894 CDS
T09216
Symbol
cpdp
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130553894 (cpdp)
Enzymes [BR:
tros01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
130553894 (cpdp)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130553894 (cpdp)
Prokaryotic type
130553894 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
130553894
NCBI-ProteinID:
XP_057189095
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Position
LG5:16612404..16619095
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AA seq
552 aa
AA seq
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MLHIRFCSTRECIRYSRVLLGAIRGPIQSQRCITMPGNKPNLKRKKESPSSADGKQPKLA
RVKAGKRDREPGWLEAEVVQLRREAQGCEFNKKRLRYLSDCQKIKQGSDGVLYWMFRDQR
MQDNWALIYAQQLALTEKLPLHVCFCLVPRYMDAAYRQYAFMLKGLREVAKECKGLDIQF
HLLSGEPGQNLPTFVKEWNFGAVVTDFNPLKISLQLNETVKQDLPSDIPFIQVDAHNVVP
CWEASGKLEYGARTIRGKITKLLPEFLTEIPPVDTHPHTASRAAKPIDWEKVLSSLEVDR
SVGEVDWAHPGTSGGMAMLESFIDQRLRLFATHRNNPNSDAVSNLSPWIHTGQLSSQRIV
MQVKQEKSFSESVASFTEELVVRRELADNFCFYNPNYDNISGAYEWAKKTLQDHAKDRRT
YIYTKEQLENSETHEQLWNAAQRQLVLEGKMHGFLRMYWAKKILEWTASPEEALSIALYF
NDHYSLDGCDPNGFVGCMWSICGIHDQGWAERPIFGKIRYMNYAGCKRKFDVPQFEKKYA
ATETSKKHGTSL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgctacatattagattctgttctacgcgtgagtgcatcagatacagcagagtgctgctt
ggtgccatcagaggtccaatccagtcccaacgttgtatcaccatgcctggaaacaaaccc
aacctaaaacgtaagaaagagtcaccgagcagcgccgatggaaagcagccgaagctcgca
agagtgaaagcggggaagagggacagggagcccggctggctggaggcggaagtggttcag
ctccgcagagaagcacagggatgcgaattcaacaagaagcgcctccggtatttgtctgac
tgtcagaaaatcaagcagggatctgatggggtgctttactggatgttccgggatcaacga
atgcaagataactgggcgctgatctacgctcagcagctcgcgctgactgagaaacttcct
ctgcacgtctgcttctgtctggtgccacggtatatggatgcagcttaccgacagtatgcc
tttatgttgaaaggattgcgagaagtggcaaaggaatgcaaaggcctggatattcaattc
catctattgtcaggagagcctggacaaaatctgccaacctttgttaaagaatggaacttc
ggggcagtggtgactgactttaaccccctcaaaatctctcttcagttgaatgaaaccgtt
aaacaagatcttccctctgatatacctttcattcaggttgatgcacataatgtggtacca
tgctgggaagcatctgggaagctggaatatggagccaggactataagggggaaaatcacc
aaacttctcccagaattcctcacagagatcccgcctgtggacacgcacccccacactgct
tctcgtgcagcaaagccgatagactgggagaaggtgctgtcatctcttgaggtggaccgg
agtgttggagaggtggattgggcccaccctggcacctctggtggtatggccatgcttgag
tcctttattgatcagcgtcttcgtctctttgccacacacaggaataatcccaactctgat
gctgtcagcaatctgtcaccgtggatccacactggtcagctgtcctctcagcgcatcgtg
atgcaggtcaagcaggagaagagcttcagcgagtctgtggcgtcatttacagaagagctg
gttgtgcgccgggagctcgctgacaacttctgtttctacaatcccaactatgacaacatt
tcaggtgcatatgaatgggcaaagaagactttgcaggaccacgctaaagaccgccggacg
tacatttacaccaaagagcagctggagaacagcgagacccatgagcagctgtggaatgca
gcacagcgacaactggtgctagaaggaaagatgcatggcttcctgcgcatgtactgggcg
aagaagatcctggaatggactgcatcccctgaagaagccctctctattgccttatatttc
aatgatcactattccttggatggatgtgaccccaatggatttgtgggttgcatgtggtcc
atctgtggcattcatgaccagggctgggcagagaggcccatttttgggaaaatccgttat
atgaattatgccggctgcaagaggaagtttgatgtgccgcagtttgaaaagaaatatgct
gccactgagacttccaaaaaacatgggacatcgttatag
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