Triplophysa rosa: 130553926
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Entry
130553926 CDS
T09216
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130553926 (chd7)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130553926 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
130553926
NCBI-ProteinID:
XP_057189189
LinkDB
All DBs
Position
LG5:complement(10333675..10386061)
Genome browser
AA seq
3145 aa
AA seq
DB search
MADPGIMSLFGDDGNLFSDELESLGDCGYPQGQSNPMSQQMPHEHQGYGQLSSSLHLSSP
AVPGQAKLGHHFDHFNQYEQPKMHPMDQQGNRMMGNGPVNGMSSPHSRYHGAPAGAGGAG
GHHVYPGAQGDGHSQSFPDAGNAWGSQAIPVPEQARPPFPQQPPQPASHQHGPAGPQGHA
HQMGSFIGRGEYAMQGHNQTQTPPRMNHFPQGLPQEASHFIGHVGIAQNPSMSGPAMRHP
AQPSQQHQQSNQQFLHRPGQGPVHPESVAGHNPQFPQSPSRQQQQQQQQVMGGRPLQNMG
FNMHNQPVPSNTINSSGQYPPYPSYGNLNQGLANTSGMSPNLSLTTSSNSNPNAPVSQVQ
RYPAQTGPQRYQTPGPQQGPMHQQPIHVNQINAQPMHPTQNQATAQQKLQQQHLPPPSQG
SYASPPSMSPMRNLATPAGTPPPQQARPPSAGLATDVGGYPGVPHQSQGPMAHSQRGSGP
MNAAQQHPHQQLPSHPSHPQQHPHPPPAQMYAALSPNHRATSAQGRPPAGPGTNHTESPQ
DQRLLSQQAQQQQLQTPPLPFQQQQVHTPPTIPPSQTHLAAHHQSSPPSQQAWAPPHQSP
PSMQKVPHMQHSPSDTSLEMVTPSKTPASGLNLQPANCDIEQMESELKPKKKKKKKAKSS
EGQQVNDISGEAEGASFLVNDGDGVMTAMDQSAVEKKSKKKPKEKEPKEPKEPKTPKTQK
TPKTPKEPKEPKEKKVKTATPKPKSSKKPSAKKSDSESSNSTKKDAKRKREPSVTSDVEK
TPPHSPEEEEDDGIQKRRSSRQVKRKRYTEDLEFKISDDDDDSPGPKSPTTSEQQEMPDA
EGPVVEKIMGMRMGKKELDSGEELEVEQFFVKFKGFSYLHCRWADIEELEKDKRIQQKIK
RFKAKQVFNNFLTEMDDEPFNPDYVEVDRVLDVSESTDENGELVTLYLVKWCSLAYEDST
WELKADIDQGKIEEFERVMAREPELKRVERPPASDWQKSENSREYKNSNALREYQLEGVN
WLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGICSPYLVIAPLSTIPNWEREFRT
WTELNVVVYHGSQASRKTIQAYEMFYRDSQGRVIKGAYKFHAVITTFEMILTDCPELRSV
PWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLHFLEPDRFP
SEITFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKQETIIEVELTNVQKKY
YRAILEKNFAFLSKSGGGGGGGGGGGGGGGSSNVPNLLNTMMELRKCCNHPYLINGAEEK
IMEEFRDSHPTDHPDFHLQAMVQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILED
YLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIF
DSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG
RENAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEG
KGSTFAKASFVSSGNRTDISLEDPDFWQKWAKKAELDLDVLHGRNNLVIDTPRVRKQTRH
YSSMKEDELVEYSDLESDSEDKPIQKPRRPQDRTQGYPRSECFRVEKNLLVYGWGRWGDI
LSHGRFKRPLRERDVETICRALLAYCLLHYRGDENIKSFIWDLITPTEDGQSRTLTNHSG
LSAPVPRGRKGKKGKMQASQPHMPQADWLVDCNPDILLQEDSYKRHLKHHCNKVLLRVRM
LYYLRQEVIGDQADRILEGTDSSELDIWIPQPFHAEVPTDWWDVEADKSLLVGVFKHGYE
KYNSMRADPTLCFLERVGMPDAKAIAAEQRGADMMADGIEGEDEDPEYKPLRMTFKDDLD
DFTNSPLDDGIDGEGGEAPRPGENGKTGNLYWPPASALTARLRRLITAYQRTHKREQLRQ
EAMTKPDRRRRRPRDDILSMVTEGGAYVSEGAVAYLAEGSPFMAKGSPFIPDSAALLADG
AAYFKERRQRWTRREEADFYRVVSTFGVVYDIHKQCFDWSQFRAFARLDKKTDESLEKYY
YSFVAMCKRVCRMQVKAETELPDPTLIIDPITEERASRTLYRIELLRRIREQVLLHPLLE
ERLSLCQPSPDLPAWWEPGRHDRDLLRGAAKNGVSRTDYHILNDPELSFLEAHRKFTQGK
GAELPIIPDPLTPLALVKEEEVKEDPGDVVMAKVQNGDTVDEVKEKTTEALSPKKEVKIE
TANDLSLKQEPKEEKIEVEEKEEMTTKAEQVSFEDGMAEEKPMDQQLTLPTCQDKNTQGE
EKPLSTTESKLSTDKTSEDDDDEEEKMDEDDKSEKSSQAEAGAASERKNFDEESNASLST
ARDETRDCFSVDDVEPSASQMFSEHSLFSFWPKDRVMINRMDNICEAVLKGKWPSNRRQF
FDFPGLLPGYSSMATDSPLQRRSLGDLSMVGQASLSGSEDLTMSPQVNKDEALSLSVPRQ
RRRRRRKVEIEAERAAKRRNLMEMVAQLRESHSAEGQAQAMDLTKALHGMSATSSTTFPR
AMASSAALKAQMELLQAGASSRPRANGSLLDSELPNRRKRGRRKNVEGLELLFMGNKRAP
LNADNSDATKAFLDGAHMPRQAHRHLSSPAQKAPGDGLEEGSHLKGEDGPSTKDLREWLK
RHPTYTMDMSGFLPKNEDHLLSQFTKPKQKRHRCRNPNKIDINTLTGEERVPVVNIRNGR
KMGGAMAPPMKDLPRWLVENPEFAISPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRR
RGRRPKSEIAKAAAQAAAAAAASTSGVNPLLMNGLFGGMDLTSLQGLQNLQGLQNLQSLQ
LAAGLMGFPPALGGGADAKHAAAMLPLMLPGMGGLPNMFNLGGLFGGNLVAAASATNGAS
GTEQAESEEKPKPKKDEESKEEKENDKEAEKAMCETESDEATGDAAALNAAAAASAGMST
TPLAFNPFLLSTMAPGLFYPSMFLPPSLGGLGLPGYPQASLADLQSAVSGALGATGDDKE
SGKEARADQDQNASTADVETADNTLEDSDSEESQNKTADSSVLDDDLAGPAEDSMEGGMD
DDDDDDDDDDDDDDDDPADEDDKSD
NT seq
9438 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaggcataatgagccttttcggggatgacgggaatctgttctccgatgag
ctggagagcctgggggactgtggctacccacaaggtcagtcaaatcccatgagtcaacag
atgccccatgagcaccaaggttatgggcagctctcctcttctcttcacctctcctctcct
gctgtccctggacaggccaagcttggccaccattttgaccacttcaatcagtacgaacag
cccaagatgcatccaatggaccagcagggaaaccggatgatgggaaatggaccagtaaat
ggcatgtcatcacctcattcccgctaccatggtgctccagcgggtgctggaggtgctgga
ggccatcatgtctacccaggtgcacaaggagatggacatagccagtcattcccagatgct
ggaaatgcatggggctctcaagcgataccggtccccgaacaagctcgacccccttttccg
cagcaacctccacaacctgcttcccatcaacatgggcctgctggaccacagggccatgct
caccaaatgggctcttttattggccgtggtgaatatgccatgcaagggcacaaccagaca
caaacacctccaagaatgaaccactttccacaaggcctccctcaggaagccagtcacttc
attggtcacgtgggcatcgcgcagaatcccagtatgtcaggacctgccatgcgccaccca
gcacagccttctcaacagcatcagcaatctaatcagcagtttctccacagacctggccag
ggcccggttcatccagagtctgtggctggtcataacccacaatttccacaaagcccctca
cggcagcaacaacaacagcagcagcaagtcatgggcgggagacccctccaaaatatggga
tttaacatgcacaaccagccagtcccttccaacaccataaacagctcagggcagtaccct
ccctatccttcgtacggcaaccttaatcagggattagccaacacttcagggatgagtccc
aatttgagccttaccaccagcagcaacagtaaccctaatgcgcccgtgtcccaggtgcag
cgctaccctgcccaaacagggccccagcgctatcaaacacctgggccccaacagggacca
atgcaccagcagcccattcatgtgaaccaaatcaatgcccagcctatgcatccaactcag
aaccaggctacagctcaacaaaagctgcagcaacagcatctaccacctccatctcaggga
tcgtatgcttccccaccttctatgtcaccaatgagaaacttggctacccctgcgggtact
cctccaccccagcaggcccgcccacccagcgccggtttagcaactgatgtgggtggctac
cccggtgtgccacatcaatctcaaggcccaatggctcattcccagagaggatctggccca
atgaatgcagcacagcagcatccccatcagcagctgccatcacatccctcacacccgcag
caacatccacatcctccacctgcccaaatgtatgctgctttgtcacccaatcatagggcc
acaagtgctcaaggaagacctccagcagggcctggtacaaaccacacagaatcaccacaa
gaccagaggctgctctcccaacaagcccaacaacagcagctgcagacgcccccattgcct
ttccagcagcagcaggtgcacacccctcccacaattcccccatcacagacacacctggct
gcacaccaccagagctctcctccatctcagcaggcatgggcacctcctcaccagtcgcct
ccatccatgcagaaagtgcctcacatgcagcattctccatcagacacttctttggagatg
gtaacaccaagtaagacacctgcttcaggcctgaacctccaaccagccaactgtgacata
gagcagatggagagtgagctcaagccaaaaaaaaagaaaaagaagaaagccaagtcaagc
gagggccagcaagttaatgatatcagtggtgaagctgaaggagcatcgtttctggtaaat
gatggagatggtgttatgactgccatggatcagtctgccgttgaaaagaagagcaagaaa
aaaccaaaggagaaggagcccaaggagccaaaagaacccaagactcctaaaactcagaag
actcccaagacacccaaagaacccaaggaacctaaggagaaaaaagttaagaccgccact
ccaaagcctaagagctccaaaaagcccagtgctaagaaatctgactctgagtccagtaac
agcaccaagaaagatgcaaagcgcaagagagagccctcagtcacctccgatgtggagaag
acacctccgcattcaccagaggaagaggaggatgatggtatacagaaaagacgatccagt
cggcaagtgaagaggaagcgctacaccgaggacctggagttcaagatttcagatgatgat
gatgactctccaggaccaaagtctccaactacttcagagcagcaggagatgccggatgcc
gagggccctgtggtggagaagatcatggggatgcgcatgggaaagaaagagcttgattct
ggtgaagagttggaagttgaacagttttttgtcaaatttaaaggcttctcatacctgcac
tgtcgctgggcagacatcgaggagctggagaaggacaagcgaattcaacagaagatcaag
aggtttaaagccaaacaagtcttcaataactttctgaccgagatggatgatgagcccttc
aatccagattatgtggaggtggacagggttctggatgtgtctgaaagcacagatgaaaat
ggagagcttgtaactttgtacctggtgaagtggtgttccttggcctacgaggacagcaca
tgggagctaaaagctgacattgaccaagggaagattgaagagtttgagagggtgatggcg
cgtgagccagagctaaagcgtgtggagcgacctcccgctagcgactggcagaaatccgag
aattccagagaatataaaaacagcaatgcactcagggaataccagctggagggagtcaac
tggctgctcttcaactggtacaacacacgaaactgtattttagctgatgaaatgggtctt
ggcaaaacaatccagtccatcacattcctatatgagatatacctgaagggaatttgcagt
ccttacctcgtgatcgctcctctttccaccattcccaactgggagagagagttcaggaca
tggaccgagctcaacgtagtggtctatcatggtagccaggctagcagaaagaccattcag
gcttatgagatgttctacagggactcacagggccgtgtgataaagggagcttacaaattt
catgcagtcatcaccacttttgagatgatcttaacggattgccctgagttacgaagcgtg
ccgtggcgctgtgtgatcattgacgaggctcatagactcaagaacaggaactgcaagctg
cttgagggccttaagatgatggacatggaacacaaagtactgctgactgggaccccactg
caaaatacagtggaggagctcttcagtctccttcatttcctggagccagacaggtttccc
tcagagatcaccttcatgcaggagtttggagatctcaaaacagaagaacaggtgcaaaag
ctacagggcattctgaaacccatgatgctgcgccgactgaaggaggatgtcgagaaaaat
cttgcaccaaaacaggaaaccatcattgaggtggaactgaccaatgtgcagaagaaatac
taccgtgcaatcttggagaagaacttcgctttcctatccaagagtggaggaggaggaggt
ggtggtggcggcggaggaggaggaggaggatcatctaatgttcccaacctgctgaacaca
atgatggagctgagaaagtgctgtaatcacccctacctcatcaacggtgctgaggagaag
ataatggaggagtttagagacagtcatcccaccgaccacccagacttccacctccaggcc
atggtccaggctgcaggaaaactggtgctgatcgacaagctgctccccaaactgaaggct
gggggtcaccgtgtgctcatcttttcccagatggtgcgctgtctggacatcctggaggac
tacctcatccagagacggtatccatatgagcgtatagatggcagagttagaggaaatctc
cgacaggcagctattgaccgcttctcacggccagactcggaccgttttgtcttcctgctg
tgcaccagggccggaggcctcggtattaacttaactgcagctgatacttgcatcatattt
gactctgactggaaccctcagaatgacttgcaggcacaagctcgatgccacaggatcgga
cagagcaaggctgtgaagatttaccgcctcatcaccagaaactcttacgaaagggagatg
tttgacaaggccagtctgaagctgggactggacaaggctgtacttcagtccatgagtggg
agggagaacgccgccaacggggttcagcagctctctaaaaaggaaattgaggacctcctg
cggaaaggagcgtatggagctttaatggatgaggaggatgagggatccaaattctgtgaa
gaagacattgaccagattttgcagagacgtacacagactattaccattgaatcagagggc
aaaggctcaacatttgcaaaggcaagttttgtgtcctctgggaacagaacagacatttct
ctggaggacccagatttctggcagaaatgggcaaagaaggcagagctggacttagatgtg
ctccatggcaggaataatctggtgattgacactccacgggtgaggaagcagacacgtcac
tacagttctatgaaggaggatgaattggtggagtactctgatcttgagagtgactctgag
gacaagcccattcagaaaccacggaggcctcaggaccgaactcaggggtatccccgcagt
gagtgcttcagagtggagaagaacctgctggtgtatggctggggccgctggggtgacatc
ctgtcccacggacgcttcaagcgcccgctgagggagcgagacgtagagaccatctgccgc
gcactcctggcctactgcctgctccactaccgcggagatgagaacatcaagagcttcatc
tgggacctcatcacccctactgaggacgggcagagccgcacactgaccaaccactctgga
ctatctgctccagtgccccggggccgtaaagggaagaagggaaagatgcaggcttctcag
cctcacatgccacaggctgactggctggttgactgtaatcctgacatcctccttcaagag
gacagttacaagagacacctaaaacaccactgcaacaaggtgctgctgcgggtccgcatg
ctgtactatctgcggcaggaagtcatcggagaccaggcagacagaatcctggagggaaca
gattcaagtgagctggatatctggatcccacaacccttccatgccgaggtccccaccgat
tggtgggatgtcgaagcggataagtccctccttgtcggtgtctttaagcatggctatgag
aagtacaactctatgcgtgctgaccccaccctgtgtttcctggagagggtgggcatgcct
gatgccaaggccatcgctgccgagcagaggggagcggacatgatggcagatggtatcgag
ggagaggatgaagacccagaatacaagccactccgcatgactttcaaagacgatctggat
gattttacgaactctcctctggatgatggaattgatggcgagggtggagaagctcctaga
cctggggagaacgggaagacaggcaatctgtactggccaccagcctctgctctgaccgcc
agattacgccgcctcatcacggcctatcagcgcactcataaacgtgagcagctgagacag
gaagccatgaccaaacctgatcgccgtcgtcgccgcccacgcgatgacatcctctccatg
gtaacggagggaggagcttatgtttctgagggggctgtggcttacctggcagaaggatcg
cccttcatggctaagggatcaccttttatcccagatagcgccgccctgctggctgatgga
gcagcctactttaaagaaagacgacagagatggacaaggcgtgaagaagctgatttctac
cgtgtggtgtccacatttggtgtggtttatgacatccacaaacagtgctttgactggtcc
cagttccgtgcttttgctcgtctagacaagaagactgacgagagcctggaaaaatattac
tactcctttgtggccatgtgcaagcgagtgtgcaggatgcaggttaaagcagagacggag
ctgccagaccccaccctgatcattgaccccattacagaggagcgggcctcacggacgcta
tatcgcattgaacttctccggcgaatcagggagcaggtgttgctgcaccctctgctggag
gagaggttaagtctctgccaacccagccccgacctcccagcctggtgggagcctggacgc
cacgaccgagacctactaaggggtgcggcaaagaacggcgtgagccgaacagactaccac
atcctaaatgaccccgaactgagcttcctggaagcccatcggaagttcacccagggcaag
ggtgcggaactgcccatcatccctgatcctcttacccctctggctctggtcaaagaagaa
gaggtgaaggaagacccaggagatgtggtgatggccaaagtgcagaacggtgacactgta
gatgaggtcaaagagaagacaaccgaagctctgtctcctaagaaggaagtgaagatagag
acagcaaatgatttgagtcttaagcaggaacccaaagaggagaagatagaagtggaggag
aaagaagaaatgaccaccaaggcggagcaggtcagttttgaagatggcatggctgaggaa
aagccaatggatcagcagctcactcttcctacatgtcaggataaaaacactcagggggag
gagaagcctctctcgactactgagagtaaactgtctactgacaaaacatctgaagacgac
gacgacgaggaggagaagatggatgaggacgacaaatcggaaaaatcttcacaagctgaa
gctggtgccgcttctgagaggaagaattttgatgaggagagtaacgcctccttgagcact
gcccgcgatgagacacgagactgcttcagtgtcgatgacgtggagccgtcagcctctcag
atgttcagtgaacattctctcttctctttctggcccaaggacagggtaatgatcaatcgt
atggacaacatctgtgaagcggtcttgaagggcaagtggccttccaacagaaggcagttc
tttgactttcccggcctgttgcctggctacagctccatggcaacggacagccccctgcag
aggcggagtctcggtgatctctccatggtgggtcaggccagccttagtggcagtgaggac
ctcaccatgtcaccacaggtcaacaaggatgaggcattgagcctgtcggtgcctcgccaa
cgccgacgtaggaggagaaaagtggagatagaggctgagcgcgctgccaagcgcagaaac
ttaatggagatggtagctcagttacgagagtcccattctgcagaaggccaagctcaggcc
atggatctgaccaaagccctgcacggcatgtctgccacttcttccaccaccttccccaga
gccatggcctcttccgcagccttgaaggcccagatggagctgctacaagcaggtgcttcc
tccagaccaagagccaacggctctctattggattctgaactgcccaatcggagaaaaaga
ggccgtaggaaaaatgtggaggggctggagctgctttttatgggaaacaagagggcacca
ctcaatgctgacaattcagatgcgaccaaagcttttcttgatggggcacatatgccaaga
caggcacacagacacctttcatctcctgcgcagaaggctcctggtgatggcctagaagaa
gggagccatcttaaaggagaagatggacccagcactaaagaccttcgggaatggctgaaa
cggcatcccacatacactatggatatgtctggatttctaccaaagaatgaggatcacctc
ctctcccaattcaccaagcccaaacagaaaagacaccgttgtcgcaatcctaacaagatt
gacattaacacactgactggggaggagagggtgccagtggttaatataaggaacggcaga
aagatgggaggagccatggcccctccaatgaaggatttaccccgctggctagttgaaaat
ccagagtttgccatctccccagattggacggatattgtaaaacaatcgggctttctccca
gagtccatgtttgaccgtctcctgactgggccagtggtaagagaggagggcgtgcgccgc
agaggcagacggcccaaatctgagatcgcaaaggcagcggcacaggcagctgccgcagca
gcggcctccacctctggagttaatcctttattaatgaacggactgtttggaggtatggac
ctgacaagtctgcagggcctgcagaacctgcagggcctgcagaacctccagagcctccag
ctggcggccggcctcatgggctttcctcccgctctaggaggaggggcagatgccaagcac
gctgctgccatgttgcctctgatgcttccaggcatgggtggcctacccaacatgttcaac
ctggggggactgtttggaggaaatctggtcgctgctgcctcagccaccaacggcgcctcg
ggcacagaacaggccgaatctgaggagaaaccgaagcccaagaaggatgaggaaagtaaa
gaggagaaagagaatgacaaagaagcggagaaagcgatgtgtgaaacggaatctgatgag
gctacaggagatgctgctgcactgaatgcggctgctgccgcctctgctggcatgtcgact
actcccttggcctttaaccctttcctgctttccaccatggccccaggcctcttctaccca
tccatgttcttaccccccagtcttggtggcttgggcctcccaggctatccccaagcttcc
ctagctgaccttcagagtgctgtgtcaggggccttgggggctactggcgacgacaaggag
tccggtaaagaagcccgcgctgatcaggaccagaatgcctccacagctgatgttgaaact
gctgacaacacacttgaagacagtgactcggaggagagccagaacaagactgctgattca
tcagtactggatgacgacctggcaggaccagctgaggactcaatggagggtggaatggat
gacgatgatgatgacgatgatgacgacgatgatgacgacgatgatgaccctgctgatgag
gatgacaaaagtgactaa
DBGET
integrated database retrieval system
