Triplophysa rosa: 130554000
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Entry
130554000 CDS
T09216
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130554000 (fubp1)
03041 Spliceosome [BR:
tros03041
]
130554000 (fubp1)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130554000 (fubp1)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130554000 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
130554000
NCBI-ProteinID:
XP_057189348
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Position
LG5:complement(15316210..15328324)
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AA seq
650 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGETTPTATNEFGYGGQKRPLEDA
SEYHDQPETKKVPPSDPFYAVMGGMGGPSRTLSEDYKVPDGMVGFIIGRGGEQISRIQQD
SGCKIQIAPDSGGMPERSVMLTGSPDAIQAAKSLLSEIVDKGRPSPAFHHNDGAGMSVQE
IMIPSTKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKE
MVMDLIRDQGFRDQRGEYGSRAGGGDSLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQ
FKPDDGTTPERIAQIMGPQDRAQHAADIISDLLRSVQTGGPPGHGGGGRGRGRGQGNWNM
GPPGGLQEFNFTVPTVKTGLIIGKGGETIKSISQQSGARIELQRNSPPNADPNIKMFTVR
GSPQQIDYARQLVEEKIGGPVSPMGGPHGPHGGPSHGPPGPPGPPAPMGPYNPGPYGQGP
PGPHGPPAQYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYSQYQQQPQGPMTPTT
GAPGTTQTNGQGDPQAPGQSGQADYTKAWEEYYKKMGQGQPQQDYTKAWEEYYKKQGQAA
PQAAATAAATQPGGQPDYSAAWAEYYRQQAAYYGQGAPGAAPQAQQVHGH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctgactactccagcgtggcaccaccgtcatctaacgccggtggagggatgaacgat
gcttttaaagacgcccttcagagggccagacaaatagcggcaaaaataggaggtgaaact
acccctacagctacaaatgagtttggatatgggggacagaagagaccccttgaagacgct
agtgagtaccatgatcaaccagaaacaaaaaaagttccaccaagtgaccctttttatgca
gtgatgggaggaatgggtggtccatcaaggactttatcagaagactataaggttcctgat
ggcatggttggcttcatcattggaagaggaggagaacagatatcaagaattcagcaggac
tctggatgtaaaatacagattgctccagacagtggtggcatgccggagaggtcagtgatg
ttaacaggctcacctgatgccatccaagctgcaaagagtttactgtcagagattgtagac
aaaggcagaccatccccggcattccaccacaatgatggagcagggatgtccgttcaggag
atcatgatcccctctaccaaagcaggcctggtcatcggaaagggaggagaaacaatcaaa
cagttgcaggaacgtgctggagtcaaaatggtcatgattcaagatgggcctcaaaacaca
ggtgctgataaaccactccggatctccggagatccttttaaagttcagcaagctaaagag
atggtgatggacctgatcagagatcaaggtttccgggatcagaggggagagtatggttct
agagctggtggaggagacagtctggatgttcctgtaccaaggtttgcagtaggaattgtg
attggcaggagtggtgaaatgatcaagaagattcaaaacgacaccggtgtaaggattcag
ttcaaaccagatgatggcaccacgccagagagaatcgctcagatcatggggcctcaagac
agggcacagcatgcagcagacatcatatctgatctgctgaggagtgtgcagactggaggg
cctccaggacatggaggcggaggcagaggaagaggccgcggacagggaaactggaacatg
ggtccccctggaggcctgcaggaattcaacttcactgtccctactgtgaagacgggtctc
attatcggcaaagggggtgaaaccattaaaagcattagtcagcagtcaggagccagaata
gagctccaaagaaactctccacctaatgcagacccaaacataaagatgttcacagttcgt
ggctcacctcaacagatcgactacgccaggcagctggttgaggagaaaattgggggaccc
gttagccctatgggaggccctcatgggccacatggaggtccttctcatggcccacctggt
ccacccggacctcctgcacccatgggcccctacaaccctggaccttatggccagggccct
cctggaccacatggtcctccggcacaataccagcctcaaggctggggcaatggatacccc
cactggcaacaaggacagccagatcccaataaagcagcggctgacgctaatgccgctgca
tgggcagcctattattctcagtaccagcagcaacctcagggccccatgacacccaccaca
ggtgccccaggcacaacccaaaccaacggacaaggtgacccgcaagctccaggtcaaagt
ggacaggcagattacaccaaggcctgggaggaatattacaaaaaaatgggtcaaggacag
cctcagcaggactacaccaaggcatgggaagagtactataagaaacaaggtcaagcggct
cctcaggcggctgcgactgcagcggcgacccagccgggaggtcagccggattacagtgca
gcgtgggcagaatactaccggcagcaggcagcgtactatggccagggagcccctggagct
gcaccccaggctcagcaggtacacggccattaa
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