Triplophysa rosa: 130554006
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Entry
130554006 CDS
T09216
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130554006 (cdh12a)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Major cadherins
130554006 (cdh12a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
130554006
NCBI-ProteinID:
XP_057189361
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All DBs
Position
LG5:complement(7444856..7526391)
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AA seq
799 aa
AA seq
DB search
MLMGNCLLLFLWCLLDKSFVSPLHSSIQSRMAKEHHRNLMAHRKHGMMGAHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDLDKGDNMVKYTLSGEGVGSIFAVEPSTGDIHALRSLDR
EEKPYYTLRAQAVDVLTGRPLEPQSEFIIKVQDINDNEPRFLEGPYTASVAEMSPVGTYV
TQITASDADDPTYGNSARIVYSILHGQPYFSVDAKTGVIRVALPNMDREVKEMYQVVMQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVPESSLVGSSVGRIRAHDLDSG
KNADVEYSIFPADGGSLFDIYSNKHTQEGTVILKKRLDYETRKAYTFKVEASNIVLDHRF
LHLGPFKDTATVKVNVLDVEEPPVFSRPSYSMEMFEDTPVGIIVGAVTAEDLDVGNSPIR
YSIEWRTHSINHFDIDPNEGTLSVNEALDRERNDEHNVTVVATKVNNPLLSSKVTVTIKV
LDVNEFPPELALEYETFVCENAKVGQVIQIISATDRDVPAVKHRFYFKSPSHIRTRNFTI
RDYGNNTAGVVTRRGGFRRMQQNAYLVPVVVEDGGYPIRSSTGTVLVRVCTCDTDGSMLS
CSAEAVFFPMGLSTGAVMAILLCIVILLVMVMLYIGVRRHKKKDTLMSSKEDVRDNVIHY
DDEGGGEEDTQAFDIGTLRNPKGIDEAAQSRKIRSDDQCGVPVSTEEDEDIRAYIHHCLH
EDHISNSEPPYDSLVTYAYEGEGSVAESLSSIESWVLDSKEDYRSWGPRFKTLAGIFKEH
ESKATENSETRPHTEERLD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaactgcctgctgctctttctctggtgtctcttagacaaaagctttgtg
tctcccctgcactcttcaatccagagcaggatggcgaaggagcaccacaggaatctcatg
gcacataggaaacatggaatgatgggagctcacagagtcaagagaggatgggtgtggaat
cagttcttcgtcctggaggaatacatgggatctgacccacagtatgttgggaagcttcac
tcagacttggataagggagataatatggtcaaatacacgctctcaggtgaaggagttggc
tctatttttgctgttgagccaagcacaggagacattcatgccttaaggagcctggacaga
gaagagaaaccttattacacgctgagagcgcaggctgttgacgttctcactggcagaccc
ttagaaccccagtctgagtttattatcaaagttcaggacatcaacgacaatgagccaaga
ttcctggagggcccgtacacagccagtgttgcagagatgtcacctgtcggcacatatgtg
acgcagataaccgcctctgatgctgatgatcccacatatggaaacagtgcaaggattgtg
tacagtattctgcatggacagccctacttctcagttgatgccaaaacaggggtcataaga
gttgccttacccaacatggatagggaggttaaggaaatgtaccaggtggtcatgcaggct
aaagacatgggaggtcagcttggaggcttagctgggaccaccaccatcaacatcactctc
cgggatgtcaacgacaacccacctcgattttctaaaagtatctttcacctgcgggtccct
gaatcttcactagtgggctcatctgtggggaggatcagagctcatgatctggactccggg
aagaatgctgatgtggagtacagcatttttcctgctgatggaggatcactgttcgatatt
tacagcaataaacacactcaggagggaacagtgatactgaaaaagcgtctcgattacgag
accaggaaggcatacacctttaaagtcgaggcttcaaacattgttcttgatcatcgcttc
ctacatctgggaccttttaaagacacggccacggtgaaagtgaacgttctggatgtggag
gagcctcctgtcttcagccggccgtcctatagcatggagatgtttgaggacacacctgta
ggcattatcgtaggagctgttacagctgaggacctggatgttggcaacagtcctataagg
tattctattgagtggagaacgcactctataaaccactttgacattgatccaaatgaaggt
actctatccgtcaatgaagctctggacagagaaagaaacgatgaacacaacgtcactgtt
gtagcaacaaaagttaacaaccctctgctgtccagcaaagttactgtcacaatcaaggtg
ttggatgtcaatgagtttcctccagaacttgctttggaatacgagacatttgtctgtgaa
aatgcaaaagtaggccaggtgattcagatcatcagcgccacagacagagatgtgcccgcc
gtaaaacacaggttctactttaaatccccttcgcacatcagaaccagaaacttcaccatc
agggactatggaaataacacagctggagtggtgacaagacgaggggggtttcggagaatg
caacaaaacgcgtacctggtgccggtagtggtggaggacggcggctacccgatccgaagc
agcacgggcacggtgctggtgcgggtgtgtacctgcgacacagacggctcgatgctttcc
tgcagtgcggaagcggtcttctttcccatgggactcagtactggagcggtgatggccata
ctgctgtgcattgtcattctgctggtcatggtgatgctctatataggtgtaagaagacac
aaaaagaaggacaccctgatgtcgtccaaagaggacgtacgggacaatgtgatccactat
gatgacgagggcggtggtgaagaagatactcaagcctttgacatcgggacgctgcgcaat
cccaaaggcattgacgaggctgcgcagtcgcgaaaaataagatcggatgatcagtgtggc
gtgcccgtgtcgacagaagaggacgaggacatcagagcctacatccatcattgtctccat
gaggaccacatcagtaactcagaacctccttatgactctcttgttacatatgcctatgag
ggagagggctcggtggccgaatccctcagttccatcgagtcctgggtgcttgattccaaa
gaggattacagaagctggggtcctcgtttcaaaacactggccgggatattcaaagagcat
gagtctaaagccacagagaactcagaaactagaccacacactgaggagagactcgactga
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