Triplophysa rosa: 130554029
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Entry
130554029 CDS
T09216
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
tros
Triplophysa rosa
Pathway
tros04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130554029 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130554029 (stag1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130554029 (stag1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Cnd1
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
130554029
NCBI-ProteinID:
XP_057189400
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Position
LG5:complement(9327513..9379071)
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AA seq
1259 aa
AA seq
DB search
MITSELPVLQDSGETGQDTVSLSMSMSELDDSGDGKAKKKRGRPGRPPAPNKKPRKSPSE
KGLVGAPRGRKANGMAQHNGEGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRDLALLDL
INFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTISGPLWKKFRYNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTN
RELYPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVYHLV
YSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQENALIELTVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQTDAEKVANLLQIPQFFD
LDVYSAGRMEKHLDGLLKQIKIVVEKHIDTEVLEACSKTYSILCSEEYTIMNRVDIARSQ
LIDELADRFNHSVEELLQAGEEADDDDIYNVLSTVKRLTAFHNAHDLTRWDLFGNCYRLL
RTGIEQGSMPEQIAVQALQCSHYSVLWQLVKITEGSPSKDDLLAQRRVVKSFLAVCQQCL
SNVNTPVKEQAFMLLCDLLMIFSHQLTTGSREGLQPLVFNPDSTLQNELLNFVLDHVFID
QDEENQSIEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYNDY
GDIIKETLSKTRQTDKILCAKTLILSLQQLFNELIQDQGPNLDRTSSHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGPEYPPPNLAFLEVLCEFSSKLLRQDKK
TVHSYLEKFMTEHMMERREDIWLPLISYRNSLLTGGDEDRMSITSGSSSSKAGSIRSKKG
RPALHKKRIEEESLEGSWMMRNDTLRTPGALQTPQLTSTVLRENPRQAAEHIPDQDSEPG
SESDYVHNPQMQMSWLGQQKMEEVNRKERTAMNYMKARSGGGVRHTVRGLMEDDGEPIFE
DVMMSSRGHLEDMSEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMPMF
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcagagctgccagtcctacaggactccggtgagacgggtcaggatacggtg
agtctcagcatgagtatgagcgagctggatgactctggtgatggaaaggccaagaagaag
agaggaaggcctggcagacctcctgcacccaacaaaaagccccggaagtcaccatcggaa
aaagggctggtgggggccccgcgtggacggaaggccaatgggatggcacagcacaatggc
gagggagatcctgtcactctttttgaagtggtcaaacagggcaagagtgcaatgcagtca
gtggttgatgactggattgaatcgtataagcaggacagagatttagcacttttggacctc
atcaacttcttcatccagtgctctggctgtaaaggcactgttagaatcgaaatgtttcgc
aacatgcagaacgctgagatcatccgcaaaatgacagaagagttcgatgaggacagtggc
gattaccccttgaccatatccggtccattgtggaagaagtttcgctacaacttctgtgag
ttcattggcgttctgatccgacagtgtcagtacagcatcatctacgacgagtacatgatg
gacacggtcatctctctgctcacgggtctgtctgactcacaggtccgggccttcagacac
accagcactctggcagccatgaagctcatgacagctctggtgaacgtggctctgaacctg
agcattcaccaggacaacacacagagacagtatgaagcagaacgcaacaaaatggcggga
aagagggcaaatgagaagcttgaacttcttctccagaagaggaaagagcttcaagaaaac
caagacgaaatcgaaaacatgatgaattcaatcttcaagggaatctttgttcatcgctat
agggacgcaatagctgagatcagagctatttgtatagaggaaattggtgtgtggatgaaa
atgtatagcgacgcctttctgaatgacagctacttgaaatacgtgggatggaccttacat
gaccggcaaggcgaggtgcggttgaagtgtttgaaagccttacaaaacctctacaccaac
cgggaactttatcctaaacttgagctcttcacaaaccgcttcaaggatcggatcgtgtcc
atgaccctggataaagagtatgatgttgcagtagaggccatcagactggtgacgttgatc
ctacagggtagtgaggacgctctgtctaatgaagactgtgagaatgtctatcatctggtg
tattctgctcacaggcctgtggctgtggctgctggggagtttctacatcgaaagttgttc
agcagacatgaccctcaagcggaggaggctctggccaaacgcaggggcaggagcagcccc
aacggaaacctcatccgcatgctggtcctcttctttctggagagtgagctgcacgagcat
gctgcttatctggtggacagtttgtgggagagctcacaggagctgctgaaagactgggag
tgtatgacagagctgctgctggaggaaccagtgcagggagaagaggtgttgtcggacaga
caggagaacgctctgatcgagctcactgtgtgtactatccgtcaggccgcggaagcacac
ccacctgtggggagagggactggaaaaagggtcttgactgcaaaggaaagaaaaacccag
attgatgacaaaaacaaactaaccgagcacttcatcatggcacttcccatgttactctca
aaataccagacagacgcagaaaaagttgcaaacctactgcagatacctcagttctttgac
cttgatgtgtacagtgctgggagaatggagaagcacttggatgggttgctcaagcagatc
aagattgtagtggagaagcatatagacacagaggttctggaggcctgcagcaagacctac
agcatcctgtgcagtgaggagtacaccatcatgaaccgcgtggacatcgcccggagtcag
ctcattgatgaactggccgaccgattcaaccactctgtggaagagctgctgcaggcgggc
gaagaagcagatgacgatgacatctacaatgttctctcaactgtgaagagactcactgcc
tttcacaatgctcatgacttgaccagatgggatttgtttgggaactgctacaggttgcta
aggactggaatagagcagggatctatgccagagcagatagcagtgcaagctcttcagtgt
tctcattactcagtactgtggcagctggtgaagatcactgagggctccccatccaaggat
gatcttctagcacaaagaagggttgtcaagtcttttctagctgtatgccaacagtgttta
tcaaacgtcaacacgccggtcaaagagcaggcgttcatgctgttgtgtgacctgctgatg
atcttcagtcaccagctcaccacagggtccagagaaggtctacaaccgctggtgtttaac
ccagacagcaccttacagaacgaactgctcaactttgtcctggatcatgtgttcattgac
caggatgaagagaatcagagcatagaaggtgatgaggaagatgaagctaacaagatcgag
gccttacacaagaggaggaaccttctagctgctttcagcaagctcatcatatatgatata
gtagacatgcctgctgctgctgatatcttcaaacactacatgaagtactacaatgattat
ggagacatcatcaaagaaacactaagcaaaaccaggcagacggacaagatactgtgtgcc
aaaacactcattctgagcttacagcagctctttaatgagctgatccaagatcagggtcct
aacttagacagaacctcatctcatgtcagcggcattaaggaattagcccgccgtttcgcc
ctgacctttggattggaccagatcaagaccagagaggctgtggccacactgcacaaagat
ggaatcgagtttgcctttaaatatcagaatccaaaaggacccgagtatccgcctccaaac
ctggctttcctagaggttctctgcgagttctcctcgaagctgcttcgccaagacaagaaa
acagttcactcgtatctggagaagttcatgaccgagcacatgatggagaggcgtgaggac
atctggctgccgctcatctcctacaggaactctctattgacgggtggagatgaggaccgc
atgtccatcaccagcggcagtagcagcagtaaagctggatctatacgaagcaagaagggc
cgcccagccctgcacaagaaacgcatcgaggaggagagtttagagggctcttggatgatg
aggaatgacactttgcggaccccaggagccctgcagaccccccagctcacttccaccgta
ctccgagaaaaccctcgccaggctgccgagcacatcccagaccaggactccgaacccgga
tctgaatcagactacgtacataatcctcagatgcagatgtcctggcttggacagcagaag
atggaagaggtgaacaggaaagaacgcacagccatgaactacatgaaggccaggagtgga
ggaggagtacgacacactgtacgtggtctcatggaggatgacggcgaacccatttttgag
gatgtcatgatgtcatctcgtggacatctagaagacatgagtgaggaattcgaggacact
atggtgattgacctgcctccatccagaaacaggcgagagagggcggagctgagaccggac
ttctttgactcggcagccatgattgaggacgagtcgggtttcacaatgcccatgttctga
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