Triplophysa rosa: 130554046
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Entry
130554046 CDS
T09216
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130554046 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130554046 (vcpip1)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130554046 (vcpip1)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C64
130554046 (vcpip1)
Ubiquitin system [BR:
tros04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
130554046 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
130554046
NCBI-ProteinID:
XP_057189426
LinkDB
All DBs
Position
LG5:20214758..20221821
Genome browser
AA seq
1102 aa
AA seq
DB search
MSLIPGAKQKDRRILCGMCPDPQCQAKLFFPAHTSISIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVPGPPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQSGTAKLLK
DMNQGDIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANSNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGTPLPRLPSALLPKAWGIPQELIRRYVS
LDSSGSCVIGGDRSLQDKYLLRLVGAMEDVFMDKHGIHPSLVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHMPAEWLIPGGKLYNLAKSTHGTLRGDKNYSF
PLNSLVCSYNPEKDVLVPDYKLSSLTACTWCHGTSVRRVHGDGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGKEYENLPEAFPITLEWGGRVVRETVYWFQYETDPSLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQDEYNPVNIEGAHVQNRADGAEPVTHPPTKI
ILTGQKGKTLHKEELVMSRTERVLQHSISEQAALSQRRSTDRVRQQNPRPSSPSSAASSA
PPTPTKVPPSSGEKKIRVTTSDGRQAMLTLQPHTTYSDLQNSIIQVFNLPPGQLCIRHGF
PPRELPPPLPEDQNQQVGLQHGDRISVEVLKESSPDAHLSQTQSHAPETHDPRASSRELQ
DNIDLEMSSLCLLAALLGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHCTLPHLS
GKTFVFNAAEDRLELCVDSAGHFPVGPDVEDLVQEALSQLRTDAASHSHEGSPAHSLRLG
SGGAVRRKEQSVTAFQGKGHSLGSAPPEHPPIRRQHSSGVDLSGSVRGESLPLSGEELVR
VAPGMLTLREGHGVGLEPAVIEAQRQRLQEMVSSIQASMDKHLRQHSAARHDGKEEETTD
KQEEMESHGPEPPSTFEPMDQS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgatcccgggcgcgaagcaaaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttctttcccgcacacacctccatcagcatcgagtgc
accgagtgcggccagagacacgagcagaaaaacctcgcgaatgtggaagaggtgactgac
ccagatgtggtgcttcataacctgctgagaaatgctttgcttggtgtgccgggccctccc
aaaaagggcacggagctggtgaaagtgatgggactgtcaaactatcactgcaagctgctc
tcccccatcctcacccgctacggaatggacaaacagtcgggcactgctaaacttttaaag
gacatgaaccagggagacatctttgactgttcacttctaggtgacagggcatttctcatt
gaacaagagcacgtgtccactgttggctatggtagagaccgttcagggagtttgatctac
ctgcatgacaccttggaggagatcaagaaagcaaactcgaatagagagtgtctcatcccc
gtgcacgtggacggagacggacactgcctggtccacgccgtgtcccgggctctagttgga
cgtgagctcttctggcatgccctcagagaaaaccttaaactcaacttcaagcagaacctg
gaccgctacaaagctttattccaggactttattgacgcagccgaatgggaagatataata
aatgaatgtgacccgttgttcatccctccagagggcgtaccgttgggcttgaggaacatc
cacatattcggactggccaatgtgcttcacagacccataatccttttggactccctgagc
ggcatgcgcagctcgggcgattactccgccacctttctcccaggcctggttccagaggag
caatgccgaggaaaagatggcacactgaacaagcccatctgcattgcgtggagcagctcc
ggcaggaatcactatcttcccctagtgggcataaagggcacgccgttaccccgtttacct
tctgcgttgttgccgaaagcgtggggcatcccacaagagctgatccggagatatgtgagt
ctggactccagcggcagctgtgtgatcgggggcgatcggagtctgcaggataaatatttg
ctacgtctcgtgggtgcaatggaggatgtcttcatggacaagcatgggatccacccctca
ctagttgcagacgttcaccagtacatatacaggcgcactggagtgatcggcgtgcaacct
gaggaggtcacggaggcagcgaagaaatcagttcaggagggccgtctccatcgttgtttg
gtctgcaacgcactttctgagctccacatgccagccgagtggctcatacccgggggtaag
ctctacaacctggccaaatccactcacggcacgcttcgaggtgataaaaactacagcttc
cctctaaatagtttggtttgttcctacaaccctgaaaaagacgttctggtgcccgattat
aaactaagctccctcacggcctgcacctggtgccatgggacctccgtaagacgcgtacat
ggcgacggctctgttgtttatttggatggagatcgtaccaacacgaggtcgcagggtggg
aaatgtggatgcggcttcaagcacttttgggaggggaaagagtatgaaaatcttcctgaa
gcgttccccatcactctggagtggggcggccgtgtggtgcgcgagactgtttactggttc
cagtacgaaacggacccgtcgcttaacagtaacgtttacgacgtgaccatgcggctcgtc
accaaacacttcccgggtgagttcggcagcgagatcctggtgcagaaagtggtaaacacc
attttgcatcacacagccaagagaagccaagatgaatataatccggtcaacatagagggc
gctcacgtgcagaacagagccgatggggctgagccggtcacccaccctcctaccaaaatc
atcttgacgggtcagaaaggtaaaacattgcataaagaggagcttgtgatgagcaggacc
gaaagagtcttgcagcacagcattagcgagcaggcagctctctcccagcgccgaagcaca
gaccgtgtgcgccagcagaaccctcgcccttcgtccccttcctctgctgcctcctcagct
cctcccactcccactaaagtgccaccctccagtggagagaaaaagatccgtgttacgacc
agtgacgggcggcaggccatgctcacgttgcaaccgcacaccacctatagtgacctgcag
aactccatcatccaggtcttcaacttgccacccggccagctgtgcatccgccatggtttc
ccgcccagagagctgcccccgccactcccagaggaccagaaccagcaggttgggttgcaa
catggcgatcgcatttctgtagaagtgctgaaagagagctcgcccgacgctcacctgagt
caaacacagtctcatgcacctgaaactcatgacccacgtgcaagcagcagggaactccag
gacaacattgaccttgagatgtcttcactttgtctcctagcagcactcttgggtgaagat
gtctggtcatatgccaagaaactgcctcacctcttccagcaaggaggagtcttctacaat
attgtcaagaaagacatgggtctgttggacgggaagcactgcacactgccccacttgtct
ggcaagacgtttgtgtttaatgcagcagaggatcgattggagctatgtgtggactcagct
ggtcattttccagtaggccctgatgtagaggacctcgttcaggaagccctctcccagctc
cgcactgatgcagcctcccatagccatgaaggaagccccgcccacagcctacgattgggc
tccggtggggcagtgcgcaggaaagaacagagcgtcaccgccttccagggaaaaggtcac
tctctaggctccgcccctcctgagcatcctccaatacgacgacagcacagcagcggcgtg
gatctcagcggcagcgtcaggggagagagtttacctctgtcgggtgaagagctggtgcgt
gtggccccaggcatgcttactctacgtgagggccacggcgtggggctggagcccgctgtg
atcgaggcccaacggcaacgcttgcaggagatggtttcgagcatacaagcgtccatggac
aaacacctgcgccagcactctgcagcaaggcatgatgggaaggaagaagagactactgac
aagcaagaagagatggagagtcatgggccagagcctcctagcacttttgagcccatggac
caatcctga
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