Triplophysa rosa: 130554055
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Entry
130554055 CDS
T09216
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
tros
Triplophysa rosa
Pathway
tros04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130554055
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
SWIRM
Motif
Other DBs
NCBI-GeneID:
130554055
NCBI-ProteinID:
XP_057189448
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Position
LG5:complement(20150814..20157634)
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AA seq
626 aa
AA seq
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MASGGHMPAPVCLIENGHDGKLCVTKDAIDILNGINEPVVVVSIVGLYRTGKSYLMNRLA
GQQSGFALGNTVESKTKGVWMWCVPHPSVKGQTLMLLDTEGLGDVQKGDSKNDGWIFCLA
VLLSSTLVYNSRGTIDNDAVQKLQYITELAEQIKIRSPSSPSEDEEEEENSQFVCFFPSF
VWAVRDFTLDLKINGRKATEDEYLQYALELKKGLSKKNTDYNLPRECIRRYFPSRKCFVF
LPPASPENMRRLESLRLEDLVADFREATHRFCEYIFLKSPVKTLKGGHRVTGKLLGQLAQ
IYVETISXGKVPCLDNAVVALANLENKAAVQEAFKVYQSGMEEVKNKFPVSMENITSVHQ
KSSSLATSEFMTRSFKDEKGEYVTNLKQDIDMYYVVLMEENEMASERKCKELLKDLFSDM
NERLQNGEYSQCGGYEIYCRDRDAIIAQYRREPNKGVKAEAVLNEFLNERAAEANSILHA
DKKLTESEREIKERKEMEDLLQQKCKEEEEKRIESERMMKVEQERQKDTVKQMEEKFNKE
MEQRREEMDRAMESKLKEQEELLSKGFKEKADELHEEIKSFKEKKEAISVGGIFKDYVMP
LLGTGADLLSNIFMHRSLLKGLKALK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggcggtcacatgccagctccggtgtgtctcattgaaaatggtcacgacggt
aaactgtgcgttacaaaagatgccatagacattctaaatgggatcaatgagccggtggtg
gtcgtgtccatagtgggtctctaccgtacggggaagtcttaccttatgaaccgcttagca
ggacaacagtcaggctttgctcttggtaacactgttgagtcaaagaccaaaggcgtctgg
atgtggtgtgtccctcatccatctgtaaaaggacagactctgatgctgctggacaccgaa
ggactgggtgacgtgcaaaaaggagactctaagaacgacggctggatcttctgtctggct
gttctgctcagcagcactctggtgtacaacagtagaggaaccatcgataatgatgcagta
caaaagctgcaatacattactgagctcgctgagcagatcaagatcagatcaccatcatct
ccatcggaagatgaggaggaggaagaaaattctcagtttgtgtgtttttttccatcattt
gtctgggctgtgagggatttcaccttggatctgaaaattaatgggagaaaagcaacagag
gatgaatatcttcaatatgctcttgagctgaagaaaggtttgagtaagaaaaacactgac
tacaacctgcctcgtgagtgtatccgaagatatttcccttcccggaagtgtttcgtgttt
ctacctccagcctcaccggaaaacatgagacgtctagagagcctacgtttagaggacctg
gtggcagattttcgagaagccacacatcgtttctgtgaatacatatttctcaagagtcct
gtgaaaacactgaaaggaggacacagagttactgggaaattgctgggtcagttggctcag
atttatgtagagaccatcagcnagggtaaagttccctgtctggacaatgctgtggtcgct
cttgcaaatctagagaacaaggcagctgttcaagaagctttcaaagtgtatcagagtgga
atggaggaagtaaagaataagtttccagttagcatggagaatattaccagtgtgcaccag
aagtccagcagtctggccacttcagaattcatgacacgctcctttaaagatgaaaaagga
gaatacgttacaaacctaaagcaagatatcgatatgtactatgtagtactgatggaagag
aatgagatggcatcagagaggaagtgtaaagagctgctgaaggatctgttctctgacatg
aatgaacgactgcagaatggagaatacagtcagtgtggaggatatgaaatctactgcaga
gacagagacgccatcattgcacagtaccgcagagaaccaaacaagggagtcaaggctgag
gccgtactgaatgagttcttgaatgagagagcagctgaggcaaacagcatccttcacgct
gataaaaaactcactgagagtgaaagggagatcaaagagcggaaagagatggaagatctt
ctgcagcagaagtgtaaagaggaagaagagaagcgtattgagagcgagcgaatgatgaag
gtggagcaagagcgccagaaggacacagtaaagcagatggaggagaaattcaacaaggag
atggagcaacggcgagaggagatggacagagctatggagagcaaactgaaggaacaggaa
gagctgctgagcaaaggctttaaggagaaagctgatgagctgcatgaagagatcaagagt
ttcaaagaaaaaaaagaggccataagtgttggtggcatttttaaagattatgtgatgcct
cttcttggaaccggcgcagacctgctttctaacatattcatgcacagatcattattgaaa
ggcctgaaagcattaaaataa
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