Triplophysa rosa: 130554056
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Entry
130554056 CDS
T09216
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
tros
Triplophysa rosa
Pathway
tros04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130554056
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF7607
DUF7605
Motif
Other DBs
NCBI-GeneID:
130554056
NCBI-ProteinID:
XP_057189449
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Position
LG5:20194289..20200620
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AA seq
625 aa
AA seq
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MARGGRMPAPVCLIENDDNGKLLVRKEGKDILDGITEPVVVVSVVGLYRTGKSYLMNRLA
GQQSGFALGSTIESKTKGIWIWCVPHPCKEGHTLVLLDTEGLGDVQKGDEKHDTWIFCLA
VLLSSSLVYNSLGVIDNTALEKLHYVTELTEHIRVKANPSKDEDESVEFMRVFPSFVWAV
RDFTLELKIADEPITSDEYLERSLTLKKGTSPQAVRFNLPRQCLRNFFAVRKCFVFPRPA
GAEDMRKMEKLTEEDLEPEFLQQANTFCQYIYNCAEPKTLSRGRAVTGTALGNLAEVYVE
AIRSGKVPCLENAVVSLAEIQNGRAVEQAMELYMKEMFERTQLPMDPEDLSDIHQMAEKA
AVELFITMSFNDNEQTHQQDLMGKVYNNYQEMCYQNQEEFIKQCEAVQRDVFETLENAIS
AGLYMRPGGYREYKDALKELTNEYRTKTRSKLMSEEVLSTYLKAKEAVGKMILQSDQSLS
AAEHAREVERLKNEVLEQRQRSLEEQNRLQAQVFHDMQRTHDEHVNQLMHQMEREQERLR
RDNERVLDAKLKEREALLTQDFQRDADRMQRDIDSLKADIIKEDASKPSTLSRVLDGIGT
AATFVLPGFIPKAIGAGLSFLSRLF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggtggacgcatgcctgctccggtgtgtctcattgaaaatgacgacaacggc
aagctgcttgtgaggaaagaaggcaaagacattctggacgggatcactgagccggtggtg
gtcgtgtctgtagtgggactctaccgtacagggaagtcttatctcatgaaccgcttagcg
ggacaacagtcaggctttgctctcggcagcacgatcgaatccaagaccaaaggcatctgg
atctggtgtgttcctcacccatgtaaagaaggccacactctggtgcttctagacacagag
ggacttggtgacgtacagaagggggatgagaagcatgacacatggatcttctgtctggct
gttctgctcagcagctctctggtgtacaacagcttaggcgtcattgacaacacggcgctg
gaaaaattgcattatgtgaccgaactgacggaacacattcgtgtgaaggcaaacccaagc
aaagacgaggacgagtcagtggaattcatgcgggttttcccgtcttttgtctgggctgtt
cgggacttcactctggagttgaaaatagccgatgagcccataacatcagacgagtatctg
gaaagatcactgacactcaagaaaggcacttctcctcaagcagtgaggtttaaccttcct
cgccagtgtctgcgcaatttctttgctgtgaggaagtgctttgtctttcctcgacctgct
ggtgcagaagacatgaggaaaatggagaagttaactgaggaggacctggagccagaattc
cttcaacaggcaaacactttctgccaatacatttacaactgcgcggagccgaaaactctc
agcagaggtcgtgcggttacaggaactgctctgggtaatctcgctgaagtgtacgtggag
gccatccgcagcgggaaggttccctgtctggagaacgcggtggtttctctggcagagatt
cagaacggtcgtgcggtggaacaggccatggagctttacatgaaagagatgttcgaacgc
actcagcttcctatggatcccgaagatctatctgacatccaccaaatggcagagaaggcg
gctgttgaactgtttatcaccatgtccttcaatgacaacgaacaaactcatcaacaagat
ctcatgggaaaggtctataataattatcaagagatgtgttaccagaatcaggaggagttt
ataaaacagtgtgaagcagttcagcgtgatgtgtttgaaactttggaaaatgccatttct
gctggattgtacatgaggcctggaggatacagagagtacaaagatgcacttaaagagctg
accaatgagtacagaacaaagacacggtcaaaactaatgagtgaggaagtgttaagcacg
tatttgaaagcaaaggaagctgttggaaagatgattttacagtctgaccagtctctcagt
gcagctgaacacgcaagagaagtggagaggttaaagaatgaggttctagagcagcgacaa
aggagtctagaggaacagaaccgcttacaagcgcaggtgtttcacgacatgcagagaacc
catgatgagcatgtgaatcagctcatgcatcagatggagagagagcaagagagattgaga
agagacaatgaacgagtcctcgatgcaaaactcaaagagagggaagctcttctaacccag
gacttccagagggatgctgatcgcatgcagagagatattgacagcctgaaagcagacata
ataaaagaagatgcatctaaaccctccacactcagccgggttttagatggtatcggtaca
gcagctactttcgtcttgcctggtttcatacctaaagcgattggtgctggtctgtccttc
ctctcacggcttttttga
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