Triplophysa rosa: 130554128
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Entry
130554128 CDS
T09216
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130554128 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130554128 (wdr33)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130554128 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
130554128
NCBI-ProteinID:
XP_057189553
LinkDB
All DBs
Position
LG5:13993883..14008916
Genome browser
AA seq
1079 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGYYNDLVPPVGMLSNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPFKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGMFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSIAAIPGMGIPEQLKAAMEQEQIGKETVTESEMSIPGLDWGMEE
VMQKDLKRAPTKKVPYAKPIPAQFQQAWAENKVPAMPPGEVPKERKDEKKVDGKKKTQAE
IEQEMAALQYTNPMLLEQLKIERMAQLQEQGMPPAGQSGPMPPFPGQGGPMPPPPQGFPQ
SMPPQQMSHNMPPPGPGGMPGPFIPPGQMGPQGPPMHQGPPPQGMMGPPDMHGPPRHPGP
HRNMGPQGPPGMPSGPRGMQGPPPGPGGPPGGMMGPPPRGQGPPQGGMMHQDMRGPVPHG
NIMGPQGPMSGGMMGPPPRTHGNMQGMGNMHGMGPPPGGMHGPPNNMQGPPGNIQGPPPY
MQGKPPHMGDGSRGQFNKGQNSGPQSMMHGMGQQGPNTKGDGSRGPPNHHMGPPPERQGP
GGPGQGSDGGQYWGEEGGYQEGWRRGPGDPRSHRGGSGSQWESQEMFSSHDEEYMGHDGY
DGYEGSGEEFEQRPRRPPHGDESYRRGGISGRGGMGGYQDEYGGDESFDSQEEMGQGWGG
RGRPRGGPPRGGHDGYRDGQRPDHSMHDSPSPASRERSSSLQGMDMASLPPRKRPWHDGP
GTGDMDSPSTGPDDRGAGRPPTRDDGGYGPPSRGGRGGWGRGGPPNRPPRGVMRGGRGR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatatcggctctcctccccgattcttccacatgcctcgatttcagcaccag
gcacctcggcagctcttctacaagaggccagactttgcccagcagcaggccatgcaacag
ctcacttttgatggcaagcgcatgaggaaagctgttaaccgcaagaccatcgattataat
ccctctgtcatcagatatctggagaaccgattgtggcagcgagatcatagagatttccgt
gctattcaaccagatgcaggctactacaatgatcttgtacctccggttggtatgcttagt
aaccctatgaatgctgttacgacaaagtttgtcagaacctccaccaacaaagtcaaatgc
cctgtgtttgttgtgcggtggacccctgaaggcagacgacttgtcaccggtgcctccagt
ggggaatttactttgtggaatgggctcacctttaactttgagacaattctgcaggctcat
gacagccctgttagagcaatgacctggtctcacaatgacatgtggatgttgactgccgac
cacggaggttacgtgaaatactggcagtccaacatgaataacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctctcctacggataataaatttgccacttgc
tctgatgatggaactgtacgcatctgggactttctgcgctgtcacgaggaaagaattctg
agaggtcacggagcagatgtgaagtgtgttgactggcatccctttaagggcttggtggta
tctggcagcaaagacagccaacaacctatcaaattctgggaccccaagactggacagagt
ttggcaacactacacgctcataaaaacacagtcatggaagtgaagtggaacctcaatggc
aattggttgttgacggcatcacgtgaccatttatgcaaactgtttgacattcgcaacctg
aaggaggagctgcaagtttttagaggacacaagaaagaagccacagctgtagcttggcac
ccggttcatgaaggcatgtttgccagtggaggatctgacggatctttgctattctggcat
gcaggtgtggaaaaggaggtgggagggatggagatggctcatgaaggaatgatctggagt
ctggcctggcatccgcttggtcatatcttatgttcagggtctaatgaccacaccagcaaa
ttttggaccaggaatcggccgggcgacaagatgcgggatagatacaatctaaacttgttg
ccagggatgtcagaggatggggtggagtatgatgacttggagcccaacagtattgcagcc
attcctggcatggggatcccagaacaactgaaggctgccatggaacaagaacaaattggt
aaagagactgtgacagagtctgagatgagcatcccaggactggattggggaatggaggag
gtcatgcagaaggacctgaaaagggctccaaccaaaaaagttccctatgcaaaacccatt
ccagctcagtttcaacaggcttgggcagagaataaagttccagcgatgcctcccggagag
gttccaaaggaaaggaaggatgagaaaaaagtggatggcaagaaaaagactcaagcagag
attgagcaggaaatggctgccctccagtatacaaaccctatgctgctggagcaactaaag
atcgaaagaatggcacagttgcaggaacagggaatgcctcctgctggccagtcaggacca
atgcctccctttcccggacagggtggtccgatgccccctcccccacaaggctttcctcag
tcgatgcccccccaacaaatgtctcacaacatgcctccacctggccctggtggaatgcct
ggtccatttatacctccaggtcaaatgggtccacaaggacctcccatgcaccagggtccc
cctccacagggcatgatgggacctccagacatgcacggacccccacgtcatcctggccct
cacaggaacatgggaccccaaggtcctcctggcatgccatctggccccagaggcatgcag
ggtcctcccccaggtcctggtggacctcctggtggtatgatgggaccaccaccgcgagga
cagggaccaccacagggaggtatgatgcatcaggatatgaggggtcccgtgcctcatgga
aacataatgggccctcagggtcccatgtcagggggtatgatgggacctccgcccaggact
catgggaatatgcagggcatgggaaatatgcatgggatggggcctcctccaggtggtatg
catggaccaccaaacaacatgcagggtcccccaggaaacatacagggccctccaccatat
atgcaaggcaaaccaccacacatgggtgatggaagcagaggacagttcaataagggacag
aattctgggcctcaatcaatgatgcatggcatgggacagcagggccccaacaccaaagga
gatggatctcgaggaccacctaaccatcatatgggacctccaccagagcgacaaggccca
ggaggaccaggtcagggctctgatggggggcagtactggggtgaagaggggggttatcaa
gagggctggagaagaggtcctggagatcccaggagccatagaggaggctcaggaagccaa
tgggaaagccaggaaatgttctcctctcatgatgaagagtatatgggacacgacgggtat
gatgggtatgaaggctctggtgaagagtttgaacagagaccgagacggccaccacatggt
gatgagtcgtacaggaggggtggcataagcgggcgtggtggaatgggaggctatcaagat
gagtatggtggagatgaaagcttcgattctcaagaagaaatgggccaaggttggggtgga
agaggcagaccacgtggcgggccaccaagagggggtcatgatggctatcgggatggtcag
cggccagaccatagtatgcatgatagtccctcgccagcaagtagggagcgttcctcatct
ctacagggtatggatatggcatcattgccaccacgcaaacggccatggcatgacggccca
ggcacaggagacatggactctcccagcacgggacccgacgacagaggagcaggtcgacca
ccaacaagagatgacggtggatatgggcccccatcacggggaggacgaggtggctggggc
cgtggtgggccccctaacaggcctccacgcggtgttatgaggggaggtcgaggccggtag
DBGET
integrated database retrieval system
