Triplophysa rosa: 130554142
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Entry
130554142 CDS
T09216
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
tros03015
mRNA surveillance pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130554142 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
130554142 (acin1a)
03015 mRNA surveillance pathway
130554142 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130554142 (acin1a)
03041 Spliceosome [BR:
tros03041
]
130554142 (acin1a)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130554142 (acin1a)
Spliceosome [BR:
tros03041
]
Complex C
Other components
EJC/TREX
130554142 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
130554142
NCBI-ProteinID:
XP_057189578
LinkDB
All DBs
Position
LG5:1045045..1060419
Genome browser
AA seq
1661 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSSHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAENDGTDQEDHTEANDSKV
CPAPAQDDQHKPTASEGDDHREKEQPSPSVPAQPGAIASLSVRVVGERGPTSSRAPADSD
DDSEGGDDNDNEKEECKMNAQRSVPKSQPVRERSGGSQQQQHPPPQHIPLLSQQLRQPTP
PPSPPPELSFPLPDTPKQSPPSPGELPSRQRMSSSSSSGSTSSDSRSSSPEPAGDSSERR
PGPLTLLARKMESEGAFSGAGKHERQAVPAGRGHKEGVVSAITHTANAASVLSYPSSVIS
NQGVSVVRTAVIEESDAMKQDGEGHLLWEQEKRERQKEQERLKALEKEREEKEKALEQER
QEREEALKREREERERALQREREEKAKALELERERALERERALERERLEREQALERERIE
KEQALERERVEREKAMERERLERERVEREKAMERERLERERVEREKALEMEKLERERMER
ERLECERVEREKALEMERLERERIEREKALEMERLERERLERERLERERIEREKALERER
LERERLERERALEKERLDRERLERERIEKEQALERERLEREMIEKEQALERERIEKEQAL
EKERLEREAALERERQEMEKERKRQEKQEREMALERERLEKEKAALEQERLQREQALERE
KEAQKKAKEEKERALEKEREERALQEEKQRASAEKEIRAREEKEKALKQEREEEREKERE
SRLPPLKRGRDIGGFSRSVAHPESQSEKPEDSEDARSTEPVPQESPTPATPLSSQLSSKK
SRFLRDAPTTPLPSSPASVLKRPRSFSDKPVPQAPVIPLAAIPGDAVQDDADQASQTPLQ
TVRQKVLVSAPRGLESKTPDHSEDAQKHEEEKMVVSEAPKGLQDSETSEDTKRETPGRVE
DEGKSPSPPPGEKKRGREREKKEMEKRERKSSSSSDSSSSDSDSGSSSSSRSSSSSSSSQ
EKTRTSSADRKSKEIQKESSRHMDEVIQSEAVIEKPPTAQRKKRVFTEQEEKYVSNVDVV
QTKRPCLEPQDEKETGGRKEHIGEDDIMEYTTSEVKETVMAEPEKLPESSEESTTPKTFS
ARKISLSSSKPSPGVVNSEGETEGTSGAAAGRKRRWGSSTAVTAKKPSISITTDSLKSLI
PDIKPSLGQESVLDLHPEEVPLSGDEEGGERGDQDLKIRRTVTQVVPSDTQENGQKESKR
DDRGDEEERNDRQDRLSQEEKIKDSVQISMDAENSSPGHDVDVKTVTHSDTLIRRSISQQ
KSGVSITIDDPVRTSKQPSPPRSKLSNIIHICNLVRPFTLGQLKELLNRTGAVVEDGFWI
DKIKSHCYVTYSSTEEAMATRTALHGVKWPQSNPKFLSVDFCNQEELDFHRGLGPAGEKP
PEETQRVAAAGPGRTVPPPLLPERDQWAEREREMERRERARADREWDRDKVRDLSKPGEE
REAGARRSRSRERERRRKERGKSKERKADKKEKGPEEPPAKLLDDLFCKTKAAPCIYWLP
LTEEQAAQKAEARAERMREREKRRKEMEEEEVKKREEERRERMKASGAAGGDGERDRDRG
RERDREGDKRKEGYRRPGGNSASGSRRSRSRSDPPPRDRRR
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctagacggcaggccgctccattcgctccgggtggcg
gatttgaaagccgcgttggaagagagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctgaagggggctctcatgttggagaaccttcagaaaacctcttctcaccac
attggcctgcagcccaactcccggattggggaggagatgagccagaacagtttcattaaa
cagtacctggcgaaacagcaagaactgctcaggcagcgcttggagagagaggcgcgggaa
gctgctgagaatgatggaacagatcaagaagaccacacagaagccaatgacagcaaggtc
tgccctgcccctgcccaggatgaccaacacaaacccacagcaagtgagggtgatgatcac
agagagaaagaacagccatcaccctccgtacctgctcagcctggggcgatagcttctttg
tcagttcgggttgttggtgaaagagggccgacctcaagccgtgcaccggctgacagtgat
gatgacagcgagggaggggatgacaatgacaacgagaaggaagagtgcaaaatgaatgct
cagcgaagtgtgccaaaaagccagccggtgagggaaagatctggtggctcacagcaacag
cagcatccacccccccaacacatacccttgttatcacagcagctgagacagcccactccg
cccccgtcccctccacctgaactctcattcccactcccagacacccccaaacagagcccc
ccaagtccaggagagctcccgtctagacagcgcatgtctagctcttccagctccggcagt
acgagtagtgacagtcgtagcagtagccccgaaccagcaggcgattcctcagaacgcaga
ccaggtcctctgaccttactggcgcgaaagatggagtctgaaggagctttctctggagct
ggaaagcatgaaagacaggccgtacctgcaggacgaggccacaaagagggagtcgtgtct
gcaattactcacacagccaatgcagcatcagttctgtcataccccagttcggtgatctcc
aaccagggagttagtgttgtcaggacagcggtgatagaagagagcgatgccatgaagcag
gatggggaaggccatcttttgtgggagcaggaaaagcgggaaagacaaaaagaacaagag
aggctgaaagctcttgaaaaggagagagaggaaaaggagaaggcattggagcaagaaagg
caggaacgagaagaagctctaaaacgggagagggaagagagagagagggctttacaacga
gaacgggaagagaaggcgaaggcgttggaactagagcgagaacgagcgctggaaagggag
cgagcgttggagagagaaaggctggaaagagagcaggctctggaaagggagaggattgaa
aaagaacaggctctggagcgagagagggtagaaagagaaaaggccatggaaagggagaga
ctggagagagagagggtagaaagagaaaaggccatggaaagggagagactggagagagag
agggtagaaagagaaaaggctctagaaatggagaaactggagagagagaggatggagaga
gagagactggagtgcgagagggtagaaagagaaaaagctctagaaatggagagactggag
agagagaggatagaaagagaaaaggctctagaaatggagagactggagagagagagatta
gaaagagagagactggagcgagagaggatagaaagagaaaaggctctagaaagggagaga
ctggagagagagaggttagaaagggagcgagctctagaaaaagagaggctggaccgagaa
aggttggagagagagaggatagaaaaagagcaagctctggaaagagagagactggagaga
gagatgattgagaaagagcaagctctggaaagagagaggatcgaaaaagaacaagctttg
gagaaggaaagacttgaaagagaagccgctttggagcgagagagacaagaaatggagaag
gaacgcaagagacaggagaagcaagagagagagatggccttagaacgagaaagacttgag
aaggagaaagcagctttggaacaagagcggttgcagagagagcaagctctcgagcgtgag
aaggaggctcaaaagaaagcaaaggaggagaaagagcgagccttggaaaaagagagagag
gagagggctttacaagaggagaaacagagagcatcggcggagaaggaaataagagcgcgg
gaagaaaaggaaaaggctttgaaacaagaacgagaggaggaacgagagaaagaaagagaa
agtcgtcttcctccgttgaagcgtggtcgtgatatcggtggtttctctcgttcagtggcc
catcctgagagtcagtcggagaagcctgaggatagtgaagatgctcgatctacagagcct
gtcccacaagagtcacccacacctgcgacaccattatcctctcaattgtcctctaagaag
tctcgctttctcagagatgctcctacgactcctctcccatcctctccagcttctgtgtta
aagagacctcggtccttctcagacaaacccgtgccacaagcccctgtaattccgttagca
gctatacctggagatgcagtgcaagatgatgccgatcaggcttctcaaacaccactacag
actgtgaggcagaaggtccttgtttcagctccccgtgggttagagagcaagaccccagat
cattcagaggatgctcagaaacacgaggaagagaagatggtggtgtcagaggcacccaaa
gggctgcaggacagtgaaacaagcgaagacactaaacgcgagacgcccgggagagttgag
gatgaagggaaatctccatcgcctccaccaggagagaagaaaagaggaagggaaagagaa
aagaaagagatggagaaaagagaaagaaaatcgtcgtcgtccagcgatagttcctcatct
gactcggattctgggtcttcatcctcctcgcgttcctctagttcatcatcatcctcgcag
gagaaaacccgtactagttcagctgataggaagtcgaaggaaatccagaaagagtcgtct
cggcacatggatgaagttatccaatctgaagctgtgattgaaaagccacccacagcccag
cgcaaaaaacgagtcttcacagagcaggaggagaaatatgtcagcaatgtagatgtcgtt
cagactaagagaccctgccttgagccacaggatgagaaggaaacaggaggaagaaaggaa
catattggggaagatgatattatggaatacactacaagtgaggtgaaggagacagtcatg
gccgagcctgagaagctaccagagagcagtgaggagagcaccacgccaaagaccttctct
gcccggaaaatctcactcagcagcagcaaaccgtctccgggagtggtgaattcggaagga
gaaactgagggcacaagcggggctgctgctggcaggaagaggagatggggctcaagtaca
gctgtcactgccaagaaaccctccatcagcatcaccacagactctctaaagtctttaatt
cctgacatcaagcctagcttgggccaggagtccgttctagatctgcatccagaagaggtg
cctctttctggggacgaggaaggcggggagagaggtgaccaagacctgaaaatcagacga
actgtgacacaggtcgtgccctctgacacacaagagaatggacagaaggaatccaaaagg
gatgatcgtggagatgaggaggaaagaaacgacagacaggatagacttagccaggaggag
aaaataaaagactccgttcagatttccatggacgcagagaactcttcccctggccatgat
gtggacgtgaagacggtgactcacagtgacacattgatcaggcgttccattagccagcag
aagtctggagtaagcatcaccattgatgacccagtccgcacatccaagcaaccgtctcct
cctcgtagcaagctgtctaacatcatccatatctgcaacctggtgagaccgtttacgctg
ggccagctgaaagagctgctgaaccgcactggtgctgtagtcgaggacggtttctggatc
gacaagattaaatctcattgctacgtcacatactccagcacagaagaggcaatggccaca
cggacggcactacatggggttaaatggccccagagtaatccaaagttcctcagtgttgac
ttctgcaatcaggaggaattggacttccataggggtctaggtccggcgggagaaaagcca
ccggaggagacccaaagggtagcagctgccgggcctggccgtacggttcccccacctctc
cttccagagcgtgaccagtgggctgaacgagagagggagatggaaaggcgggaacgtgcg
cgtgcagatagggaatgggaccgagataaagtgagagacttgagcaaacccggagaagaa
cgggaggctggggccagacgatcgcgatctagggagcgcgagagaaggcgtaaggagaga
gggaagagcaaagagagaaaggcggacaagaaggaaaaaggtcccgaggagccacctgct
aaactgctggatgacctgttctgcaaaaccaaagcagccccctgcatatactggctcccc
ctcactgaagaacaggcagcacagaaggcagaggctcgtgccgagcgcatgagggaaaga
gagaagaggagaaaggagatggaggaggaagaggttaaaaagcgcgaagaggagcgcagg
gagagaatgaaggccagcggtgccgccggaggagacggcgagagagaccgtgacagaggt
cgagagagggatcgggagggggataagcgaaaggaaggatatcgcaggcctggcggaaac
agcgcaagcgggagcagaaggtcacgaagccgcagtgaccctccacccagagatcgacgg
cgctaa
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integrated database retrieval system
