Triplophysa rosa: 130554148 Help Entry 130554148         CDS       T09216                                  Symbol copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism tros  Triplophysa rosa Brite KEGG Orthology (KO) [BR:tros00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tros04131]     130554148 (copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tros04147]     130554148 (copa) Membrane trafficking [BR:tros04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     130554148 (copa) Exosome [BR:tros04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    130554148 (copa)   Exosomal proteins of bladder cancer cells    130554148 (copa) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  130554148 NCBI-ProteinID:  XP_057189584 LinkDB All DBs Position LG5:480188..491356 Genome browser AA seq 1224 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE VRGISGVDLFGVSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK RSLATVKIAKVKYVVWSADANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL EKEVVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMVADLDMDTS GVEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGEGWDVEEDLDLPPELDVPSVGGGG AEGEGFFVPPTKGTSPTQTWCNNSQLAVDHILAGSFETAMRLLHDQVGVVQFGPYKQIFM QTLSRGHTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG RFEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQ QKRLCEMAAYFTHCSLQPIHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ TRKILAACEKNLTDAHQLNYDPHNPFDICAASFVPLYRGRPVEKCPLSGACYCPKYKGEV CRVTHVTEIGKDVIGLRVSPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgctgaccaaatttgagacaaagtcggcccgagtgaaagggctgagttttcatcccaag cggccctggattctcgccagtctgcacaatggagtcatccagctttgggactatcgcatg tgtactctcattgacaagtttgacgagcacgatggtccagtcagaggtattgacttccat aagcagcagccgctgtttgtgtcgggaggtgatgactacaagatcaaggtctggaactat aaactgcgtcggtgtcttttcactcttttgggacatcttgactacattcgcaccaccttc ttccaccacgagtatccctggatcctgagcgcctcagatgatcagaccatccgcatttgg aactggcagtccagaacgtgtgtctgtgtgctgactgggcataatcactatgtgatgtgt gctcagttccatccctctgaagacctggtggtgtcagccagcctggatcagacagtgcgc gtgtgggatatttccggtctgaggaagaagaacctgtcccccggggctgtggacacagag gtgcgtggcatctctggtgtcgacctgtttggggtctcagatgctgtcgtgaagcacgtt ctggagggtcatgatcgaggggtaaactgggcagctttccatcccagcatgcctctcatt gtatcgggagcagatgaccggcaggtgaagatctggagaatgaacgagtcaaaagcatgg gagttggacacctgtagggggcactacaacaatgtgtcctgtgcagtgtttcaccctcgc caggagctcatcctgtccaactctgaggacaagagcatccgcgtgtgggacatgtccaag agaacaggcgtccagacctttcgcagagaccacgaccgtttctgggtgctgggagctcat cccaacctcaacctgtttgctgccggtcatgacagcgggatgctggtgtttaagctggag agagagcgtccggcctatgccgtgtacggtaacatgctgtactatgtgaaagaccgattc ctgcgtcagctcgatttcaacagcagtaaagatacagcagtcatgcagctgcgcagcgga tcaaaattcccggtgttcagtatgtcctataatcctgcggaaaacgccgtgttgttgtgc accagagccactaacctggaaaacagcacatatgacctgtactccatccccagagagagt gactcgcagaatcctgacgcgcctgagggtaaacgctcctccggcctgactgcggtgtgg gtggccaggaaccggtttgccgtgctcgatcgcatgcattcactgctgataaagaatctg aagaatgagatcgtgaagaaggtgcaggtgccgagctgtgaggagatcttctatgctggg acggggtctctgttactgcgggacgctgatggagtcacgctgtttgacgtgcagcagaaa cgctccctcgccacggtcaaaatcgccaaagttaaatatgtggtgtggagcgctgatgcc aaccacgtggccctgctggccaaacacgccatcatgatctgcaacaaaaagttagagagc ctgtgcaacatccatgagaacatccgagtgaagagcggtgcctgggctgagaatgaagtc ttcatctacaccacctccaaccacatcaaatacgctctcacctcaggtgatcacggtata attcgtacacttgacctgcccatctacgtgacgagagttcgaggcaacagtgtgtactgt ctggatcgcgagtgcaggccacgagtgctcaacatcgatccaaccgagtaccgtttcaaa ctggctctggtcaatcgtaaatacgaggaggttcttcatatggtgcgtaatgctaaactg gtgggccagtccatcattgcctacctgcagaagaagggctacccagaggtcgcgcttcac ttcgtgaaggacgagaagactcgcttcagcctggcactggagtgtggaaacatcgaggtg gcactggaagccgcaaaagctctggatgaacgtagctgctgggagcgtctcggcgaggcg gctcttctccagggtcatcaccaggtggtggagatgtgctaccagagaaccaagaacttc gacaagcttaccttcctgtacctcatcactggaaacctagccaaactcaggaagatgatg aagatagccgagataagaaaagacatgagcggacactatcagggcgctctttacctgggt gacgtcagcgagcgtgtgcgaatcctgaagaactgcggacagaagtctctagcgtacctg actgcggccactcatgggatggatgaagaagccgaagccctcaaagaaaccttcgacctg gagaaggaggtggtgcctgaggtcgaccccaacgctcagttgctgcagccaccacctccc atcaaccctctggacaccaactggcctctgctcaccgtttctaagggcttctttgaggga gccattgctgccaaaggaaaagcaggacagatggttgccgatctggatatggatacttca ggagttgaaggctggggagaagatgcagagcttcatttggatgaagatggattcatggat gctcaggagggattaggagacgagggagctatcgggaaggaggaaggcgaaggctgggat gttgaggaagatctggacctccctcctgaactggatgtgccttctgttggtggaggcgga gctgagggagaaggattctttgtaccgcccaccaagggcacaagccccacccagacatgg tgcaacaactctcaactggctgtggatcatattctagccggatccttcgagaccgctatg aggttgctgcacgatcaagtcggcgtggttcagttcggaccctataagcagattttcatg cagaccttgtcccgtggtcacacgtgttacctgggcctgccgtctctgccctgcttgcac agttacccccagaggaactggaaggacagcggggctaaaggaggcctgccagcggtcggc ctgcgtctgtctgacctcatttcgcgtctgcagcagtgctaccagctgaccacggcggga cgcttcgaggaagccgtggaacgcttcagggccattctgctctcggttcctctgctcgtg gtcgacaacaaacaagagattgcagaggcacagcagctcataaccatctgtaaagagtac atcatcggcctcacgatggagacggagaggaagaaacttcctaaagacactctagatcag cagaagcggctctgtgagatggcggcgtacttcacacactgcagtctgcagcccatccac atggtgttggtgttgagaacggctctcaatcttttcttcaaactccgtaacttcaaaacg gcagcgggattcgctcgtcgtctcctcgagctcggccccaaaccagaggtggcccaacag acacgaaagattcttgcagcatgtgagaagaacttgacagacgctcaccaacttaactac gacccacacaatccctttgacatctgcgcagcctcgttcgtccccttgtaccgcgggcgg cctgtagagaagtgccccctgtccggagcctgctactgccccaaatacaaaggagaggtg tgcagggtcacacacgtaaccgagatcggtaaagacgtcattgggttgcgcgtcagcccg ctgcagttccgctga

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