Triplophysa rosa: 130554232
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Entry
130554232 CDS
T09216
Symbol
rorab
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130554232 (rorab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tros03310
]
130554232 (rorab)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130554232 (rorab)
Nuclear receptors [BR:
tros03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130554232 (rorab)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Hera_RBD
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
130554232
NCBI-ProteinID:
XP_057189731
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Position
LG1:complement(16090375..16134760)
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AA seq
526 aa
AA seq
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MESPPEPVTVPDKSASAAGASLEDSPVKLEGKAETDKPAPVRRQSCSSTNKDVSPAKKAH
TSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQLQQEKADEDTEDGREPQP
PGEAEPLTPSYALSTTGVTELPDDISRYVNGQTSEGGKADSAIGGFYLDIQPSPDQSGLD
MDGIKLEPVCDLSSDSGLDQYCCYSNGDSSPPDSDLEHLSENICKSHLETCQYLREELQP
SNWQTVLQTDLDTYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLSSLQLTE
DEIGLFSAYVLMSADRSWLQEKTRVEKLQQKIKLALQNLLQKNQRDEGILTKLVCKVSII
RMLCRRHMEKLSAFRALYPEMVHTRFPPLYKELFGSDFEQVLPQEA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccgccagagcccgtcacggtgccggacaagagcgcttctgcagcgggcgct
tcgctggaggacagcccggtgaaactggaaggcaaggctgaaaccgacaaaccagcacca
gttaggcgacagagttgctcaagtaccaacaaggatgtatccccagcaaagaaagcacac
acatctcagattgagagtattccttgtaaaatctgtggagataaatcatcagggattcat
tatggtgtcatcacctgtgagggatgcaagggtttcttcaggaggagtcagcagggcacc
gtgtcatattcttgtcctcggcagaagaactgtctgatcgaccgcaccagcagaaaccgc
tgccagcactgccgcctgcagaaatgcttagcagtgggcatgtcaagagatgctgtgaag
tttggccgcatgtctaagaaacagagggacagtctgtttgccgaggttcagaaacaccgt
cagcagctgcagcaggagaaagcggatgaagatacagaggatggacgggaacctcaacct
cctggagaggcggaaccgctcacaccctcttacgccctgtccaccactggggtcacagag
ctccctgatgacatcagcagatacgtcaacggtcagacctcagaggggggaaaggcagat
tcagcgattggtggattttacctggacattcagccctctccagaccagtcaggtctagac
atggatggcattaaactagaacctgtgtgcgacctcagctcagactctggtttagatcaa
tattgttgctatagtaatggagactcttccccacctgacagtgatctagaacatctgtca
gagaacatctgtaagtctcacctggagacgtgccagtatctcagagaagagctacagccc
agcaactggcagacagtcctacagaccgacctggacacgtaccagaagaagtctcaggag
gacatgtggcagctgtgtgcggttaaagtcactgaggctgtgcagtatgtggttgagttt
gccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctgctcaaa
gcaggttctttagaagtcgtgtttgtgaggatgtgtcgggcgtataactcccagaacaac
acagtctttttcgacagcaaatacgcagggccggaagtcttcaaagctctgggctgtgat
gatcttatcagctccgtgtttgagtttgctaagagtctgagctctctgcagctcaccgaa
gatgagatcggcctcttttcagcatatgtgctgatgtctgcagatcgctcctggctgcag
gaaaagaccagggttgagaaactccagcagaagatcaagcttgccctgcagaacttactg
cagaagaaccagagggatgagggaatactcacgaagctggtctgcaaagtttccatcatc
cggatgctgtgtcgtcgacacatggagaaactgagtgcgttcagagctctgtacccagaa
atggtccacacgcgcttccctccgctttataaagagctgttcggctcagactttgagcag
gttttgcctcaggaggcctga
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