Triplophysa rosa: 130554331
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Entry
130554331 CDS
T09216
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130554331 (ptbp2b)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130554331 (ptbp2b)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130554331
NCBI-ProteinID:
XP_057189876
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All DBs
Position
LG5:complement(11604841..11619778)
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AA seq
538 aa
AA seq
DB search
MDGIASDVAVGVKRSSDELLSGSLYNSPNSSVTANGNDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGESVLTPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAAALSKDSTSLLGTPA
GMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNEEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEDDLRL
LFSNSGGTVKAFKFFQDRKMALLQMATVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagcgatgttgcagttggtgtgaagagaagctcagatgaattgctg
tctggcagtctctacaacagtccgaactcttcagtcactgctaatggaaatgacagtaag
aaactgagggtggaggacagcatggacagtccgccgtctcgagtcattcatatccggaaa
ctcccaaatgaggtttccgagactgaggtcattgccctgggtttgccttttggaaaggtc
accaatattctgatgcttaaaggcaaaaaccaggcatttttggagcttggaacagaggaa
gcagctgttaccatggtgaactactacacagctgttacaccacaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagaactcaagactgacagtgctctcaaccagcgg
gctcaggccgtgctgcaggcagtgtcagcagtccaggagggtggctctccaagctcagac
acggcgggcgagagtgtgttaacgcccgcacccagtccagtgctgcgaataatcatcgac
aacatgttctacccagtcaccctggatgtcctccagcagatcttctccaagtttgggaca
gtcatgaagataatcacatttaccaaaaataatcagttccaggctcttctgcagttcagt
gatccagtgaatgcccagcaggccaaactgtccttggatggccagaacatatacaattcc
tgctgcactttgcgcattgacttctccaagctggtcaacctgaacgtaaagtacaacaac
gacaaaagtcgggattacacccgccccgagcttcctgcaggagacggccagccacctgtg
gacccatctgtggccgcagctcttagcaaagactccacctccttgctcggtaccccagct
ggaatggtaacttcctacagtagtggtggagggtttccatcttctctaggggccatcagc
cctctgagcgcggcggcagcggcggcggcagcagccggaagggtggcgttgtcggggcat
tctggacctggcggtgtgctactggtcagcaatctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggtgtctatggtgacgtgcagcgcgtgaagatcctttacaat
aagaaggacagtgccctcatccagatgtccgatggaaaccaggcccagttagcaatgagc
catctgaatgggcagaagatgtacggcaagataattcgagtgaccctctccaaacaccag
acggtacagctgcccagagagggtttagatgatcagggtttgaccaaagactttaccagt
tctcctctgcatcgcttcaagaaacctggatctaagaatttccaaaacatcttccccccc
tcagctacgctccatctctctaacatccctgagaatgtgaccgaggacgatttacgactg
cttttctcaaactctggcggaacagtgaaagcgttcaagtttttccaggatcgcaaaatg
gctctgctgcaaatggccacagtggaagaggcaattcaggcactcatcgaccttcacaac
tatgatatgggtcgtggtcatcgcctgagagtgtccttctcaaagtccactatctga
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