Triplophysa rosa: 130554452
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Entry
130554452 CDS
T09216
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
tros
Triplophysa rosa
Pathway
tros03272
Virion - Hepatitis viruses
tros04382
Cornified envelope formation
tros04514
Cell adhesion molecules
tros04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130554452 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130554452 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130554452 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130554452 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tros03037
]
130554452 (cldn1)
04147 Exosome [BR:
tros04147
]
130554452 (cldn1)
04515 Cell adhesion molecules [BR:
tros04515
]
130554452 (cldn1)
Cilium and associated proteins [BR:
tros03037
]
Other cilia and associated proteins
Stereociliary proteins
130554452 (cldn1)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130554452 (cldn1)
Exosomal proteins of colorectal cancer cells
130554452 (cldn1)
Cell adhesion molecules [BR:
tros04515
]
Immunoglobulin superfamily
L1 family
130554452 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF202
DUF308
DUF3112
DUF6232
DUF4064
Motif
Other DBs
NCBI-GeneID:
130554452
NCBI-ProteinID:
XP_057190104
LinkDB
All DBs
Position
LG5:complement(29827427..29830557)
Genome browser
AA seq
209 aa
AA seq
DB search
MANAGLQLLGYTLAFLGLIGLIASTSMAEWKMSSYASDNIITAQAMYEGLWQACVHQSTG
QMQCKVYDSLLQLPGEIQSTRGLMITSILLGAVALMVAAVGMKCTTCLADDKQQKSKVAL
AGGVLFIVAGVLALAATSWYGDKIRRKFFDPFTPTNSRYEFGKALYVAWGASALTLIGGS
MLCCNCGSKATGKSYPPPRTAGRPGTDRV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcagggctccaacttctcggctacactttggcttttttgggacttattggt
ctaatagcttctacatccatggccgagtggaagatgtcttcatacgccagtgataacatc
atcacagctcaggccatgtatgagggtctctggcaggcctgtgtgcaccagagcaccgga
caaatgcaatgcaaagtctacgactcgctgttacagctaccaggggaaattcagagtact
cgaggtctcatgatcacctccatcttactgggtgctgtcgctctgatggttgctgccgtt
ggtatgaagtgcaccacatgcctggcagacgacaagcaacaaaagagcaaagttgccctg
gccggaggcgtcctcttcatcgttgcaggggttcttgctcttgctgccacaagctggtat
ggagacaaaataagacgcaagttctttgatccattcactcccacaaattcaaggtatgag
tttggtaaggcgctctatgtggcctggggtgcttcggctctcacgctcattggcggcagc
atgctctgctgtaactgtggaagtaaagccactggtaaatcgtacccacctccccgcacg
gcgggacggccgggaacggatcgtgtttga
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