Triplophysa rosa: 130554472
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Entry
130554472 CDS
T09216
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130554472 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130554472 (rpap2)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130554472 (rpap2)
Protein phosphatases and associated proteins [BR:
tros01009
]
HAD phosphatases
Fcp/Scp phosphatases
130554472 (rpap2)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130554472 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
130554472
NCBI-ProteinID:
XP_057190136
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Position
LG5:complement(13598882..13608415)
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AA seq
603 aa
AA seq
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MEACEVTRMIRSSKPKKKSGKGPQVRSAEDEARRREAVKETLRLKLELERKALQIVERLL
EDNMTEEFVITCVWHITPANYKDTVEERSIAKLCGYPLCSNKLNNVPTQQFKISTKTNRV
YDITERKCFCSDFCYKASKCLELQISKTPLWLRKEEIPPEIKLMKEGDRGSSGQEVKLVD
KPITKANIENPFQEVAELSRDSPPFGQSDSSDTEPDFVSSVVTKPHKHARVHWGKLPKKD
GHTDNDGPSCEENETACPERAASENIVENRSPLQKDPEISSTEVTSVNSHVEGTLELLKH
CNLEYGHTVSHQETNVPSQPETGNTTPASGGLNITQVCMSKRGAAGLKGLLKDHYKAKSA
SKAINLCLVERLRETFMEWKTEETMKFLYGPSYASETESKAQAEEELDEDDLDEAEEEEG
LRGPTKSSAPAPDFNMLRQETEQLELRVKEFYKGVCVLAEETDSVKERGDEEGRGKDPPL
PLVDSHAQHQIQKRITVEKLGRSLRDVLGPLRLTMSDVINDINNLVRTFRFTNKNIIHKS
PEWTLIAVVLLSVLTEVSPLLKESLASPSSVEYISSLMRELKLNDKDLHSLVLLFKPQII
SQA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttgtgaagtgactagaatgatccgatcctcaaaaccaaagaaaaaaagtgga
aaaggcccccaagtgaggtcagctgaagatgaagcgagacggagagaggctgttaaagag
actctcagactgaagctggaacttgagcgcaaagcactgcagattgttgagagactcttg
gaggacaacatgacggaggagttcgtcatcacctgtgtatggcacatcactcctgccaac
tacaaagacacagtggaagaacggtccattgcaaaactgtgcggatatcctctatgttca
aataaactcaacaatgtccccacccaacagtttaaaatatccaccaagaccaatagagtc
tatgatatcacagagcgtaagtgcttttgtagtgatttctgctacaaagcctccaaatgt
ttagagctccagatatcaaaaactccactttggctcagaaaggaggaaatccctcctgag
attaagctgatgaaagaaggagacagaggcagctcagggcaggaagtaaagttggttgac
aagcctataacaaaagccaacattgagaatcctttccaagaagttgctgagctttcgagg
gactcacctccctttggtcagagtgacagcagtgacactgagccagactttgtctccagt
gtcgttaccaagcctcataaacatgcacgggtacactggggtaaactgccaaagaaagac
ggacatactgacaatgatgggccaagctgtgaagaaaatgaaaccgcatgtcctgaaaga
gcagccagcgaaaatatcgttgaaaatagatctccactacagaaggacccagagatatcc
agtacagaagttacatctgttaattcccatgttgaaggaactctggagctcttgaaacat
tgtaatctagaatatggtcacactgtcagccatcaagagactaatgtcccttcacagccc
gagactggaaacaccacccctgcctctggtggcctgaacatcactcaggtgtgcatgagt
aagagaggagccgcaggcctcaaaggtctgttgaaggatcattataaagctaagtcagct
tcaaaagccatcaatctgtgtctggtagagcgtctaagggaaacatttatggaatggaaa
actgaggaaaccatgaagtttctatatggtcctagttacgcttcagaaacagagtctaag
gcacaagcggaagaggaactggatgaagatgacctggatgaggctgaggaggaggaaggc
ttaagaggtccgactaaatcgagtgcaccagctcctgattttaatatgctgcgacaagag
accgagcagctggagctgagagtgaaggagttttataaaggagtttgtgttctggctgag
gagacggattcagtcaaagagagaggagacgaagagggccgtggaaaggatcctcctctt
cctttagtggattcacatgcacagcaccagattcagaaacgcattactgtggagaagcta
ggcaggagtttgagagatgttcttggacccctgcgcctaacaatgagtgatgtcatcaat
gacatcaataatttggtcaggactttcaggttcacaaacaaaaatatcattcacaaaagc
cccgaatggactttaattgcagtagttcttctttcagtgttaacagaagtgtcaccattg
ctgaaagagtcccttgcaagtccatcatcagttgaatacatctcctctttgatgagagaa
ctgaaactgaacgataaagatctgcacagccttgtgttgctcttcaagccccaaatcatt
tcacaagcataa
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