Triplophysa rosa: 130554480
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Entry
130554480 CDS
T09216
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130554480 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130554480 (puf60a)
Spliceosome [BR:
tros03041
]
Complex A
U2 snRNP components
U2 related factors
130554480 (puf60a)
Complex B
130554480 (puf60a)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF1543
Motif
Other DBs
NCBI-GeneID:
130554480
NCBI-ProteinID:
XP_057190150
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Position
LG5:5518322..5531791
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AA seq
555 aa
AA seq
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MAVAVSAVNGGEALMMENGQSTATKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTL
AHQQQQQLTNLQLPNSLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELG
EDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQMNSIMLGGRNIK
VGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCMLVRDH
TTGKHKGYGFIEYDKAQSSLDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPA
AAVAAAAATAKITAQMAWNLSQPENRTEEFLNCLEAVAGASILGAMSAGTGLSLPQIPQA
VMAAQAPGVITGVTPARPALPVMPQVGLVNPVLASPPSLSAAVAAAQEAKKEKEKEEEES
AQDGTGQEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVT
EECGKFGIVNRVIIYQEKQGEEDDAEVIVKIFVEFSVVSEMNKAIQALNKRWFGGRKVIA
EVYDQERFDNSDLSA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtttcagcggtaaatggaggcgaggctctgatgatggagaatggacag
agcacggccacgaagctcggcctgccgccccttacccctgaacagcaggaggcactgcag
aaggctaagaagtatgccatggaacaaagcatcaagagcgtcctggtcaagcagacgctc
gctcatcaacagcaacagcagctcactaacctacagctccctaattcccttcagatggcc
tcattaaccatgggttttggagatcccctctcaccactacagtctgttgcagcccagagg
caacgagcattagccataatgtgcagagtttatgtcgggtctatctattacgagctagga
gaagacacaattcgacaggcctttgctccttttggtcccatcaaaagcattgacatgtct
tgggactctgttacattaaagcacaagggtttcgcctttgtagagtatgaagtacctgaa
gctgcacagcttgcgttagaacagatgaactctatcatgctgggcggtagaaacattaaa
gtggggcgaccttcaaacattggtcaggctcaaccaatcatagaccagttagccgaagaa
gcgcgcgccttcaaccggatttacgtggcgtctgtgcatccagacctgtcagacgatgac
ataaagagcgtgttcgaagccttcggaagaatcaagtcctgtatgctggtgcgggatcac
accacgggaaagcacaaaggctatggttttatagagtatgacaaggcccagtcctcgctg
gatgccgtgtcctccatgaacctcttcgaccttgggggccagtacctgcgagtgggcaaa
gccgtcacgcctccaatgccccttctaacgccaacgacgccaggcggccttcctccagcc
gcagccgtagcggcagcagccgccaccgccaaaatcaccgctcagatggcatggaatctg
tcccagccggagaatcggacagaagaattcctcaactgtctggaagcagtggcgggagca
tcgatcctgggagcaatgtccgcggggacgggcttgagcctgccccagatccctcaggcc
gtcatggcagctcaggccccaggggtcatcacaggggtgacaccagcccggcccgctctg
cctgtcatgcctcaggtgggtctagtgaacccggtgctagcctctccgccatcactgtca
gctgctgtggctgcggctcaagaggccaaaaaggagaaggagaaggaagaggaggaatct
gcccaagacggcacgggacaggagatgcttagtgaacaggagcacatgagcatctcgggg
agcagtgcaaggcatatggtgatgcagaaactgctgagaaagcaagagtctacggttatg
gtgctcaggaacatggttggccctgaggacatagatgatgatctggaaggagaagtcacg
gaggaatgcgggaagtttggcattgttaatagagtgattatctaccaggagaagcagggt
gaggaggacgatgctgaagtcatcgtcaagatctttgtggagttttcagtagtatcagag
atgaacaaggccattcaggcccttaacaaacgctggttcggaggtcggaaggtcatcgcc
gaggtgtacgatcaggagcgattcgacaacagtgacctctctgcatag
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