Triplophysa rosa: 130554539
Help
Entry
130554539 CDS
T09216
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130554539 (pif1)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130554539 (pif1)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130554539 (pif1)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130554539 (pif1)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130554539 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
Herpes_Helicase
UvrD_C_2
Mg_chelatase
RsgA_GTPase
AAA_7
ABC_tran
AAA_16
AAA_5
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
130554539
NCBI-ProteinID:
XP_057190244
LinkDB
All DBs
Position
LG5:13403660..13412365
Genome browser
AA seq
638 aa
AA seq
DB search
MSYIEPAELQCTVAVERLNPAGQAIKRQHIRKATVVLGRNEFQEIVMRVHDGKAPQSFML
RDFRLFTRFAKDGKCTVKFVPENTQVLISDCPPDRLKMFLKTLSIKHQASQSVKPMSHRA
KIRAGLPRSFETISPLQLKDVQKANELRSQVNSPIQLKGPSERSVNRILGERQQVKRPRP
ECDASPVKALHPNKKPVLVLPLAQKLSKDQTAVLNAVLSGKNVFFTGSAGTGKSFLLKRI
VGSLPPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCLELAQRPGVLQHWTTCK
HLIIDEISMVEAEFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKDKPNFCF
QSRSWRKCIRMNMELTEVRRQTDKTFISLLQAVRVGRVTEEVTARLLKSANHCIERDGIL
ATRLCTHKDDVELTNESKLKQLPGPMRVFEAVDSDPMLVQTIDSQSPVSRSLQLKVGAQV
MLTKNLDVQRGLVNGARGVVIDFQSGNHGLPRVKFLCGVAEVMKRERWMLKASGGHYLSR
QQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVV
QANQDVLLFYKKLRRERLLMQSSMDEFVGQRNTENDPW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagctacattgagccagctgagcttcagtgtaccgtagcagtggaacgcttgaatccg
gcaggtcaagccatcaaacggcagcacatacgcaaagccaccgtcgtattaggtcgcaac
gagtttcaggaaatcgttatgcgtgtccacgatggcaaagctcctcaaagcttcatgctg
cgtgacttccggcttttcactcgttttgcaaaggacggtaaatgtacagttaaattcgta
ccggagaacacacaggttctgatctcggactgtccgccagatcgtttgaagatgttcctg
aagacgctcagcatcaagcaccaggcatcccaaagcgtcaaacctatgagtcatagagct
aaaatacgagctggtcttcctcgatcatttgagaccatcagtcctctccagctgaaagat
gtacagaaggcgaacgagctgagaagtcaagtaaattccccgatccaactcaaaggtcct
tcagaaagatctgtcaatagaatcctgggtgaaaggcaacaagtaaagagacccagacct
gaatgtgatgctagcccggttaaagcacttcaccccaataagaagcccgtcttggttctg
cctctggcacagaagctaagcaaagatcaaactgcagttcttaatgcagttttgagtggc
aaaaatgtgtttttcacaggcagtgcaggtacaggaaagtcatttttgctgaagaggatt
gtgggctctctgcctcccaaaagcacctttgctactgcgagtactggtgttgcagcttgt
cacataggagggaccacactgcacaattttgcaggtattgggtctggctctgctcctctt
gaacagtgtcttgagcttgcacaacgtcctggagtgttgcagcactggaccacttgtaaa
catctcattattgatgaaatctcaatggtggaggcagagttttttgacaaactggaagca
atagccagatctatcagaagatctactgaaccatttggagggattcagctaatagtgtgt
ggagactttcttcaacttccacctgtaacaaaaggaaaagacaaacctaatttttgtttc
cagtctagaagctggagaaaatgtatccgtatgaatatggagctgacggaggtgcgcaga
caaaccgataagaccttcatatctctcctccaggctgtgagagtgggcagagtcacagag
gaagtaaccgcacggctcctgaaaagtgccaatcactgcatcgagagggatggtatccta
gcaaccagactatgcacacacaaggatgatgtggagctcactaatgagagtaaactcaaa
cagttaccagggcctatgcgagtgtttgaggctgtggacagtgaccctatgctggttcag
actattgactctcagagtccagtgagtcgctcgttacagcttaaagtgggagctcaggtc
atgcttactaaaaacctggatgtccaaagaggtctagtgaatggagcaagaggtgtagtg
attgacttccagtcgggaaatcatggtctcccacgagtgaaattcctctgcggggttgcc
gaggtaatgaagagagagcgctggatgttaaaagcatcggggggtcattacttgagccga
caacagctgccgctcaaactagcctgggccatttcaatccacaagagtcagggcatgact
ttggattgtgtggagatttccctggcccgtgtctttgagagtggccaggcatatgtcgct
ctgtcccgtgctcggagtctggaaggcttgcgtgtgatggactttgatccacgagtggtg
caggccaaccaggatgtgctgctcttttataaaaaactgagaagggaaaggcttcttatg
cagtcctcaatggatgagtttgttggacagcgcaatacggagaatgatccttggtga
DBGET
integrated database retrieval system
