Triplophysa rosa: 130554580
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Entry
130554580 CDS
T09216
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
tros
Triplophysa rosa
Pathway
tros03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130554580 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130554580 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130554580 (pcdh7b)
Protein phosphatases and associated proteins [BR:
tros01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130554580 (pcdh7b)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Protocadherins
130554580 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
LYRIC
Mid2
Motif
Other DBs
NCBI-GeneID:
130554580
NCBI-ProteinID:
XP_057190320
LinkDB
All DBs
Position
LG1:complement(30229937..30348149)
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AA seq
1240 aa
AA seq
DB search
MRTTGLVDCLSYCFLILQLLSQPAAKQVLRYRLAEEGPADIRVGNVAADLGITAGMDVTF
TLESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDL
FEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDN
GDVRRIGTSGTGGVDTHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQR
DSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYETDLPENSSPGAPILQLK
AGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARDRG
QPPKTDKATVVINIKDENDNVPNIDIRKIGRIYLKDGVANVAEDVIVDTPIALVQVSDRD
KGQNGIVTCTVVGDVPFQLKPASEVEGEMNKKKYFLHTSAPLDYEAVQEYNVVIVAVDSG
SPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEIS
YSLDSSVSGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVAD
KNDNEPKFMQDVFTFYVKENLQPNSPVGMVTVMDSDKGQNADMSLYIEEEEDIFSIDNNT
GTIYSTMAFDREQKTTYSFRVKAVDGGDPPRSATATVSLFVMDENDNPPTVTFPMNSSYT
LLPPSSNVRTVVRTVSATDTDTGVNADLSYSIVGGNPFKLFEIDAVTGVVSLVGKLEKKH
FGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLSNSTIVEGQIARSLGTPLNADIAGDPNY
DLGKQRLSIAIGVVSGIMTVILIILVVVLARYCRPKNKNGYEAGKKDHEDFFTPQQHDKG
KKPKKDKNKKKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSNSPGMGRYRSVNGGPGSPD
LARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGNGDNISIGSDHCSEYSSQT
INKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPED
AYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDACWMPVRTSPERRPKA
TPPKLSTFMTSPGSSVADQPGSQETLAVANGDPSHLLGDRNRNLLNKKMASSSSSYDAFS
SAGFSASEETSRPTEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaggactacaggacttgtggactgtttaagctactgctttcttattttgcagctgctg
agtcagcccgcagccaagcaagtgctccggtaccgcctggctgaagagggtcctgccgat
atccgtgtcggtaatgtagccgcggacctcggcataactgccggcatggatgtgactttt
accctcgagtccggctccgaatactttaaaatcgacaacatgaccggtgacctgagcacg
aacgagcgacggatagaccgcgagaagctgccgcagtgtcagatgatttttgatgagaac
gagtgttttatagatttcgaagtgtccgtgatcggacccgcgcaaagctgggtcgatctc
tttgaagggaaagtgattattttagacataaacgacaacacgccgtcctttccctctcct
gttctcactctgtcagtggaggagaacagaccgattggcacactttatctcctgcccacg
gccaccgacagagatttcggtaggaacggaatagagcgatacgagttaattcaggacaac
ggcgatgtcagacgaatcggtacttcaggcacaggcggtgttgacactcactcaggcaag
cggagatttgacgagggcgcgagccgtagcagcgtgtttgaacttcaagttgctgacacc
acagacggcgagaagcagccgcagcttattatcaaaggcgctctggatagagagcagcgc
gactcttatgagctgactttgcgcgttagagacgggggcgaccccccacgctcctcacaa
gccattcttagagtaatgatcacagatgttaatgataacacccctcgttttgagaaaagc
gtgtatgagacagacctgccagaaaacagctccccaggtgcacccattctccagctcaaa
gcgggcgatactgatgttggggtcaatggacagattgaatacgttttcggggcagccaca
gagtcagtgagacgtttgctgcggctggacgagagcactggctggctcagcgttttgcat
cgaatcgaccgtgaagatgtgagccagctccgctttacggtcatggcacgtgaccgtggt
cagccccctaagactgacaaggcgacagtggtcattaacataaaagatgaaaatgacaac
gttcctaacatagacataagaaaaataggacgcatttatcttaaagacggtgtggcgaat
gtggcagaggatgtgattgttgacacccccattgctctggtccaggtctcggaccgagat
aaaggacagaatggtatagtgacgtgcaccgtagtgggcgatgttccctttcagctcaaa
ccagctagtgaggtcgagggtgaaatgaataaaaagaagtactttctccatacgtcagca
cctcttgattatgaagcagtgcaggagtataatgtggtcattgttgccgttgactccggg
agccctagtctctctagcaacaattcactgatagtgaaagtgggggacatgaacgataat
ccaccagtttttagcaaaagcacagttgaagtttcatttcccgagaacaatgcgcctggt
gagcgtgtggtcacagtcgtggccttagatgcagacagcggcaaaaacgcagagatctca
tactccctggactcctctgtgagtggaatattttccattgatgccgacactggtgacatc
cgtgtcaacaccatacttgacagggaacagacggagaggtacgagttcaaagttatcgcc
aaagacaagggcatgcctgttctgcagggctcagccacagtggtcgttctggtggcagat
aaaaatgacaacgaaccaaagttcatgcaggacgtcttcactttctacgtaaaggaaaac
ctgcaacccaacagtcccgttggcatggtaacagtcatggattctgataaaggacaaaat
gcagacatgagtctgtacattgaggaggaagaggatattttctctattgacaacaataca
ggcaccatttactccaccatggcttttgaccgggagcagaaaaccacgtattcgttccgt
gtcaaagctgttgatggaggtgatccgccccggtctgctacggccacggtgtctcttttt
gtgatggatgaaaacgataatcctcccactgttacttttcctatgaatagctcatataca
cttctccccccttctagcaatgtgagaacggtggtcaggactgtctcggcgaccgatact
gacacaggagtcaatgctgatcttagctacagcatagttggcggcaatccatttaagttg
ttcgaaattgatgcggtgactggcgtggtctcattagttggcaaactagaaaagaaacat
tttggcctgcaccgtctggtcgtgcaagtaaatgacagcggagttccatcacaaagcacc
accacactggtgcacatctacgtcaatgaaacgctctccaactcgaccatcgtggagggg
cagatcgcaagaagccttggtacgccgctcaatgccgacatcgctggtgaccccaactat
gacttaggaaagcaacgcctgagcatcgccatcggtgtggtgtcgggcatcatgacagtc
atacttattatccttgtggtagttttggcccgctactgcagacccaagaacaagaacggc
tacgaggcaggaaagaaagaccacgaggactttttcacacctcagcaacatgacaaaggc
aagaaacccaagaaagacaagaataagaaaaagtcaaaacaacctctatacagcagcatt
gtcaccgttgaagcatctaagccgaatggccagcgctacgatggcgttaatgagaaactc
tctaacagtccaggaatgggccgctacaggtcggtcaacggcggccccgggagccctgat
ctggcccggcattacaaatccagctcacctctgcccactgttcagctgcacccacagtca
cccacggcggggaaaaagcatcaagccgttcaggacctgccaccggctaacacatttgtg
ggcaatggagataacatatccatcggatcagatcactgttctgagtacagtagccaaacc
atcaacaagtacaacaaacaaccgttccgccgagtgaccttctcggtggtgagccagccc
caggacccgcaccagggctcgctgcagagctgctacgacagcggtctggaggagtcggag
acgcccagcagcaagagttcgtcaggccccagactaggtgcccttcctctacctgaagac
gcctatgagaggactacgcccgatggcagtgtcggtgaggcagagcatatggaaaatgac
tcgcggcccctgcctgacgtagctatgacgggtaaatgcacccgggagtgtgacgaatac
ggccactcggatgcctgctggatgcccgtgcgcacctcgcctgaacgcagacccaaggcc
acccctcccaaactctccaccttcatgacctcccccgggagcagcgtcgctgaccagccc
ggaagccaggagacgctggccgtcgccaatggcgacccctcgcacctgctgggcgaccgc
aaccgcaatctccttaacaagaagatggcctcctcttcctcatcctacgacgcattcagc
tcggccggattttccgccagcgaggaaacgtctcgcccgacagaggagattccgctggcg
cccacaggcgaatacaagccgacgcaatgcggaactctcaccaggcgagaggtttacctg
taa
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