Triplophysa rosa: 130554656
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Entry
130554656 CDS
T09216
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130554656
04121 Ubiquitin system [BR:
tros04121
]
130554656
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130554656
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130554656
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
130554656
NCBI-ProteinID:
XP_057190431
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Position
LG1:18388356..18394074
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AA seq
639 aa
AA seq
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MPKMDSNTTFERESLLKKSNSRSEIWNFFGFLPDEARKPIDDEKPICRQCLQRFQAKGGN
TSNLIKHLRTHPAAFAEYTKNQNDAALISAQSHTAQPATSRLQPTIDKLFEKAKKYESTS
KEATILNRAVTEFICMDQIPIYTVEKCGFKQLVSKLNSKYELPSRNFFMNKEIPKLYTET
REKVKAELEGSRFYACTTDLWSSRTMQSYMAVSAQFIKKDWQMESWCLGCAELNSDHTAE
SLSEAFTEMLKEQWGLDLHHMAGITTDNASNNKKAFSDYNWIPCFGHNIDLAIHKGLNVD
PVANTLSRLRRTISAFSRSTKLTRQLKSKQADLSLPLHKLIHDEPTRWGSTFDMVDRFLE
QQQAVYAVLTDNRNKWHLMPKESDVTTMEALQSVLGPLRVFTDALSGEQNPTISSVLPLL
WKAESILTVSASDSNLTSSIKGCIRTDLQSRYNQEELLATLRCSTFLDPRFKDTFVFNLQ
QVEAQFLHHMEHMVVHAVPSVEVPNQQPCTKSVISGLLTGIMAEKRGATSHAVGDDVTFS
GANTQLKLRRELDVYQKLPEIDPGDSPLRWWRINEVSFPVLSTFARRYLCISATSCASER
IFSTSGNICSPLRARLTSHHVDMLVFLAKNLMQVKKLDT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaatggattcaaacacgacttttgagcgtgagagtttattaaaaaagagcaat
tcacgtagtgaaatctggaatttctttgggtttttgcctgatgaggccagaaaaccaatc
gacgacgaaaaaccaatctgccgtcagtgtctccagagatttcaggccaaaggtggaaac
accagcaacctcattaaacacctccggactcatcctgctgcttttgcagaatacacaaag
aatcaaaacgatgctgctctaatcagtgcccaaagccatacagctcaaccagctaccagc
aggctgcaacctacaattgacaagctctttgagaaagccaagaagtatgaatcaacgtcc
aaagaagcaactattctaaacagagcagtgaccgagttcatttgtatggaccaaatccca
atatacactgtggaaaagtgtggatttaagcagctagtaagcaaactcaacagcaaatat
gagctgcccagcagaaacttttttatgaacaaggaaataccaaaactgtacacagaaact
agagagaaagtaaaagcagaacttgaaggatctagattttatgcctgcacaacagacttg
tggagcagcagaacaatgcagtcctacatggcagtatctgctcaatttataaaaaaggat
tggcagatggagtcatggtgcctgggctgtgctgaacttaatagtgaccacacagcagaa
agcctgagcgaggcctttactgagatgctgaaagagcagtggggcctggatttacaccac
atggcaggaattactactgataacgcttcaaataacaaaaaggccttctctgattataac
tggattccatgctttgggcataatattgacctggcaattcacaagggcctcaatgttgat
cctgtagcaaataccttgtctcggctcagaagaaccatctctgctttttcaaggtccacc
aagctgacaaggcagttaaagtcgaagcaagctgaccttagtctaccactgcacaaactg
atacatgacgaacctacacgatgggggtcaacattcgatatggtggatcgctttttggaa
cagcagcaagctgtttatgctgttttaactgataaccgaaataaatggcacctcatgcca
aaagaatcagatgttactacaatggaagcactgcaaagtgtacttggacccctaagggtt
ttcactgatgcactaagtggggagcagaatcccacaatatcctcagtcctcccactgctg
tggaaagctgaatcaattttgactgtatctgcctctgacagcaacctaacttccagcatc
aagggttgcataaggactgatttgcaaagcagatacaatcaggaagaactgctagccact
ttgagatgttctacatttttagatccgagatttaaagacacttttgtgtttaatctacag
caggtggaagctcagtttctgcatcacatggaacatatggtggtacatgcagtcccatca
gtggaggtcccaaatcagcagccttgtacaaagtcagtgataagtggacttttgacaggt
atcatggctgagaaaagaggagcaacatcacatgcagttggggatgatgttacattctct
ggagcaaacacacagctaaagttaaggagagaactggatgtataccaaaaacttccagag
atagatccaggagacagcccactcagatggtggagaataaatgaggtcagctttccggtc
ctgtcaacgttcgcaagaagatacctctgtatatctgccacaagttgtgcatcagagcgc
atttttagtacgtcaggcaacatatgttcacctcttcgtgcaaggctgacgtcgcatcat
gtagatatgcttgtgtttcttgccaagaatttaatgcaggtcaagaaattagatacctaa
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