Triplophysa rosa: 130554875
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Entry
130554875 CDS
T09216
Symbol
trpa1a
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130554875 (trpa1a)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130554875 (trpa1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
130554875
NCBI-ProteinID:
XP_057190738
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Position
LG5:6845970..6855539
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AA seq
1101 aa
AA seq
DB search
MTHVNKTSRQSYDSVMDGDDSSQIHTDVFEWAMQGNTDALEKHSRYLDIRDHNGASPLHY
AASKGHFCTIRFIVMITGQQELNGRDEEGNTPLHWAVQRDQPRSCSTLLSLGADPNILNN
SHQSPLHQAVSLGNNFLVEQLVSHKLTDVNLEGDLGNTPLILAACLNNHEALEILFTHGA
KLCRQNKLGHFPIHAAAFSGAKKSMEVILKKGEEVGLSIDTHINYVDKTCCSPLHLAVRG
GNLDVIKLCIAYGAKIDQQQCDRSTALHFACSQGAIEAVKVMLSAYHKVCDLINITDGAS
QTPLHKAALFDHFDLSEYLISQGADIDFVDCKGHSPLLLATSCGAWRTVNLLLSHGADMK
TKDKSGCNFLHLAILQPRGLKNLPTEVLQQESVRELLNDEDLEGCTPLHYACRLGIPECV
KNILGLEVSLNQKCKQKKSALHFAAEYGRINTCHRLVEMMTDTRLLNEGDEKGLTPLHLA
SRGGHVKVVELLLRKGALFHSDYRGWSCLHHAASEGYTQTMDTLLASNIKLLDKTDGDGS
TALHLAARAGHVAAVRLLLYREAKITLNKCDSSFLHEAVHNGMTEVTDAVIESDRCEEAM
TTYKPNSGKRCIVMDMIEFLPESFKHLLDTCIKESEEDVNSCNYFIEYNFRWLQYPLQEL
KKASGERDITYKPLHALNAMVHFNRISLLTHPVCKKYLEMKWNTYGIKAHLLNMTVYALG
VFPLTYLIVNLKPTLSTANNVTTVNMVCTSLYKQSYLITTCMFLILAMNLYAVGKEILQM
SQQRMNYLRDLSNYMDWAAAICALLFVVPLLLNVKSSWHWQAGALAALTSWINLLLYVQR
FERIGIYVVMFREISRTLLSIIVLFFYLILAFALSFYALMIEQQHFGRMFLSLMQTFVMM
VGEINYQDNFLKPFLQGTLPFPNLTLAMFVWFVLLVPILLMNLLIGLAVGDIAEIQTNAC
LKRIAMQIELHTNLEERLPYWFMKRVDQISLKEFPNRCFRGKKRWGFFGNEVKRVRTRLS
PSTPQCTPLKRELTKQKYRLKEMSDVMEKQHNLLKLIVQKMEISSEAEDHDGPPVFQELK
EKLLTRSKWGPLLRAVTARKK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgtcaacaagacttccaggcagtcctatgacagtgttatggatggggatgac
agcagccagatacacacagatgtgtttgagtgggctatgcaaggaaacacagacgccctg
gagaagcactctaggtacctggatatacgcgatcacaacggtgccagcccactgcactat
gctgcatccaagggacatttttgcaccattagatttattgtgatgatcaccggacaacaa
gagctgaatggcagggatgaggaggggaatactcctctgcactgggctgtacagagagat
cagccacggagttgctctactctgctgagtctgggagctgatcctaacatcctcaacaac
agccaccagtcaccgctgcatcaggctgtcagcctaggaaataatttcctggtagagcaa
cttgtctcacataaactaactgatgtgaatctggaaggggacttgggaaacacgcctctt
attttagcggcttgcttgaataatcatgaggctctggagattttgttcacacatggggca
aaattgtgtcgtcagaacaaacttggacattttcctattcatgctgctgcattttctgga
gcgaagaaatccatggaggtaattctgaagaaaggggaagaagtcggtttatctattgac
acccatataaactatgtggataaaacttgctgtagtccacttcacctggctgtacgtgga
ggaaaccttgacgtaattaaactctgcatcgcatacggagcaaaaatcgatcagcagcag
tgcgacaggtccaccgctcttcattttgcatgtagtcagggtgccatcgaggctgttaaa
gtcatgctgtcagcttaccataaagtgtgtgaccttatcaacatcactgacggggccagt
cagacacctctacataaagcggcgctttttgatcattttgatctctccgagtatctcatt
tcacagggtgctgatattgactttgttgactgcaaaggccattcaccgctccttctggca
acaagttgtggagcgtggagaactgttaatctgctcctttctcatggggctgacatgaag
acaaaagacaaatccggatgcaatttcttgcatctcgccattctgcagcccaggggtcta
aaaaacctgcccacagaggtactgcagcaggagagtgtgagagagctgctgaatgatgag
gatttagagggctgcactcctcttcattatgcctgcagactgggaataccagagtgtgtg
aaaaatattctgggattagaagtctcactcaaccaaaagtgcaaacagaagaaatctgcc
cttcattttgctgccgaatatggaaggatcaacacatgccacaggcttgtagagatgatg
acagacacgagactgttgaacgaaggggatgagaagggactaaccccgctgcacctggcc
tctcgcggcggtcacgttaaagtggttgagctgctcctccgcaagggggcgttgtttcac
agtgactacagaggatggtcgtgtctgcatcatgctgcatctgaaggatacactcagacc
atggacacgttactggcatctaacattaagcttctggataaaacggatggagatgggagc
acagctttacatctagctgctcgggcaggtcatgtggcagcagtaagactgctgttatac
agagaagccaagattaccctgaacaagtgcgattcatctttcttacacgaggctgtacac
aacgggatgacggaggtcactgatgctgtgattgagagtgataggtgtgaagaggctatg
acaacgtataaaccaaactcgggaaaacgctgcattgttatggacatgatcgagtttctt
ccagaatcctttaaacatcttctagacacttgcataaaggaatcagaggaagatgtaaac
tcctgtaattactttatcgagtacaatttccggtggcttcagtatccactgcaagagctt
aaaaaagcaagtggggaaagagacatcacctacaagcctcttcatgcactaaatgctatg
gtacattttaatcggattagcttgttgacccatccagtctgcaagaaatatttggaaatg
aaatggaatacttatggcatcaaggcacatcttctgaatatgaccgtgtacgcgctgggg
gtgtttcctttaacatacctcattgtaaacctgaagcccaccctgagcactgccaacaat
gtgacaacagtcaacatggtctgcacatccttatacaagcaatcctatttaatcacaaca
tgcatgttcctgattctcgctatgaatctgtatgcagttgggaaagagatcctgcaaatg
tctcaacagcggatgaattatttgcgagatttgtctaactacatggactgggccgctgcc
atctgtgccctgctgtttgtggtgcccctcctgctgaatgtgaagagctcctggcactgg
caggctggagcactggccgctctgacctcctggatcaatcttctcctctatgtccaacgg
tttgaacgaattggtatatacgtggtaatgtttcgagagatctcccgcacactgctgagc
attattgtgctgttcttttacttgatactggcatttgctttgtccttctacgccttgatg
atcgagcagcaacactttggcaggatgttcctttcactgatgcagacctttgtcatgatg
gtaggagaaatcaactaccaagacaatttcctaaaacctttcctgcagggaacccttccg
ttccccaacttgacactggcgatgtttgtttggtttgtcttactcgtacctattcttctc
atgaaccttctgatcggattggctgttggtgacatagcagagattcagacgaatgcttgc
ctgaagcgtattgcaatgcagatagaacttcacacgaatctggaggaaaggcttccctat
tggtttatgaagagggtggaccagatctcccttaaagaatttccaaacagatgcttcaga
ggaaagaaaaggtgggggttttttgggaatgaagtgaagagggtccggacccgtctcagt
cccagtacccctcagtgcactccgttaaaacgggagctgaccaaacagaaatacaggctg
aaggagatgtcagacgttatggaaaagcaacacaacctactgaagctcatagtgcagaag
atggagatcagctcggaggctgaagatcacgatggtcctccggtctttcaggagctgaag
gagaaacttctcactaggagcaaatgggggccgctgctcagggcagtgactgccagaaag
aaatga
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