Triplophysa rosa: 130555121
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Entry
130555121 CDS
T09216
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130555121 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130555121 (smarcd3a)
03036 Chromosome and associated proteins [BR:
tros03036
]
130555121 (smarcd3a)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130555121 (smarcd3a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130555121 (smarcd3a)
PBAF complex
130555121 (smarcd3a)
GBAF(ncBAF) complex
130555121 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130555121
NCBI-ProteinID:
XP_057191177
LinkDB
All DBs
Position
LG5:5555069..5573123
Genome browser
AA seq
505 aa
AA seq
DB search
MDMEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPVLDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPATNEISARQMDMREAQSDHQVASNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPEAEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHIISVDTNDQKKTACYDIDVEVDDPLKSQMSGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKVMTDTAGNPEEERRAEFYNQSWSQEA
VSRYFYCKIQQRRQELEQTLAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaagactctgccggaggagctcgcaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccagggatgacctcaggggcacgaatgccccatcaagga
gctcccatggggcctcctggacctccgtatggaggaacaccaccgattcggccagggatg
cctaacccggttttggaccccaaccgaaaacggcctgccccgacccagcctgtgcaacct
cctcccgtccagaaccgtcccagaaagaaaccacttggatttccagcaacaaatgagata
tctgccagacagatggacatgagagaagcccagtcagatcatcaagttgcatccaatgcc
aagagaagaaaaatggcagacaagattctccctcaaaggatccgtgaattggtgccagag
tcgcaggcgtacatggacctcctggcatttgaacgcaagcttgatcaaaccatcatgagg
aagagagtggatatacaggaagccctcaaaagaccaatgaagcaaaagcgcaagctacgg
ttgtacatttcaaacacattcaatcctgccaaacctgaagcagaggactcagagggcagc
attgcatcctgggagttgcgtgtagagggcaaattgttggatgatcctgggaaacaaaag
aggaagttttcttcattcttcaagagcctggttattgagctggacaaggatctgtacggc
cctgacaaccacttagtggagtggcaccgcaccccgacaacccaggagacagatggcttt
caggtgaagaggcctggtgatgtgaatgtgcgctgtactctgctgctcatgctggattat
cagcctcctcagtttaaattggacccacgccttgctcgtctcctgggaatccacactcag
acccgctcgtgcatcatccaagcattatggcagtacgtcaagaccaacaagctgcaggac
tctcatgagaaggagtacatcaactgtgataaatacttccagcagatctttgactgtcct
cgactgaagttctctgagattccccagcgactgaccaacctgcttctgccacctgatcct
attgtgatcaatcatattatcagtgtcgatacaaacgaccagaagaagacagcctgctat
gacatcgatgttgaagtcgatgatcctctcaagagtcaaatgagtggattcctgctgtcc
acagccaatcagcaagagattgcatctcttgacaacaagatccatgaaaccattgagtcc
atcaaccagctaaagattcaaagagacttcatgctcagcttctccagggatcctaagggc
tacatccaagactggatctgttcccaaaaccgagaccttaaggtgatgacggatacagct
gggaatccagaggaagagaggagagcagagttttataaccagtcctggtctcaggaagct
gtcagtcgctacttttattgcaagattcaacaacgaagacaagagcttgaacaaactttg
gcgatgcgaaccacttag
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