Triplophysa rosa: 130555445
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Entry
130555445 CDS
T09216
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tros
Triplophysa rosa
Pathway
tros04141
Protein processing in endoplasmic reticulum
tros04210
Apoptosis
tros04217
Necroptosis
tros04218
Cellular senescence
tros04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130555445 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130555445 (capn1)
04217 Necroptosis
130555445 (capn1)
04218 Cellular senescence
130555445 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130555445 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130555445 (capn1)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
130555445 (capn1)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C2: calpain family
130555445 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
130555445
NCBI-ProteinID:
XP_057191649
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Position
LG1:complement(5335776..5366259)
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AA seq
704 aa
AA seq
DB search
MEAMIATGMAAKLRSQWDRDEGLGQNHNAVKFLGQDFESLRGQCLQNRTLFEDSLFPATG
TSLGFKELGPHSSKTHGVRWMRPTEICMRPQFIMDGATRTDICQGALGDCWLLAAIGSLT
LNDNLLHRVVPHGQCFDRGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGGE
FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELIKAPPDLFSIIGRAIERG
SLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGVEEVLYRGNMTKLVRIRNPWGEVEWTG
AWSDDSREWDSVDRSVRGRLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALQASQVKK
WSTSHYHGEWRRGSTAGGCRNFPATFWINPQFKLTLQHPDSPGQSECSFLVALMQKDRRK
KRKEGKDMETIGFAIYEVPREFVGQTGAHLKRDFFLSHASSARSELFINLREVSSRCRLP
AGEYIIVPSTFEPNKDADFVLRVFSEKPANSEEMDDKVTADIPEEQRLDESQIDAAFKNL
FRQLAGADMEINVTELQTILNRIIGKHKDLKTDGFCKEACRSMINLMDTDGSGKLGLTEF
HVLWEKIKRYLSIFREHDLDKSGTMSSYEMRKALDSAGFKLNNHLFQLIIIRYTEEDLTV
DFDNFVTCLVRLETMFKTFKTMDTDGDGIMSLTFFQWISLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatgattgccacaggaatggccgccaaactccggagtcagtgggacagagat
gaaggtttgggtcagaatcacaatgccgtgaagttcctgggacaagattttgagtcacta
aggggtcagtgcctccagaacaggacattgtttgaagactcattgtttccggccactgga
acttctctgggttttaaagagttgggcccacattcctctaagacgcatggtgtgcgatgg
atgagaccgacggagatttgcatgcgtcctcagtttatcatggatggagctactcgtact
gacatctgtcagggagctctgggtgactgttggttgctggcggccatcgggtctctgact
ctgaacgataacctcctgcaccgcgtggtgcctcatggacaatgctttgacagaggctac
gctggaatttttcactttcagttttggcagtttggtgaatgggttgacgtggtgattgat
gaccggttgcctgtgaaggatgggaagctgttgtttgtacactccgcagaaggcggagag
ttctggagcgcactgctggagaaggcctatgccaagctaaacggctgttatgaggctctc
tctggtggaagcacatctgaggggtttgaagattttaccggcggggtcacagagatgtac
gagttgataaaagcgccgcctgatctcttcagcatcattggccgggccatcgagagaggc
tcacttctgggctgttctattgacatcaccagtaagtttgacatggaggcagtgaccttc
aagaagctggtcaaaggtcatgcttactctgtgacaggagtggaggaggtgctctacagg
ggaaacatgactaaactggtgcgtatcagaaacccctggggtgaagtggagtggacagga
gcctggagcgatgactctcgagaatgggacagtgtggacaggtcagttagaggcagatta
cagaaccgcagtgaggatggagagttctggatgtcgttcagtgacttcctgcgggagttc
acccggttggagatttgtaatttgacagcagatgctctgcaggcaagtcaggtgaaaaaa
tggagcacgtcgcactatcacggggagtggaggaggggcagcacggccggcggttgtaga
aacttcccagccacattctggatcaaccctcagttcaagttgaccctacagcatcctgat
tctcccggccaatcagagtgcagcttcctggtggcgctgatgcagaaagatcgcaggaag
aagcgaaaagaaggaaaagacatggagaccatcggatttgccatttacgaggttccgaga
gagtttgtgggtcaaacaggtgcgcacctgaagcgcgattttttccttagtcacgcgtcc
agcgcccgctcggaactcttcatcaacctgagggaggtgagctctcgttgccgactgccg
gcgggcgagtacatcatcgtcccatccacctttgagcccaacaaagatgccgactttgtc
ctccgagtattctcagagaaacccgccaactccgaagaaatggatgataaagtcacagct
gacattcccgaagagcaacgtctggatgagagtcaaattgatgctgcctttaagaatctc
ttcagacagttggctggagcggacatggaaatcaatgttacagagctgcaaaccatactg
aacagaattatcggcaaacataaagatttgaagacagacggcttttgtaaggaggcctgc
cgtagcatgatcaacctcatggatacagatggcagcgggaaactcggactcacggagttc
catgtgttgtgggaaaagattaaacgttacctgtcaatcttcagggagcatgatcttgat
aaatctggaactatgagctcttatgagatgcgaaaagctctggactcagcaggatttaag
ctcaacaatcatctattccagctgattattattcgctacacagaagaagaccttactgtg
gatttcgacaactttgtcacctgtttagtgcgattggagaccatgttcaagaccttcaag
actatggacacagacggtgatggaatcatgtcactcacattctttcagtggatctctttg
accatgtttgcctga
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