Triplophysa rosa: 130555462
Help
Entry
130555462 CDS
T09216
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
tros
Triplophysa rosa
Pathway
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130555462 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130555462 (pou2f1b)
03021 Transcription machinery [BR:
tros03021
]
130555462 (pou2f1b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130555462 (pou2f1b)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
130555462 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130555462
NCBI-ProteinID:
XP_057191681
LinkDB
All DBs
Position
LG6:complement(8422607..8442387)
Genome browser
AA seq
691 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESGDENTGAQTNGLDFQRQTVQTTSAITNA
HAQALLQQLTLTPAQQQLLLQQAQAQLFAAAVQHSAGQQSSTTGASISASAATPITHIPL
SQPIQITPQLQQLQQQQNLNLQQFVLVQPGHHIATQLQPAQFIISQTPHGQQSLLQAQNL
LTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHTQMTPKHIDTPTLEEPSDL
EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLNDAENQTSDQGLSSPSSLGSPGLGLEGLNRRRKKRTSIETNIRVALEKSFLEQNQ
KPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAASTPIKAIFPPTTLASL
VTSNVPTTMTVNPILPLTSTVSSVSFTGTTIGSATTNTASVISTAPVITTAASSPSLSPS
PTTPQTTSVEQVSPQEIVTAVSQAPSSLASTFGTGQVMVASSLSAALQGAAQLPTSASLA
AMAAAAGLNPGLMASSQFAPGGALLSLAPGGLGSGLSPALLSNSTLATIQGVWSALASSG
TLPITSLDGSGNLLFANTCAGSTPNLVTTPLFLNPQNLSLLASNPVSLVSAGGASGASGA
LNLHISADAHQNAVTTATMPASTIITASKAQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcggaaacgagtaaatgtgcaatggagagcggggacgaaaacactggtgcccaa
acaaatggtctggactttcagagacagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccctgctccaacagttgactttgactccagcgcagcagcagttattgctg
cagcaggcccaggctcagctgtttgcagcagccgtgcagcattcggccggccagcagagc
agcactacaggagccagcatctccgcctccgcagccacgcccatcacccacatccccctc
tcccaacccatccagatcacacctcagttacagcagctgcaacagcagcagaacctcaac
ctgcagcagttcgtgctggtccagccgggccaccacatcgcaacccagctgcagcctgcg
caatttatcatctctcagacgccacatggtcagcagagtctcctgcaagcccagaacctt
cttactcaactacctcaaagccaagccaacctcctgcagacccagccaagcatcacactt
gccacacagcctgccacgcccacgcgcacgatagcagctacccccatccaatccctccct
cacacccagatgacaccaaagcacattgacacgcccactctggaggagccgagcgacttg
gaggagctagagcagtttgccaagaccttcaaacagagacgtatcaaactgggcttcacg
cagggggatgttggccttgccatgggaaaactttacgggaatgacttcagccaaaccacc
atttctcgatttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcccctg
cttgagaaatggctcaatgatgcagagaatcagacgtctgatcagggcctgtccagtccc
agctctcttggctcgcctgggttgggcttggagggcctgaaccgtcgccgcaagaagagg
accagcatcgagaccaacatcagagtggccttagaaaagagctttctggagcagaaccaa
aaacctacctctgaggagatcaccatgatcgcggaccagctcaatatggaaaaagaggtg
atccgagtatggttctgtaaccgcaggcagaaagagaagaggatcaacccacccagcagt
ggcagtgccgccagcacccccatcaaagcgatcttcccacctaccactctggccagtctt
gtgaccagtaatgtgccgactacaatgactgtaaacccaattttgcctctcaccagcact
gtctccagcgtcagtttcactggtacgactattggctcggccaccactaacactgcatcc
gtcatctccactgcacctgtgatcactaccgcagcatcctctccctcgctcagcccttct
cccaccacgccacagacgacctcagtggagcaggtgtcgcctcaggagattgtgactgcg
gttagtcaggcaccatcctccctggcgtccactttcggcaccggacaggtgatggtggcc
tccagcctctctgcggctctgcaaggtgccgcccagctacccaccagcgccagccttgct
gccatggctgctgccgctggcctcaatcctgggctcatggcatcctcgcaattcgctcct
ggtggggctcttctaagtttggcacctggtggtctcgggagcggtctgagtccagcacta
ttgagcaacagcaccttggccacaatccaaggtgtgtggagcgctctggcgtctagtggc
actctgcctattacatctctggatgggagtgggaatctgctgtttgcgaacacctgcgca
ggcagtaccccaaatcttgtgacgacgcccctatttctgaaccctcagaacctgtcactg
ctcgccagtaacccggtcagcctggtgtctgcaggtggggcatcaggtgcctctggggcc
ctcaacctgcacataagcgctgatgcccaccagaatgcagttaccacggcaactatgccc
gcctccaccatcatcacagcctcaaaggcccagtga
DBGET
integrated database retrieval system
