Triplophysa rosa: 130555635
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Entry
130555635 CDS
T09216
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
tros
Triplophysa rosa
Pathway
tros04060
Cytokine-cytokine receptor interaction
tros04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130555635 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130555635 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tros04052
]
130555635 (tnfsf13b)
04090 CD molecules [BR:
tros04090
]
130555635 (tnfsf13b)
Cytokines and neuropeptides [BR:
tros04052
]
Cytokines
Tumor necrosis fators
130555635 (tnfsf13b)
CD molecules [BR:
tros04090
]
Proteins
130555635 (tnfsf13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
130555635
NCBI-ProteinID:
XP_057192000
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Position
LG6:23543825..23548766
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AA seq
273 aa
AA seq
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MPVGDAGPGRGNGGRLPWVFVVLILAVVTSSSLSVLSLYHVLALQAEVEGLRAEVVRKRE
EQSGKLEDPVEEAEKQAQQQKQEENKDKIECLQQTEMEETGPEDHNGMAKRSRGQVSDKT
AFQPCLQMMADNRRKTFQKEFALEICTAVPWQTGLKRGSALEEERGTILVKAEGFFFVYS
QLSFSQVYYIDSTFAMGHIVIRIKKNVVGDESQQVVLFRCIQSMNPVNHFNTCYTAGVVK
LDSGDKLELLIPRTQANISLDGDSTFFGAIKLA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttggagatgccggaccaggccggggcaatggcggaaggttgccctgggtgttt
gtggtcctgattcttgctgtcgtcacctcttcttcgctctctgttctttccctgtatcat
gttcttgccctgcaggccgaggtggagggtctgagggccgaggtggtccgcaagagagag
gaacaaagcgggaaactagaagatcctgtggaggaggcagagaaacaagcccagcagcag
aaacaagaggagaataaagacaaaattgagtgtctgcagcaaaccgagatggaggagacc
ggacccgaagaccacaacggcatggcgaaaagaagtcgtggtcaagtctcggacaaaaca
gcctttcagccctgcttacagatgatggcagacaacaggaggaaaaccttccaaaaggag
tttgcattagaaatatgcacagcggttccgtggcagacgggcctaaagcgaggctctgct
ctggaggaagaacgaggcaccattttagtcaaagcggaaggattcttcttcgtctatagt
cagctctccttctcccaggtgtactacatagactcaacgttcgccatgggccacattgtg
attcgtataaagaagaatgttgttggtgatgagagtcagcaagtggtcctgtttcgttgt
attcagagcatgaatccggtcaatcacttcaacacctgctacactgcaggtgtagtgaag
ctggactctggggacaaactggagcttcttatacctcgtacccaagcaaatatttctctg
gatggggattccaccttctttggagcgatcaaacttgcctga
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