Triplophysa rosa: 130555825
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Entry
130555825 CDS
T09216
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
tros
Triplophysa rosa
Pathway
tros04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130555825 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130555825 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130555825 (si:ch211-269e2.1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
WipA_N
Motif
Other DBs
NCBI-GeneID:
130555825
NCBI-ProteinID:
XP_057192296
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Position
LG6:complement(8369808..8390151)
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AA seq
1175 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDASSCASVHHVSSERNENRQKTVRGKRKARECSENAKRKRS
KGSNGSLGRAENDQLKNGDVEAVTLFEVVSMGRSAMQAVVDDWIDAYTIDRDTALLDLIS
FFIQCCGCRGMVTAEMFHSKQGTDVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDID
SGEYPLIMSGLYWKRFRSHFCEFVSVLVAQCQKCVIFDGYLLNMLISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALSLSVGVDNSQRLYEVEMAKTQSKRASPRLDRIQRKITELQ
DRKFEIENMTDAIFKGVFLKRYRDVIPEIRAICMEELTVWMKQYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQALYQDQISPKMDLFTIRFKERMISMTLDKDHEVAIQAVRLLMA
ISQSCEDVLGPDDYKNVFQFVYCSHRPLATAAGEFLYNRLLSNPELPRSRDEQDRHRELI
LARIQVLIRFHTESQLHQHVLYLVDSLWDSAGVLLKDWTGLTSLLLPHTSCQEQDLSSDE
ETFVIELLLASLRQAAEGPSLSGRGTGKKVISAKEKKVQTDDCSKLTEHFIKVLPELLSK
YSEDAEKLISFLRIPQYFQMDTCDQENSQFVQALLAELEAVVDRHTDTGLLETAARSYQS
ICAQDSPWYSLTRSTFDQLVQRWTQTLETWLEESLSDGCFTANEDNTVEILSTLKKLTAF
NNAQDLSKWSLSELGRRLLEAEIKHGGLPIEITIEALRCMCSCILWKLNTSGEGLTSRES
ALHQRNQLRVFCEKCHRCLSHAQQLIREQAFMCLSDVLIAHNYQLQMWDSSAGSPVLYTP
DPKLQKALLSFILEHVFTSPELDTHSSKGSLLYSFGESECGEGRLEDLHKRRNLLAAYCK
LIVHGVLEMSMAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKIESARTLVLCLQQLYLRL
KQEQDRGNTCSSKVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFKGFIQQ
SEKHSPPHISYLTILSEFSSKLLKPDKKTVYSYLQKFAGEQVINNREESWMPLIYYRASL
MGTAEGEDAVSFISSDTNKQASLTNHSRSPSIKQVNLEGDQRFLSPSIESKGNKLVKSSE
EAKVSQTPLTSSLIVDEGPRGSEEVDDDDTVDIDV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaccaactttactgtccagatccgttcaaaaagagaactcagtggtcgat
gcctcttcctgtgcatcggttcatcacgtctcaagtgagaggaatgaaaacagacagaag
actgtgagaggaaagaggaaagcccgggaatgctctgaaaatgctaaacgtaaacgttcg
aagggcagtaatggcagtctgggaagagcagagaacgaccagctcaaaaatggagatgtg
gaagccgtcaccttgtttgaggtggtcagcatgggccggagtgccatgcaggctgtggtg
gacgactggattgatgcatatactatagacagagacacagcactgctggatctcatcagc
ttctttatccagtgctgtggatgtagagggatggtaacagcagagatgtttcacagcaaa
cagggtactgacgtcatgagtaaaatggtggaagatctggatgaggacacaggtttacaa
tataagaagtttcttgcatttccatggattttaactgtcacgtggcctcttgacattgac
agtggcgagtatccgctcatcatgtccggcctgtactggaaaaggttccggtcacacttc
tgtgaattcgtatcggtgcttgtggcgcagtgtcagaaatgcgtcatctttgacggctac
ctcctgaacatgctcatctcactcctgacagagctctccgactctagagttcgtgctttt
agacacacctgtacactggcagcagttaaactactcagcgctctggtgaatgtggctctc
agccttagtgttggtgttgataacagtcagcggctgtatgaggttgaaatggccaaaacg
cagagcaaaagggcttctccgaggttggacaggatacagcgaaagattactgagttacag
gacaggaaattcgaaatagagaacatgacggatgccatttttaaaggtgttttcctgaag
agatacagagacgtgattcctgagatcagggccatctgtatggaggaactgacagtgtgg
atgaagcagtacagttctgtgtttttgaatgacagctatctgaagtacgtgggatggatg
atgcatgacaagcaacctgacgtgcgtctgaaatgtgtgctgggtctgcaggcactttat
caggatcaaattagtcctaaaatggacctcttcactatacggtttaaggagcgaatgatc
tcaatgacgctggataaagatcatgaagtggcgatacaggccgtgagattgctgatggcc
atctcccaatcctgcgaggatgttttgggtcctgatgactacaagaacgtcttccagttt
gtgtactgctcccacagacctctagctaccgctgctggtgaattcctctacaacaggctg
ctcagtaaccctgaattaccaaggtccagggacgaacaggacaggcacagagagcttatc
ttagcaagaatccaagtccttatccgcttccacactgagagtcagctgcatcagcacgtg
ctgtatctcgtggacagtctgtgggacagtgcaggagttctgctgaaggactggactggt
cttacctcactgctcctacctcacacttcatgtcaggaacaagatttgagcagtgatgag
gagacgtttgtgattgagctcttgctggcatcattgagacaggctgcagagggtccttca
ttatcagggagaggaacaggtaaaaaggtgataagtgctaaagagaaaaaggttcaaact
gatgactgctcaaaactcactgaacattttattaaagtgctacctgagcttttatccaag
tactccgaggatgctgaaaaactgatctccttcctaagaatacctcagtatttccagatg
gacacctgtgatcaagaaaactcacagtttgtgcaggcattgctggctgagctggaggct
gtggtggacagacacacagacacagggctgctggagacagctgctcgctcttaccagagc
atctgtgctcaggattccccctggtactctctgacccggtccaccttcgaccagcttgtt
cagcgctggacccaaacactggaaacatggttagaagaatcattaagtgatggttgtttc
actgcaaatgaggacaacactgtggaaattctgtccacactgaagaaacttactgcattc
aacaatgctcaggacctgtctaaatggagcctgtctgagctgggcagaagacttttagag
gcagagataaaacatggtggtctacccatagagataacaattgaggctctgcgctgtatg
tgtagctgcatcctctggaagctcaacacctccggagaaggtctgacctccagggagtct
gccctccaccagagaaaccagctgcgtgtcttctgtgagaaatgccaccgctgtttgtcg
cacgcccagcagctcataagagagcaagccttcatgtgtctgagtgatgttctcatagct
cataactaccagcttcagatgtgggattcttcagccggctctccggtactgtacacccct
gatccaaaactccagaaagctttgctgtctttcatcctggaacacgtcttcaccagccct
gagcttgacacccatagcagtaaaggttctctcctctattcattcggtgagagcgagtgt
ggagagggtcggctggaagacttgcacaagcggagaaatcttctggctgcgtactgcaag
ctgatagtgcacggagtgcttgagatgagcatggctgctgaggttttcaagcagtatgtg
aagtattacaatgacttcggcgacatcatcaaagagaccctgaacaggacaaggcagatg
gacaagatagaaagtgcgcgcacgctggtgctttgccttcagcagctgtacctgaggttg
aaacaggagcaggacagagggaacacgtgcagctccaaggttcagacctacagcagcata
aaagagctggccagacgcttctcgctcaccttcggctgggaccagatcaaatcccgcgag
tctctggccatgatccacagggatggcattgagttcgttttcaaaggattcattcagcag
tctgagaaacactcaccaccacacatttcttacctcaccatcctcagcgagttctcgagc
aagctcctcaaacctgacaagaagactgtctacagttatttgcagaagtttgcaggtgag
caggttatcaataaccgagaggagagctggatgcctcttatttactacagagcatctctg
atgggcacggccgagggagaagatgctgtctccttcatcagctctgacaccaacaaacag
gcctccctcaccaatcactcaaggtcaccctctataaaacaagtcaatcttgaaggagat
caacggttcctttcaccatctattgaatcaaaaggaaacaagcttgtgaaaagttctgaa
gaagcaaaggtctcacaaaccccactgaccagcagtcttatagttgatgaaggtccacgg
ggcagtgaggaggtggatgatgatgataccgtagatatagatgtttaa
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integrated database retrieval system
