Triplophysa rosa: 130555837
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Entry
130555837 CDS
T09216
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130555837 (hoxd3a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130555837 (hoxd3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
NUDE_C
BASP1
Motif
Other DBs
NCBI-GeneID:
130555837
NCBI-ProteinID:
XP_057192325
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Position
LG6:26802942..26804374
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AA seq
404 aa
AA seq
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MQKTTYYDNAGLFGGYSYPKSDSYTYGPAHQGYSSSSIENDFQNPICPIQTTSARPPAHK
NGDINGSCMRPSASHSNSQPENIIEQQQQQQQQQQQAAPLAASSPSPNTSSTQKKKSPSS
TGSSTATPVITKQIFPWMKETRQNAKQKGTNCPAAGETCDDKSPPGPASKRVRTAYTSAQ
LVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGIMHSPLGH
SPDRSPSLSGSNHIGYSGQLPNVNGLSYNAPSPPPFAKPQQNMYGLAAYTAPLGGCIPQQ
KRYPGTEYDHHSMQGNGSFASANLQGSPVYVGGNFVDSMPGSGPMFNLGHLPHPSSASVD
YSCAAQIPGNHHHGPCDPHPTYTDLSSHHASQGRLQDAPKLTHL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaccacttattatgacaatgctggactctttggaggatattcctaccccaaa
tctgactcctacacatacggtcctgcacaccagggctactcgtcctccagcatagagaat
gactttcaaaatccaatctgtccaattcaaaccacatcagcccgtccgccagcacacaaa
aatggagacatcaatggcagttgtatgcgacccagtgccagccacagcaacagccaacca
gagaatatcatagagcagcagcagcaacaacaacaacaacagcagcaggctgccccttta
gcggccagctcgcccagcccgaacaccagctccactcaaaaaaagaaatctcccagtagc
actggctccagcactgccactccagtcatcaccaaacaaatcttcccatggatgaaagag
acccgtcaaaacgccaagcagaaaggcaccaactgcccagctgcaggagaaacctgcgat
gacaagagtccacctggtcctgcctcgaaacgggtgcgcactgcctacacgagcgcgcaa
ctcgtggagctggagaaggagtttcatttcaatcgctacctgtgtcgccccagaagagtg
gagatggctaatctactcaatctgactgagcgccaaataaagatctggtttcaaaacagg
aggatgaagtacaaaaaagatcaaaaatctaaaggcataatgcactctcccctaggacac
tctccggacagaagcccgtcgttaagtggctcgaatcacattggatattctggtcagctt
ccaaatgtaaacggcctgagctacaacgcgccatctcccccgccattcgccaaaccgcag
cagaacatgtacggcttggcagcctacacggcgccattaggcggctgcataccgcaacaa
aaaaggtacccgggcacagaatacgaccaccacagcatgcaagggaacggtagctttgcc
agtgccaatttacaaggtagtcccgtgtacgtcggggggaacttcgttgattcaatgcca
ggctcgggccctatgttcaacctcggccatcttccccatccctcatccgccagtgtggac
tacagctgtgccgctcagattccgggcaaccaccaccacggaccgtgtgacccccatccc
acatacacagacctcagctctcaccacgcgtctcagggaaggctgcaggatgcgccaaaa
cttacgcatctgtaa
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