Triplophysa rosa: 130555857
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Entry
130555857 CDS
T09216
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130555857 (pms1)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130555857 (pms1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HMG_WDHD1
HATPase_c
PCF11_RFEG_rpt
OAS1_C
Motif
Other DBs
NCBI-GeneID:
130555857
NCBI-ProteinID:
XP_057192360
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Position
LG6:5613791..5639870
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AA seq
942 aa
AA seq
DB search
MKALPAETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSG
IKATDVPVMAVKHYTSKISCHEDLEHLETYGFRGEALASICAISEVIVTTKTADDDFSIQ
HTVDHNGQVVSQKPSHLGEGTTVCASNLFKNLPVRRQYYSNTKKCKEELKRVQNLLMAYA
VVKPELRITLSHNKAVVWQKSRVSDHRAALMAVLGAACVANLLPVQHHQEQPEIDIDGFL
PKPGSDINSTSSSSPDKTFIFVNSRPVHHKDMLKLVKQYYTNSHSNNDSVSRRYPHLMIN
ITIPASTVDINLTPDKTQVMLQNKEEVMLAVEMMLISLYGSYSIGDDKLKTGKNSSKRVQ
NPDRVCTDEEQPTTDISLMGPPEQHTTDISLMGPPEQPTTDISLMGPPEQPTTDISLMDP
PKHLEHSYTNTSIHEVSLNTTANTSSSSSSDDWIINRRSSDFDSINSSSVDDVAMNSTAD
LNCNSPKASKSDSGPNGQNDLSAESWSMGKSFSNQITGEDLEPVKLHLPKADQDCRDPTT
TKKTSPSKTSSYTIMEKMAKLTAFDLISNCSVRQPLSAFSLFEQDTRSQVLEENPKASLQ
DVTTAVKERWECLGEEDRKKYESKAEKSLNYYNLQRKRATEGGGQCAEGKKQMNASSSLN
KAQGVKRKAPLANQQALDKLFSAQPPSKRSPAKLSKPLPFSIETLKRSLNLLCNQKISST
QGLRLVNRLASHGAWVVLCGRKLMLLNPFRVEEALLFKRLLKNNILPTAQMQTPVQLTDG
VLGGQEYMDILMNMEKGSPCRNGDICFTDPRLVANGFQIKLIPGSSSTERCLEVTGMADC
MPFYGIGDLREILQAVKGRDAKTVEHCRPLKVSNYLEGESVRLVRQFPLNLSRADVKNTL
CRMKEELNTESQVCLHGRPFYHDLLTVPETEEDALKIMSNSH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacttccagcagagactgtgcgtttgttgtgcagctcacaggttataacatct
gtcctgaatgttgtcaaggaacttattgaaaattcacttgatgctggttcctcaagcctc
gaagtcaaactggagaattatggattagatcgcattgaggtcagggacaatggttctggt
atcaaagctacagatgttcctgtgatggctgtaaaacattacacatctaaaatctcatgt
catgaagacctggaacacttggagacatatggcttcagaggagaagcgctggcatccata
tgtgccatttcagaggttatcgtcactaccaaaacagcagacgatgactttagcattcaa
catacagttgatcacaacggtcaagttgtctctcagaaaccatcccatcttggcgagggc
accacagtgtgtgcttcaaatctgttcaagaaccttcccgtcagacggcaatattattcc
aacactaagaaatgcaaagaggaactgaagagggtccagaacttactcatggcctacgct
gttgttaagcctgaattaaggatcaccttgagtcataataaggctgtggtctggcagaaa
tccagggtgtcggatcaccgagctgccctcatggctgtgctcggagcggcctgcgtagcc
aacttgctccccgtccaacatcaccaggagcaaccagagattgacattgatggcttcctt
cccaaaccgggctcagatattaattctacaagctcttcaagccccgataaaacatttatc
tttgtaaatagtcgaccagtgcatcacaaagatatgcttaagcttgtcaagcagtactac
accaacagtcactccaataatgactctgtaagccggcggtatccccatttgatgataaac
atcaccattcctgcatcgactgtggacatcaacctgacaccagacaaaacccaagtgatg
ctacagaataaggaagaagtgatgttggccgtggagatgatgttgatctccttgtatggg
tcttactccattggcgatgacaaactcaaaacggggaaaaacagctctaagcgtgtgcaa
aatccagacagggtttgtaccgatgaggaacagcccaccacagatattagtttgatgggc
ccacctgaacagcacaccacagatattagtttgatgggcccacctgaacagcccaccaca
gatattagtttgatgggcccacctgaacagcccactacagatattagcttgatggaccca
ccaaaacatcttgaacattcttacacaaatacaagtatacatgaggtatctttgaacact
accgcaaacaccagctcttcttcatcttctgatgattggataatcaacagaagatcaagt
gattttgacagtatcaattcctcatctgttgatgacgttgcaatgaactctacagcggat
cttaactgtaactctccaaaggcctcaaagagcgacagtggccctaatggacagaatgac
ctatctgctgagagttggagcatgggcaagtccttctcaaatcaaatcacaggagaggac
ctagaacctgtgaaactccatctcccgaaagccgaccaagactgcagagatcctacgacg
actaagaagaccagtccgtccaagacgtcatcttacacgatcatggagaagatggccaag
ctgacagccttcgacctgatcagcaactgctccgtgcgtcagcctctgtctgccttttcg
ctgtttgagcaagacaccagatcgcaagtcctcgaggagaacccgaaggccagtcttcag
gatgtcacaactgctgtaaaagagcgatgggaatgcctgggggaggaagaccgaaagaag
tatgaaagcaaggcggaaaaatctctgaactactacaaccttcaaaggaagagggcaacg
gagggaggtggccagtgtgcagagggcaagaagcagatgaacgccagctcttcgttgaac
aaagctcaaggcgtgaagcgcaaggcccccctcgccaaccagcaggccctggacaaactc
ttctccgctcagcccccgagcaagaggagccctgccaagctctccaaacccctcccgttc
agtattgaaaccctcaagcggagtcttaacctcctctgcaaccagaagatctcgagtacg
cagggcctcaggcttgtaaaccgcttggcttctcacggtgcctgggtcgttttatgcggc
agaaagctcatgttgttgaacccgtttcgagtggaggaggccttgctgtttaaaagactt
ctgaagaataatatacttccaacagcgcaaatgcagacccctgtacagctgacagatggg
gtacttggtgggcaggagtacatggatattctcatgaatatggagaaaggcagtccctgt
cgtaacggagacatctgctttactgatcctaggcttgtagcaaatggttttcaaatcaag
ctaattccaggttcctcgtctactgagagatgtcttgaagtgacgggcatggctgactgc
atgcctttctacgggataggagacctgagggagattctgcaggctgttaaaggccgggat
gcaaaaactgtggagcactgcagacctcttaaagtgtcaaactacctagagggtgagtcg
gtaagactagtcagacagtttcctctgaatctctccagagctgacgttaaaaacacacta
tgccgaatgaaagaggaacttaacacggagagtcaggtctgccttcacggacgaccattt
tatcatgatcttctcactgttcctgaaacagaggaggacgctctcaagatcatgtctaat
tctcattaa
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