Triplophysa rosa: 130555885
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Entry
130555885 CDS
T09216
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
tros
Triplophysa rosa
Pathway
tros04137
Mitophagy - animal
tros04144
Endocytosis
tros04145
Phagosome
tros04148
Efferocytosis
tros05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130555885 (rab5b)
04145 Phagosome
130555885 (rab5b)
04137 Mitophagy - animal
130555885 (rab5b)
04148 Efferocytosis
130555885 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130555885 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130555885 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130555885 (rab5b)
04031 GTP-binding proteins [BR:
tros04031
]
130555885 (rab5b)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
130555885 (rab5b)
Endosome - Lysosome transport
130555885 (rab5b)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130555885 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
130555885 (rab5b)
Exosomal proteins of colorectal cancer cells
130555885 (rab5b)
Exosomal proteins of melanoma cells
130555885 (rab5b)
GTP-binding proteins [BR:
tros04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
130555885 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
130555885
NCBI-ProteinID:
XP_057192407
LinkDB
All DBs
Position
LG6:complement(11936919..11942419)
Genome browser
AA seq
214 aa
AA seq
DB search
MSTRGTGRANGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDTQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgcgggaccggcagggccaatgggaacttaccgcagactaagatatgccag
ttcaaactggtgctgctgggagacatggccgtcggcaaatccagcctagtgctgcgtttt
gtcaagggccaatttgatgagtttcaggagaccactataggagctgcattcctggcacag
tctgtttgtctagacgacactacagtgaagtttgagatttgggacacagcaggacaggag
cgctatcacagcttggcccccatgtactaccgcggagcccaagcggccattgtagtattt
gacatcaccaagcctgaaacatttgagagagctaaggcttgggttaaagagctgcagagg
caagccagtcccaacatcgtcattgctctcgcaggaaacaaggctgatttagcagaaaag
agactggtggagtatgaggaagcccagacatacgctgaagacacaggcttgcttttcatg
gagacctctgccaagactgcaatgaatgtaaatgagttgttcctggccatcgcaaaaaag
atgccaaaaacagacacccaaaaccccacgcatgctgctcgacacaggggagtcaacctg
caggacccagacacacagtccactcgaagctgctgtgggaactaa
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