Triplophysa rosa: 130555907
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Entry
130555907 CDS
T09216
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
tros
Triplophysa rosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
130555907
NCBI-ProteinID:
XP_057192435
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Position
LG6:complement(10700656..10708019)
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AA seq
732 aa
AA seq
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MAMAAFLVAVVQMALLPSAFGGAYYGHKPHPQQHQPIPQMHPQQHQPIPQMYPQQHKPMP
QMHHMGMGKDIPHKAYPHYPPVHLNKGKDNKGETIPRGEQGVPGEVGPQGPPGPPGPHGS
PGPQGNGMAGTPGKQGPPGLPGLPGLGKPGMPGMSGKPGGIGQPGQQGEQGPRGEDGQPG
LAGPPGPPGPPGLPGIGKPGGQGLPGQPGFKGEPGHKGLPGFPGLPGHKGERGIGLPGPQ
GPKGPAGQPGPPGHAGLPGVGRPGLPGVSGPPGLTGKPGQSGEPGPAGQPGEKGPQGLQG
IPGIGKPGEIGLPGQTGPAGHKGLTGPPGLPGKPGLPGFGKPGYPGPKGDKGMGGLPGAP
GPKGDRGNDGQQGMTGPPGKAGPPCAPGPIGPSGEPGTPGEKGDGGSEGAKGDQGPMGQQ
GPPGFPGQPGPQGEDGEPGLRGLPGPFGPKGEGGINGQPGVPGPSGLPGLKGEQGQLGPG
GPQGPKGIPGLTGPGGPIGAPGPTGPKGDFGPPGQAGPPGIGNTGAPGLSGPQGPPGPSG
PPGQPGSAGPPGPPGPPGPALSPDLMGVLPEMGPALDGIKTGGYKKGKYASGGDMMGASG
LEMPAFTAQLTTPFPPVGTPIVLDKLLYNGRQNYNPQTGVFTCDLPGIYYFAYHVHCKGA
NVWVGLYRNGEPVMYTYDEYTKGFLDQASGSAVIPLQPGDTVYLQLPSEQAAGFYAGQYV
HSSFSGFLLYPM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctgctttccttgtagctgtggtgcaaatggctttattgccatcagctttc
ggaggagcatattacgggcacaaaccacatcctcagcaacatcaacctatcccacaaatg
catcctcagcaacaccaacctatcccacaaatgtatcctcagcaacacaaacctatgcca
cagatgcatcacatgggaatgggaaaggatataccacacaaggcttatccacactatcca
cctgtgcacctaaacaaaggaaaggataacaaaggtgagaccattcccagaggtgagcag
ggtgttccaggagaggttggacctcagggaccccctggcccacctgggccacatggatct
cctgggcctcaaggtaatggcatggcaggcacccctggaaagcaaggacctccaggtctt
ccggggcttcctggacttggcaagccaggaatgccaggtatgtcaggaaagccaggaggt
attgggcagcctggacaacaaggtgaacaaggtcccagaggtgaagatggacaaccaggt
ttggccgggccccctggtcctcctggacccccaggcttaccaggaataggaaagcctggt
ggacaaggattgccaggacagccaggatttaaaggagagccaggacataaaggcttacca
ggtttcccagggttacctggacataaaggagagagaggaattggactaccgggtccacag
gggcccaaagggccagctgggcaaccagggcccccaggtcatgcaggattaccaggagtg
ggtaggcctggtttgcctggtgtttcaggtccacctggtttgacaggaaaaccaggtcag
tcgggggagccaggtccagcaggtcaacctggtgaaaagggtccacaaggactacaagga
atccctggtattggaaagccaggagaaattggattaccaggtcagacaggtccagctggt
cacaaaggattaacaggaccaccaggattacctgggaaacccggattacctggatttggt
aaacctggataccctggcccaaagggtgacaaaggaatgggaggactaccaggtgcacca
ggacccaaaggagacagaggtaatgatggtcaacaaggcatgactggtccaccaggtaaa
gctggtcccccatgtgctccaggacccatagggccttcaggtgaacctggtaccccaggt
gaaaaaggagatggaggttcagagggagccaagggagatcaaggacctatggggcaacaa
ggtcctccaggatttcctggccaacctggcccccaaggtgaggatggagaacctggtcta
agagggctcccaggaccctttggtcccaaaggagaggggggtatcaatggtcaacctggt
gttccaggtccatctggactacctggtctgaagggagaacaaggtcagcttggtccagga
ggaccacaaggtcctaaaggcattccaggacttacagggccaggaggaccaattggagct
ccaggacctactgggccaaagggagattttggtccaccgggtcaagctggtccacctggt
ataggcaacactggtgctcctggtctttctggtcctcaaggtccacctggcccaagtggt
cccccaggtcagccaggaagtgcaggtccaccagggccacctggacctccaggccccgct
ctttcccctgacctgatgggtgttcttcctgagatgggcccagcccttgatggtataaag
actggtgggtacaagaaagggaagtatgcaagtggaggtgatatgatgggagctagtggt
ttggagatgcctgctttcactgcccagctgaccacaccattccctccagtaggcacacca
atagtgcttgacaaactactgtataatggacgtcaaaattacaatcctcaaaccggtgtg
ttcacttgtgacctcccaggcatctactactttgcctatcatgtacactgcaagggtgcc
aatgtctgggtgggtctctacaggaatggagagccagtcatgtatacatatgatgagtac
acaaaaggattccttgatcaagcatctgggagtgctgtgattccattacaaccaggagac
acagtttacttacagttaccatctgagcaggcagctggattttatgcaggacaatatgtc
cattcctccttctctggctttttactatatccgatgtag
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