Triplophysa rosa: 130555978
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Entry
130555978 CDS
T09216
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130555978 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130555978 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130555978 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
130555978
NCBI-ProteinID:
XP_057192561
LinkDB
All DBs
Position
LG1:complement(37676746..37707194)
Genome browser
AA seq
1614 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSRETESAISQYQQNSSSYSSRSSKSTQGIRAATYTALDEG
GISPLPKRAKPTYLAMDKENQIIGYVVPIFRGSREFESGLSDTEEARAKESAGYLARRDL
FTSGVKLERTEHKSRRTVMRESAERISLSKRIHENEEYHKRLNEDSLMHTPEFVIKPRSH
TVWEKQCVRLHCTITGWPEPRVVWYKNNVSIDPMAHPGKYKLESSYNVHSLEINRCDFDD
TAQYRVSAMNSKGENAAYASVVVKRFKGELDEYLPTPRQQSRRFGCEVPCLEYGVTFETH
IVEKFGVAFGREGETLSFGCNVIIYPSLQRFQPEIEWYRDDKLLVPSKWMQTHWSGDRAT
LTLTHLNKEDEGLYTLRVITKSGFETHSAYVFVRDCDGEVAGAPGAPLDVQCQEANKDYV
IVTWKQPAVDGGSPILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLVEGRSYTFRVRA
VNKAGMSHPSRVSEPVAAMDPADRARKGTSAPWTGQIIVTEEEPVEGVVPGRPCDLSVIE
ATKNYVVLSWKPPGEKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSY
CFRVRCCNSAGVGEPSEPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASRDAKEL
VGYYIETSVAGSNAWEPCNNKPVKGTRFICHGLTTGETYVFRVRAVNAAGISDFSQESEA
IEVKAAIGGGIPHGVCLESVGIGVALTQHSSCGVGRHVASHSSAGAPLTRLANGIERAEG
GGQVGHPPTLNEGKQCKRGNVGPPEPTNKQEPEIAKPAENCSAESCTPDCIETEPETGSA
DNRKCSLNSSVEPEKAEEHGRGRRGSASPAPPYGITVLESVRDSMVLAWKQPTFIGGADI
TGYFIDYREVIGGVPGKWHEANIKSISERAYRVSDLKENMLYQFQVRAANMAGVGIPSQP
SEVFRCEEWTIAVPGPPHDLQIQEVRKDALVLLWKPPVYQGRDAVNGYYVDIKETDADFE
MWRGVNEKATDKKYMKIKDLKEGESYVFRVRAQNKAGVGKASETTEPVKAVTKPGTSEIV
VEVDDDGVISLNFQCSELTPDSKFIWSKNYEEMSDSDRMTLETKGNKSKAIFKTPSEEDL
GIYSCVVTHTDGVSASYTITEEGLKDLLKISHEHKFPIIPLKSELAVELLEKGRVRFWLH
AEKMSANGKVEYVFNDNMISQGEKYKMNFDKNTGIIEMFMETLSKDDEGTFTFQLQDGKA
TNQSSLVLIGDVFKQLQKESEFQRKEWHRKQGPHFVEYLSYEVTPECCVRLKCKVGNMKK
DSVALWYKDGREIKVNEKLDFSEGVLTLEIAQISKKDAGVYEVVVKDDRGKDTSTLNLTD
QGFKDLMNQVFSVIANSSTPLKIQSTEEGIRLYTFVSYYNDELHVTWHHKDAAIAFTDRI
KSGVVGEQLWLQISEPTEKDKGKYAIEFFDGKGGLRRTVELAGQAFDDAFAEFQRLKSAA
IAERNRARVAGGLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFES
GKFASFTITSVNTSDSGKYSILVKNKYGTESGDFTVSVFMPDEEKVSSSQTKKK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatccataccgttttaccagaaacatcatcgtcactatgatcgtggctaccgt
agccgggagacggagtctgctattagccaataccagcagaactccagcagttattcctca
cgtagcagcaaaagcacacagggcattagagctgccacatatacggcactagatgagggg
ggcatcagccccctgcccaagagagccaagcccacctatctggccatggacaaggagaac
cagatcatcggttatgtggtgcccatcttcaggggcagtcgtgagtttgaaagcggtctg
tcagacaccgaggaagcacgcgctaaagagagcgccggatatctggcacgccgtgacctc
ttcactagcggcgtgaagttggagcgcacagaacacaagtcccgccgaaccgtcatgaga
gagtccgccgagcgcatctcgcttagcaaaaggattcatgagaacgaggagtatcacaag
cgtctgaacgaggacagcctgatgcatacgccagagtttgtgatcaagccccgttcacac
actgtgtgggagaaacagtgtgtgcggctgcactgtaccatcacgggatggcctgaacca
cgcgtggtgtggtacaagaacaatgtctccattgaccccatggcccacccagggaagtat
aaactggagagcagctataatgttcactccctggagattaacaggtgtgattttgatgac
actgcacagtaccgcgtgtccgctatgaacagcaagggcgagaacgccgcatacgcttct
gtcgtcgtcaaaaggttcaaaggagagctggatgagtatctgcctactcccagacagcaa
agcagaaggttcggatgtgaagtgccctgtctggagtacggtgtgacttttgagacgcac
atagttgagaagtttggagtggcgttcggccgtgagggagagactctgagtttcggctgc
aacgtcatcatctatccatcactgcagcgctttcagccggagatcgagtggtacagagat
gataaactgctggtgccgtctaaatggatgcagacgcactggagcggagacagagctaca
ctcacgctcacacacctcaacaaagaggacgaggggctgtacacactccgcgtcatcacc
aaatctggttttgagactcactccgcttatgtgtttgttagagattgtgatggtgaggtt
gcaggtgcacccggagctcctttagatgtacagtgtcaggaggccaataaggattacgtc
atcgttacctggaaacagccagcggtggatggcgggagtcccatcttgggctactttgtt
gacagatgtgaggttggcactacacattgggctcaatgtaatgacactccggtgaagttt
gctcgtttccccgtcaccggtctggtggagggacgcagctacacctttcgtgtacgtgcg
gtgaataaggccggtatgagtcacccgtcccgtgtctctgaaccggtagctgccatggac
cctgctgatcgcgcacggaaaggtacatctgctccctggactggtcagattattgtaact
gaagaagagcctgtagagggagtcgttcccggccgaccttgtgacctcagtgtcattgaa
gccactaaaaactatgtggtactgagctggaagcccccgggtgagaagggtcatgaaggg
gtcatgtattatgttgagaagtgcgtttctggcacagacagctggcagcgagtaaacact
gaaatcccggtgaaatctccacgcttcgctctcttcgatctggcggagggcaaatcgtat
tgcttccgtgttcgctgctgtaactcggctggtgtcggagaaccatcagaaccgaccgaa
gccaccacggttggagacaaactggatatcccgtcagcccctggtcgtgtggtgccaacc
cgcaacacggacacgtctgtggtggtttcgtgggaggcgtcgcgtgatgctaaagagctg
gtgggctactacatcgagaccagcgtcgctgggagcaatgcctgggaaccctgcaacaac
aaacctgtgaaaggcaccaggtttatctgtcatggcctgaccacgggcgagacatacgtc
ttccgtgtgcgagcggtgaatgctgcaggaatcagtgatttctcacaagaatctgaagct
atcgaagttaaagctgctattgggggcggtattcctcacggtgtgtgtctggagtcagtg
ggtattggggtggcactaacccagcacagctcttgtggagtgggcaggcatgtggcgtct
cactcctccgctggcgcacctttaacacgcttagctaacggtattgagagggccgaggga
gggggtcaagtagggcatccacccacccttaacgagggcaaacagtgcaagagggggaac
gtagggccacccgaacccactaataagcaggaacctgaaatagcgaaaccggctgagaac
tgtagcgctgaatcgtgcacacccgactgtattgaaacggagccggaaacaggatcggcc
gacaatcgtaagtgctcgctaaactcgtctgtggaaccagagaaagcagaagaacacggg
agaggacgaagaggatcagcatcccctgctcctccctatggcatcactgtgttggaaagt
gtgcgggactcgatggtgttggcatggaaacagcccactttcattggtggcgctgacatc
accggctacttcattgattaccgtgaggtcataggtggagtgccgggaaaatggcacgag
gcgaacatcaagtccatcagcgagcgagcgtatagagtgtcggacctgaaggagaacatg
ctgtaccagttccaggtacgcgctgccaatatggctggcgtgggcatcccatctcagccc
agtgaggtattcagatgtgaggagtggaccattgctgttcctggaccaccccatgacctc
caaatacaggaggttcgaaaggacgctctggtgttgctatggaaaccacctgtgtaccag
ggccgtgacgctgtcaatggatactacgttgatattaaggagactgatgcagactttgag
atgtggaggggtgttaatgagaaagccactgataagaagtacatgaagatcaaggatcta
aaggagggcgagtcgtatgtgttccgcgtgcgagctcagaacaaggctggtgtaggaaaa
gcctcagagaccacagaaccggtcaaggccgtgactaaaccaggtacttcagagatcgtg
gtggaagttgatgacgatggcgtcatttctctgaacttccagtgttcggagctcactcct
gactccaaattcatctggtccaagaattatgaggagatgtcagattctgaccgcatgacc
ctggagaccaagggcaacaagtctaaagcgatctttaagacgccttcagaagaggatctg
gggatctactcttgtgtggtcacacacactgatggagtgtcagccagctacacaatcact
gaagaaggtctaaaggatctcctgaaaatcagccacgagcacaagttccctattattcct
ctgaagagcgagctggccgtggagttgctggagaagggcagagttcgcttctggctccat
gcggagaagatgtctgccaacggaaaagtcgaatacgtgttcaatgacaacatgatttcc
cagggagagaaatacaagatgaactttgataaaaacacaggcattattgaaatgttcatg
gagactctgagcaaagacgacgagggaacgttcactttccaacttcaggacggcaaagcc
actaatcagtccagtctggtgttgatcggagacgtcttcaagcagttacagaaggaatca
gagttccagaggaaggaatggcacaggaaacagggtccacactttgtggagtatctcagt
tatgaagtaacacctgaatgctgtgttagactgaagtgcaaggttggtaacatgaagaaa
gactctgtggctctctggtataaagacggacgtgagattaaagtcaatgagaaacttgat
ttctctgaaggagtgttgactctggagatcgctcagatctcaaagaaagatgccggtgtc
tatgaagtggttgtgaaggacgacagaggcaaagacacatcaaccctcaatctcactgac
caaggatttaaagatttgatgaatcaggtcttcagtgttattgccaactcttccactcca
ctgaagattcagagcactgaggagggaatcagactttacaccttcgtcagctattacaac
gatgagctgcacgtcacctggcatcacaaggacgcagcgatcgcattcacagatcgcatt
aagagcggtgtggtgggcgagcagctctggcttcagatttccgaacccactgagaaagac
aaagggaagtacgccatcgagttcttcgacggtaaaggaggtctgcgcaggaccgtggaa
ctggcaggacaggcgttcgatgatgcgtttgctgaatttcaaagactcaagtctgcagcc
atcgcagagagaaatcgcgctcgcgtggctggtgggctgcctgacgtcgtgaccattcag
gaaggaaaggctttgaatctgacctgcaacatctcaggagatccggtgcccgaggtcacc
tggctgaagaacgagcgtgagatggtttctgatgatcactacatcctcaaattcgagtct
ggcaagtttgccagtttcaccatcaccagcgtcaacacgtccgactccggcaaatacagc
atcctggtgaagaacaagtacggtaccgagagcggcgattttactgtaagtgtcttcatg
ccagacgaagaaaaggtgtcttcatcgcagacgaagaaaaaataa
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