Triplophysa rosa: 130556002
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Entry
130556002 CDS
T09216
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130556002 (arhgef40)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130556002 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RecC_4th
Motif
Other DBs
NCBI-GeneID:
130556002
NCBI-ProteinID:
XP_057192607
LinkDB
All DBs
Position
LG1:complement(820958..847244)
Genome browser
AA seq
1730 aa
AA seq
DB search
MGTEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTAEWLHCINKERGCKREGGGGCLDTCLVSTSDGVV
RIPWEEVVYPKLLHNPSDPLQDNADPTGLSSTSGGLGLGWVSSSGEHDSWSWDEEDDLPP
DGDEAETESALERLRRSSGTHLGDGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKTKT
LPLCRRGKAFRLRKGKVRAYGRTEPGGRAGGLVRRDSNNNGKDGVVSCRDQASSRPLPRV
IDLGRERRSYPLFQDFDEGARDTLGLESRTRDSTAKERRPGVGKERDGNGCTLSWEESQR
RRCSTDADDVANNKVNNLGAEDHSQRLQSVCDDTTLAGTLDCGNEIALLANPSKGAGNEF
PPENINKQLDDGTETRSTSLSDSLLYNEPDSLSCVQSTTEHSDDIRDLKTDAILSPSGEK
HDGKSEMCVGPRGKEVKPGGLRAPRRKRKGKGGKGKVKSNGRGQQKAKVDHTASKHQTKA
THPTDLTKSPKSLSSQSEDTPQPSEVCNGCATATNTETHAETDAKDRDPSCITEEQSPTS
FPEQPQKEMGLNTEFAAELKLKSPHLRDLDFNLLQSGKLMLTGTMDRLGRALVVTESHLP
EDGWNEDEMIKVLSCYYTITRPMAREKGLTVIVDSRKSSSSELCISALMAFKGRMAAGLD
SVLILSEEQDETIQPCLDGIEVHTVRGTAILQQFVDKQQLPREMGGDFNHSHSDWLAFRL
SLEELTERCESALTLLGDALQSMDAEPLPDCIKNVALSADKHRQLMTSILTDQRLTQLQQ
RGGTWLAGLANGMSGLAQKSPDCKAALAVTSDLYDGVDDALHRLVRVSNRRGCDLEALGR
LAALVDKLEKCEREIQQVQEQLEDYKHPPLSLSRLSLKQHKFKSFRESAMELHSETLVLL
GEVESWSELDWAGFKTVLDKLPPIREKVRDMSHCLSDCWTQLDNTQRLLSTLTEASQWCD
VVSSSSPSSSSSPLSSLPPIPPSRFQDARALALDLGGGPLLDLWSQTLERYQKTLAQFKS
RILQAEPRTPALSTSSLGELEGEIEPDWCPGAGGEGGVQSWGSLASLFRPQNCSTLKIGE
EKKKEGVNAGGGKFLQNLLHTAKKNPADAPLPPKPPRKRHPSFDLQALLAPRRSAAVSKP
AEPAASQSSPLSWLGRRALTDPILVAGVATAVPGWKDSAGGGGVLIRGVEVSSKEVADHT
GLTRQHVLLHRTERETGLERAGATAQSKLYLQWCRLVSTERQYVAVLKGVEENYLPLLES
SDAPSALRGKTETLFCNWKSLCAFHTQLLLPAMEGALSQTLQQADCFSKHKDQFLLYSHY
IRMRLEPDAPLIGQAADFFRVKLSSSLVPAPPFPQCLTAPIQRLDQYCQTLEELGGLNPT
SDSALSILRHAQRHGEDLRASDLITGCPMAVWDRGDLLRQGELCVCSGGRRKKTGVRHVF
LYQNYIIFTKHKTPNPGCSVFSFKHSIKTGEMGLTQSVGEDGLRFEVWVRQASRTRDCLT
LQTSSVQERETWTHDIAQLLWTHAMHNTELCLKESLCMGVSSKLLLDVTGAQTSELDSSF
SLNDRVQSSCSDSSSVGSLKEGDSPASARDSKRNTEQATHAQSSSPSTSV
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagaggcggtagaggactgcgtgcagggggcgctctcctctctctaccctccg
tttgaaagcaccgctcctcctctgctatctcaggtgttctctgtactcgagtcaacatat
caacacgacagcttgaggtatctgctggatttcttcattcctgccaaacaccttctgcac
aagttacagcagcacgcgtgttctcagtatctgggctgtctctttttgcactctggttgg
cctctgtgtttgggagagaaggtagtagtacaactctctaccttggattggagactcctg
cgtagtaccgatttctacctgcaggtggtgcctttctcgacacgttgccctcgccttgct
cttaagtgcctcgcacctggtggacgcaatgtacaggaggtcttagtgccggagtcacag
cacccgctagtgttcaccgccgagtggctgcattgcatcaacaaggagcgtggctgcaaa
agagaaggaggtggaggatgtttggacacctgtctggtgagtacatctgatggagtggtc
cgtattccatgggaagaggtggtctatcctaaactcctgcacaatccctctgacccactc
caagacaatgccgacccaactggcctgtccagcacttccggaggtctgggccttggttgg
gtctcctcctcaggagagcacgattcctggtcctgggatgaagaagatgacttgccccca
gatggggacgaggcagaaactgagtctgcgttagaacggctgcgaagaagcagtggcaca
caccttggcgatggtgctggagattacgtggaactgctggagcctcggggaggccctgac
ggcggtgccgatcctaaacaacgatacctggagatgcatgggatctgtaagaccaaaacg
ttgcctctgtgcagaagaggtaaagctttccggctgcgcaaagggaaggtgagagcgtat
gggaggaccgaacccggtggaagggccggcggtctggtacgaagggacagcaacaacaat
ggtaaggatggtgtagtgtcttgcagagatcaagccagctcacggcctttgcctcgcgtc
attgatttgggtcgtgagaggaggtcatatcctttgttccaggactttgatgaaggtgct
agagacacattaggcctggaaagtaggactagagacagcacagccaaagagaggaggcca
ggggtgggaaaagagagagatgggaatgggtgtacgctttcctgggaggaaagccagaga
aggcgttgttctacagatgctgatgatgttgcaaacaacaaagtgaataatcttggagcg
gaggaccacagtcaaagattacaaagtgtttgtgatgatacaacgttggccggcactttg
gactgcggaaatgaaattgcattattagcaaatccctctaaaggggcaggtaatgaattt
cccccagaaaacataaacaagcaactggatgatggaactgagacaagaagcacatccctc
tcagattccctcctatacaatgaaccggactccttgagctgtgttcaaagtaccactgaa
cactcagatgacatcagagatctgaagacggatgcaattctgtcaccatcaggagaaaag
catgatgggaagtcagagatgtgcgtcggtcccaggggaaaagaagtcaaacctggagga
ctcagagcacccaggaggaaaaggaagggcaaaggaggcaaagggaaggtcaaatcaaat
ggccgtgggcaacaaaaagccaaagttgaccacactgcctcaaagcaccagaccaaagca
acacacccaactgacttaactaaatcaccaaagagcctttctagccaatcagaggacact
cctcagccttcagaagtttgcaatggctgcgcaacagccacaaacacagaaacacatgca
gagacagacgccaaagatcgagatccatcatgtattacagaggaacagtctcccacatcc
tttccggaacaacctcagaaggagatgggattgaacaccgaatttgctgcagagttgaag
ctcaaatcaccccatctgagggacctcgatttcaatctcctgcagtcaggaaagctaatg
ttaacaggtactatggaccgattggggcgagcgttggttgtcacagagagtcacctcccg
gaggacggctggaatgaagatgaaatgatcaaagtgttgtcgtgttattacaccatcacc
agacctatggccagagagaaaggccttactgtgatcgtggacagcagaaagtcctcttca
tctgaactgtgtatctctgcactgatggcgttcaagggacgaatggcagcggggcttgac
tcggttcttattctttctgaagaacaagatgaaacaatccaaccgtgtctggatggaata
gaggtgcacacagtgcgaggcaccgcaatccttcaacagtttgtggacaagcagcagttg
cccagagaaatgggtggagattttaaccactcccactccgactggctggcgttcagattg
agtctggaggagttgactgagcgctgtgagagcgccctcaccctgctgggagatgcactg
cagtctatggacgcagagcctctacctgactgcatcaagaatgttgccctcagtgctgac
aaacacagacagttaatgacgagcatcctcaccgaccaacggctgacacagctgcagcag
aggggcgggacttggctggcaggtctggccaacgggatgtcagggttggcacagaaatct
ccagactgcaaggctgctttggcagtgacctctgacctgtatgacggcgtggatgatgcg
cttcatcgactggtacgcgtgtccaatcggaggggctgtgatctggaggctctgggacga
ttggctgcgcttgtggataaactggagaagtgtgagcgtgagatacagcaggtccaggaa
cagttagaggattataaacatccaccgctgtctctcagcagactgtctctcaaacagcac
aagttcaagagcttcagagaatctgctatggagcttcacagcgagactctggtgttgctg
ggagaagtggagagctggtctgagctggactgggccggtttcaagacagtgctggacaaa
ctgcctccgattagagagaaagtgcgagacatgtcgcactgtctgtctgactgctggaca
caactggacaacacacagagactgctgtccacacttactgaagcgtctcagtggtgtgat
gtggtgtcatcttcatcaccctcctcgtcctcgtctcctctctcctccctccctcccatc
cctccgtcacgtttccaggacgctcgtgctctggctctggatctgggcggcgggccttta
ctggacctctggtctcagactctggagcgctatcagaaaactctggctcagtttaagagc
cggatcctgcaggcggagcccagaactcccgcgctcagcacgtccagcctcggggagcta
gagggcgagatcgagccggactggtgtcccggcgcggggggagaggggggtgtgcagtcc
tggggttcgctggcgtctctctttcggccgcagaactgctccacgctgaagatcggagag
gagaagaagaaagagggagtgaatgcaggaggaggaaagttccttcagaacctgctgcac
accgccaagaagaaccccgcagatgcccccctccctcccaaacccccccgcaagcgtcac
cccagttttgacctccaggctctgctggccccgcgtcgttcggccgccgtgtctaaacca
gccgagccggcggcgtctcagtcctccccgctgtcctggctgggccggcgggcgctgacg
gaccccatcctcgtggcgggcgtggctacggctgtcccgggatggaaggattcggctgga
gggggcggagtcctcatcagaggagtggaggtcagcagtaaggaggtggccgatcacacc
ggcctcacgcgacaacatgtgctgctccaccgaaccgagagagagacgggactggagaga
gcaggagccaccgcacagagtaaactgtatttgcagtggtgtcgtctggtcagcacagag
cgtcagtacgtggccgttcttaaaggcgtagaggagaattatctgcccctgctggaatcg
tcggacgccccgtctgcactgcggggtaaaacagagacgctcttctgtaactggaaaagt
ctctgtgccttccacacgcagttactcctccccgccatggagggcgctctctcacagacg
ctacagcaggccgactgtttcagtaaacataaggatcagttcctgctgtattcccattac
atccgcatgagactcgagccggacgctccgctcatcggtcaggctgccgacttcttcagg
gtcaagctgtcgtcctctctcgttcccgctcctccgttccctcagtgtctcaccgctccc
attcagagactggatcagtactgtcagacgctagaggagctgggcggtcttaaccccacc
tctgactccgccctctccattctcagacacgcccagcggcacggagaggatctgcgagcc
agtgacctcatcacagggtgtccgatggcagtgtgggatcgcggggatctgctgcgtcag
ggtgagttgtgtgtgtgcagcggaggcagacgcaagaagacgggcgtgagacatgtcttc
ctctatcaaaactacatcatcttcaccaaacacaaaacgcccaacccagggtgcagtgtg
ttcagcttcaaacacagcataaagacgggtgaaatgggtctcactcagagcgtcggcgag
gatggactgaggttcgaggtgtgggtgagacaggcgtctcgcaccagagactgtctcact
ctccagacgtccagtgtgcaggagagagagacttggacccatgacatcgctcagctcctc
tggactcacgccatgcacaacaccgagttgtgtctgaaggagtctctgtgtatgggagtg
tccagtaaactgttactggatgtgacaggtgctcaaacctcagaactggactccagcttc
agcctgaacgacagagttcaaagcagttgttcagactcatcgtctgttggcagtctgaaa
gagggcgactcgcccgcatccgcacgagactcgaagagaaacactgagcaggcgacacac
gctcagagctcttcaccctccacctctgtctga
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integrated database retrieval system
