Triplophysa rosa: 130556010
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Entry
130556010 CDS
T09216
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04514
Cell adhesion molecules
tros04672
Intestinal immune network for IgA production
tros04810
Regulation of actin cytoskeleton
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130556010 (itga4)
04514 Cell adhesion molecules
130556010 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130556010 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130556010 (itga4)
04810 Regulation of actin cytoskeleton
130556010 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130556010 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130556010 (itga4)
04515 Cell adhesion molecules [BR:
tros04515
]
130556010 (itga4)
04090 CD molecules [BR:
tros04090
]
130556010 (itga4)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130556010 (itga4)
Exosomal proteins of other cancer cells
130556010 (itga4)
Cell adhesion molecules [BR:
tros04515
]
Integrins
Integrin alpha subunits
130556010 (itga4)
CD molecules [BR:
tros04090
]
Proteins
130556010 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
130556010
NCBI-ProteinID:
XP_057192631
LinkDB
All DBs
Position
LG6:complement(4221503..4241790)
Genome browser
AA seq
1022 aa
AA seq
DB search
MCGAMAFLHLKRDLKWRCTSGIFSWYLLILCDCYNLDVEHPLIFNGPSGSLFGYSVLLHQ
HAENTWLIAGAPVANSSFYPNIKSPGAVYNCSMWSSQCEQLPVGGVRQCGKHCLAENDNQ
WLGVSLSRQPSKGYVLACGHRWKNVYYSKKDGQNKLPHGVCFRFSPDLKHSSHIIPCYKD
HQRKFGEGYGSCQAGIANQFTEDLMIMGAPGTSYWTGSVLVYNTTSDISAAYVDDDSEVL
YGSYLGYAVGAGHFLHPQSTEIVGGAPQHEQTGKAYIFRIEGNTLKIVNETKGKKLGSYY
GASVCAIDLNADGLSDLLVGAPMFSSVREEGRVHVYINRGEANLKEAEFELVGSDSYAAR
FGETIVNLGDIDDDGYPDVAIAAPQEDDLLGAIYIYNGRRTGIAQSFSQRITGSLLGSDL
RMFGQSVSGGVDIDGNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMILPESVNRSVAHCF
ESGQPAVCVDIKVCFRVGGKQIPGNIEIKYNLTADVHHKEAFPSRFYFQGNGTSNFTSGR
VKVKHEKLTCAFHQAFMKKDVRDIFTPINFQVKYDLGGHSVLQQDPRGLSALKPILQQKE
MSNVVKNQTMFARYCAWENCSVNLQVSAHLVLPQSYRNMRYFALGNGKSLMLNTTLINTG
DDAFLPKLHLRFPSNLHFIKALEEDKYVSCEIAEENKVAVGLDCSVGNLYIPPFTKLNIT
FLLDMMQNSSAGDLGISINATSESFENPDLLHDNVVILTLPLRYAVDVNVHGFVSPTSFV
IGDQESVPVDCYSDKFNYTYKVMNMGPSKALDAKVEIATPLMLLPYKYQLIRIADLQTTL
GRCFLRNDTVQVIGDCDVPTASFIKELVFFFSPKSKRTMFCGSEDKTCRAVECHFGDLEV
GKEVTITMEVELNPRVLQLSPGRHSVMTIHSMIDFISPVRDVNTILLKDDISAGVVLEAL
YNQKPSSTVSIFLIVSSLVVGLIILAMLVILLWKLGFFERKMKMEKFKRDSWDYVPKHES
MS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtgctatggctttcttacatctaaagagagatttgaaatggagatgcacctct
gggattttttcgtggtacctgttgattctgtgcgactgttacaatctggatgtggagcat
cctttaattttcaatggacctagtggatctttattcggatactctgttctgcttcaccag
catgctgagaacacatggctgatagcaggagcgcctgtggcaaactccagcttttatcct
aatatcaaaagtcccggagctgtctacaactgcagtatgtggagctcacaatgtgagcag
ctgcctgttggaggtgtgcggcagtgtgggaaacattgtttggcagagaatgataaccag
tggctgggtgtgagtctgtcccggcaaccctcaaaaggctacgttttggcctgtggtcat
cggtggaagaacgtctactattctaaaaaagatggccagaacaagcttccacatggcgtt
tgctttagattcagcccagatttgaaacactccagtcatatcatcccctgctataaagat
catcaaaggaagtttggtgaaggttacgggtcatgccaagctgggatagccaaccaattc
acggaggacctgatgatcatgggcgctcccggcacctcatactggaccggatccgtgctt
gtttataacaccacgagcgacatttcggcagcttatgtggatgatgacagcgaggttctt
tatggcagttatttaggttatgctgttggtgctggacactttctacatccccagagcact
gagatagttgggggagctcctcagcatgaacagactggtaaagcctacatattcaggatc
gaaggcaacactttgaaaattgttaatgaaaccaaaggcaaaaagctgggctcgtattat
ggagctagtgtttgtgctattgacctgaatgcagacggcctgtccgatctgctggtagga
gctcctatgttcagctctgtgagggaggagggacgtgtacatgtttacattaaccgggga
gaggctaatctgaaagaggcggagtttgagttagtcggcagcgattcttatgccgctcga
tttggagaaaccattgttaaccttggagacatcgatgacgacggatatccagatgtggcc
atcgcagcccctcaggaggacgatttgcttggtgctatatatatctacaatggaaggaga
actggtatagcacagagtttttctcaaagaataacaggctctctgttaggcagtgacctc
aggatgtttggtcagtctgtgtctggaggagttgatattgatggcaacaattacccagat
gttgctgtgggagcttttctctcggactcagctgtggtgttcaggacacgtcccgtggtg
aaggtggatgctgtgatgatactgcctgaaagtgtgaatcgctctgtagctcactgcttt
gagagcggccagcctgctgtgtgtgtcgatattaaggtgtgctttcgagtcggagggaaa
caaatcccaggaaatatagagatcaagtacaacctaaccgcagatgttcaccacaaagag
gcctttccatctcgattttatttccaaggaaacggaacgtctaattttacgtcaggcaga
gtgaaggtcaaacatgaaaagctcacctgcgccttccaccaggccttcatgaagaaagac
gttcgcgatatcttcacgcccatcaatttccaggtgaaatatgaccttggagggcacagt
gtgctgcagcaggaccccaggggcttatcggctctcaaacccattctacagcagaaagaa
atgtcaaatgttgtgaaaaaccagaccatgtttgccagatattgtgcctgggaaaactgc
tcagtcaaccttcaggtgtccgctcatttggttttaccacagtcttacaggaacatgcgt
tattttgctctgggtaatggaaagagtctcatgttaaatacaacactgatcaacaccgga
gacgatgcgtttcttcccaaacttcacctgaggtttcccagcaacctgcatttcatcaaa
gcgctcgaagaagataaatacgtgagctgtgaaatcgctgaggaaaataaagtggccgtc
ggtttggactgcagcgttggaaatttatatatcccccctttcacaaagctcaacatcact
tttctactggacatgatgcagaacagcagcgcaggagacctcggcatcagtattaatgcg
acaagcgagagttttgaaaaccccgatcttctgcatgacaacgtggtcattctcacattg
cccttaagatacgccgttgatgtcaatgtacacgggttcgtctctccaacttcatttgta
attggagaccaagagtctgtgccggtcgactgctattctgataagttcaattatacgtac
aaggtgatgaatatgggtccaagcaaagctctcgatgcaaaagttgagatcgccacgcct
ctaatgcttctgccgtacaaataccaattaatcaggattgcggatttacagacaactctc
ggtcgttgcttcttaaggaacgatacagttcaggtcattggtgactgtgacgtccccacg
gcttcttttataaaggagctggtcttcttcttctcaccaaaaagcaaacgcacaatgttc
tgtggatctgaagataagacctgtagagcggtggagtgtcactttggggatctggaggtc
ggaaaggaggtcaccatcactatggaggtcgagctgaaccccagagtcctccagctcagt
ccaggcaggcattcggtaatgacgatccatagcatgattgactttatttcaccggtgagg
gatgtcaacaccattcttttaaaggatgatatttctgctggagtagttttagaggctctt
tacaaccagaagccttcgtcaactgtgagcatttttctgattgtttccagtctggttgtc
gggcttattattttagccatgcttgtcattctgctctggaagcttggattctttgagcgg
aagatgaagatggaaaagttcaaacgggacagttgggactatgtacccaagcacgagagc
atgtcttaa
DBGET
integrated database retrieval system
