Triplophysa rosa: 130556039
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Entry
130556039 CDS
T09216
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
tros
Triplophysa rosa
Pathway
tros04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130556039 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130556039 (ube3c)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130556039 (ube3c)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
HECT type E3
130556039 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7673
Motif
Other DBs
NCBI-GeneID:
130556039
NCBI-ProteinID:
XP_057192676
LinkDB
All DBs
Position
LG1:23855910..23892518
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AA seq
1081 aa
AA seq
DB search
MFSFEGDFKRTPKVSLGGASRKEEKASLLHRTHEERRKREDERRRLKNAIIIQSYIRGYL
DRKQQYAIQRGHFDHCVCQCQSGSGPPLADSGTLSQLVRQLLFFYRLSEDTHRLIWMCQS
LIKHHAQFFKLLVGPERQNCLFQIKRILGHCCRLLQACRDDSLNVAVPMRMLEVFTSDRT
YMPVLQDANCVTALIEQILHYMVQKGHYRALYVLVNHKLPSSLEYSDAPSIPLAHTLLEH
ILKPLHLTYGSCPPDARQFVFSAFTKEFISAPFTEQIYHFFVPALADSRLAFPFQNFLWS
LQATIASSAHARAQAPWLFYFVLTVGETGLGSLSEEGLLLYLNALQTLLPLLPVTESTSR
ADINSDSEDEEQMNIQHHATRDGSWISVHSITEECVQKLDTKQQTNALLTLVWRDSASED
IFTMMASICHTLMVQHRMMVPRVRLLYSLAFNARFLRHLWHLITSMKTKMITGSMVLLLQ
VMSRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGSSVDGQSQPSMMPFSLTEL
VTLSRCLRDACLGIIKLAYPETKTEHKEEYVAAFRSVGVKTNSQVQQCIQAQQKRWVQLF
KVITNLVKMLKARDIRRSFCPSGHWLSDGVNIRADKVTQLYVPSARHVWRTRRMGRIGPL
QSTLDVGLEPPPLSVSEERHLAILTELPFVVPFEERVKIFQKLIYADKREVQGDGPFLDG
ISVSIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SGFNPNQGFFKTTNEGLLYPSPTAEMLVGESFTRHYYFIGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEDLGLNFTVVNNDLGEAQVVEL
KPGGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLANVVNLEWLRMFDQQEFQV
LISGALVPISLEDLKSFTNYSGGYSANHPVIQIFWDVVDSFSDEEKRQLLKFVTSCSRPP
LLGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFSDPQQMRNKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttgagggagatttcaagagaacacctaaagtgtcccttggcggtgcaagc
agaaaagaggaaaaagcatcacttcttcatcgaacacacgaagaaagaagaaaaagggag
gatgaaaggagaagactaaaaaatgcaatcatcattcagtcctacataaggggataccta
gataggaaacagcaatatgccattcaaaggggccacttcgaccactgtgtgtgtcagtgc
cagtcaggctccggccctccgcttgcagacagtggaactcttagccaactagttcgccag
cttctctttttttacagattgagtgaagacacacacagattgatctggatgtgtcagagt
ttgataaagcaccatgcacagtttttcaagctgcttgtggggccagaaagacagaactgt
ctgtttcagatcaaacggatactgggacactgttgcaggctgctacaagcatgtagggat
gacagtctgaatgtggcggttcctatgcggatgctagaggttttcacctctgacagaaca
tacatgcctgttctacaagatgcaaactgtgtcactgcacttattgagcaaatattgcac
tatatggttcagaaaggacactacagagcgctgtatgttttagtcaaccacaagttgccg
tccagtctggagtacagtgacgccccctctattccgctagcgcacacactgctagaacat
atactcaagcctctgcacttaacatatggctcctgccctccagatgccaggcagtttgtg
ttttcggccttcaccaaggagttcatctcagcgccttttactgaacaaatctatcatttc
tttgtgccagctctggcagactcgagactagctttccctttccagaacttcctttggtca
ctccaggccaccatagcttcctctgcccatgcacgagctcaggctccatggctcttttat
tttgtattaacagttggagaaacaggactgggttcactctcagaggaagggttgctgttg
tatttaaatgctttacagactttgttgccattgctgccagtgactgaaagcaccagtaga
gctgacatcaacagtgattcagaagatgaggaacaaatgaacatacagcatcatgccaca
cgggatggaagttggatatctgttcattccataacagaggaatgtgtgcagaagttggac
accaagcagcagactaacgctttgctaacattagtgtggagagactctgcaagtgaagat
atcttcactatgatggcctctatctgtcacacactgatggtgcaacaccgtatgatggtg
ccccgagtcaggcttttgtacagcttagccttcaatgctcggtttctgagacacctctgg
cacttaatcacatccatgaaaactaaaatgatcacggggtccatggttcttctattacag
gtaatgtctcgtggttctccaatgtctctagaggattccaacaggatcatccctctcttc
tatctcttcagttcactcttcagtcattcactcatctccgtgcatgacagcgagttcttt
ggcagctcagtggatggtcagagtcagccatcgatgatgcccttctctttgacagagttg
gtgactttgtctcggtgtttgcgggacgcttgtctgggaatcatcaagctggcctatcct
gagactaagaccgagcacaaagaggagtatgtagcagcgttccgcagtgtcggggtgaaa
accaacagccaagtgcagcagtgcattcaggctcaacagaaacgatgggtccagctgttt
aaggtgattaccaacctcgtgaagatgttgaaagcaagagatattcgaagatcattctgt
ccatcgggtcattggctgtctgatggagtcaacatcagggcggataaggtcactcagctt
tatgtaccttctgcaagacatgtgtggagaactaggagaatgggtcgcatcggaccgctt
cagtccacattagatgttgggctagagcctccaccgctgtcagtatcagaggaaagacac
ttggccatcctcactgaactaccatttgttgtgccctttgaggaaagagtcaagattttc
cagaagttgatctatgctgataagcgggaggtgcagggcgatggcccatttttggatggc
attagcgttagcattcgacggaactacatatatgaagacgcgtatgataaattatcccct
gagaatgagcctgatctaaagaagagaataagggttcatctgctcaatgctcatgggttg
gatgaagctggtattgatggtggaggaatattcagagagttcttgaatgagttgttgaaa
tcaggctttaaccctaaccaaggcttcttcaagacaactaatgaagggctcctttacccg
agccccacagcagagatgctcgtaggcgaatcctttacccgtcactactacttcattggc
aggatattaggaaaggcactgtatgaaaacatgctagtggaattgccatttgccagtttc
ttcctgtcgaagctcctaggcaccagtgcggacgtagacatccaccatctggcctctttg
gacccagagatgtacagaaacctgctttttctcaagagttatgaaggtgatgtggaagac
ctcggccttaacttcactgtggtcaacaatgatctcggggaggcgcaggtggtcgagctc
aaaccagggggaaaggacatcccggttactacggccaacaggatagcctacatccattta
gtggccgattaccgtctgaacaaacaaatcagagcacactgcctggccttccggcagggc
ctggccaacgtggtcaacctggagtggctgcgcatgtttgatcagcaggaatttcaggta
ctgatttccggtgcacttgttcctatctctctggaagacctgaagagcttcaccaactac
tcgggtggttattcagcaaatcatccagtgattcaaatcttctgggatgtggtggacagc
ttcagcgatgaggagaagcgccagctgcttaagtttgttacgagctgctcacgaccgcca
ctcttaggattcaaggaactctatccagccttttgcatccacaatggaggtactgacctg
gagcgtctccctaccgctagcacttgcatgaaccttctcaagctgcccgagttctctgat
cctcagcaaatgagaaacaagctactttatgctattgaatcctctgctggcttcgagctt
agctga
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