Triplophysa rosa: 130556057
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Entry
130556057 CDS
T09216
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tros
Triplophysa rosa
Pathway
tros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130556057 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130556057 (hspd1)
03110 Chaperones and folding catalysts [BR:
tros03110
]
130556057 (hspd1)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130556057 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130556057 (hspd1)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130556057 (hspd1)
Messenger RNA biogenesis [BR:
tros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130556057 (hspd1)
Chaperones and folding catalysts [BR:
tros03110
]
Heat shock proteins
HSP60 / Chaperonin
130556057 (hspd1)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130556057 (hspd1)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130556057 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
130556057 (hspd1)
Exosomal proteins of breast cancer cells
130556057 (hspd1)
Exosomal proteins of colorectal cancer cells
130556057 (hspd1)
Exosomal proteins of bladder cancer cells
130556057 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130556057
NCBI-ProteinID:
XP_057192703
LinkDB
All DBs
Position
LG6:9530214..9536157
Genome browser
AA seq
575 aa
AA seq
DB search
MLRLSTVMRQMRPVCRALAPHLTRSYAKDIKFGADARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAVAKEGFDTISKGANPVEIRKGVMTAVETVINELKKTSKPVTTPEEIAQVATISSNGDT
EVGEIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLLDIAVSTGGTVFGDDAMGLAIEDIQAHDFGKVGEVIVTKDDTMLLKG
RGDSAAIEKRVNEIAEQLDSTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDNIKPANADQKIGIDIIRRTLRIPAMTIA
KNAGVEGSLVVEKILQSAPEIGYDALNGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLC
TAEAVVTEIPKEEKEMPGGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttatccactgtgatgagacagatgaggccggtgtgcagggcgctggcccca
catttgacccgttcatatgcaaaggacatcaagtttggtgccgatgcccgggccctcatg
ctccagggcgttgacctgttggctgatgctgtggctgtcaccatgggaccaaagggtcgc
aacgtcatcattgagcagagctggggaagccccaaggtcaccaaagatggtgtcacagta
gccaaaagcattgacctgaaggataagtataagaacataggagccaagcttgtacaggac
gtggctaacaacactaatgaggaggctggagatggcacaacaaccgccaccgtgctggcc
cgtgcggttgccaaggagggatttgacactatcagcaaaggcgccaaccccgtggagatc
cgtaaaggagtcatgacagcagtagaaaccgtcatcaatgaactcaaaaaaacctctaag
ccagtcacaacaccagaggagattgcccaggtggccaccatttcttccaatggagacact
gaggttggtgaaatcatctccaatgccatgaagaaagtaggacgtaaaggtgttattaca
gtaaaggatggtaaaaccctacatgatgagcttgagatcattgaaggaatgaagtttgac
cgtggttacatttctccttacttcatcaacactgctaaaggtcagaagtgtgagttccag
gatgcttatgtgcttctaagtgagaaaaagatatccagcgtacagagcattgtgccggca
ctggaacttgctaaccagcatcgcaagcctctggtcattgtggctgaagatgtggatgga
gaggcacttagcactctggtcctcaacaggttaaaggttggactgcaggttgttgcagtc
aaggctccaggattcggggacaaccggaagaaccagctgctggacatagccgtgtccact
ggtggcactgtgtttggtgatgatgctatgggtctggccattgaagatatccaggcacat
gactttggcaaggttggcgaggtcattgtgacgaaagatgacacgatgctcctcaaaggc
cgaggtgattcagcagccattgagaaacgtgtgaatgagatcgccgaacagctggacagc
acaaacagcgactatgagaaggagaaactgaacgagcgtctggcaaaactctctgatgga
gtggctgtgattaaggttggaggaacaagtgacgttgaagtaaatgagaagaaagaccgt
gtcactgatgctctgaacgccactcgagctgctgtggaggagggaattgttcttggtgga
ggatgtgccctcctgcgctgcatcccagccctggataacatcaaacctgccaatgctgat
cagaaaataggtatcgacattattcgcagaactctgcgtattcctgccatgaccattgct
aagaacgccggagttgagggctctctggtagttgagaagatcttgcagagtgctccagaa
atcggatacgatgctttgaatggagaatatgtcaacatggttgaaaaaggaattattgac
cccacaaaggtcgtaaggacggcactattggatgctgcaggtgttgcttctctcctgtgt
accgctgaagccgtcgtcacggaaattcccaaggaggagaaggaaatgcctggtggagga
atgggtggcatgggtggtatgggaggcatgggtggcatgggcttctaa
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