Triplophysa rosa: 130556112
Help
Entry
130556112 CDS
T09216
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130556112 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Protocadherins
130556112 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
CD34_antigen
TMEM154
Motif
Other DBs
NCBI-GeneID:
130556112
NCBI-ProteinID:
XP_057192801
LinkDB
All DBs
Position
LG6:complement(1098024..1106081)
Genome browser
AA seq
967 aa
AA seq
DB search
MEQRLLFVWIVGMTLICILVVSDVVSEERTVRYKIYEEVRPPTVIGTLASNVTWTPDKTR
TFPGIRFKLMSPSPGTFIRFRESDGRLTVEERIDRERVCKRNPRCVITFDVAFVSAEQFE
LFHVEVEVMDVNDNSPEFPRAECTIDISESAAVGTRIPLDAAEDADVGSNSIQSYHITEN
THFSIDVITRVDGVKYAELVLVKVLDRESRAFYALKLVATDGGHPPKSGSTNVTVKVKDA
NDNSPVFDQSHYSIDLPEDAPVDSVVLDLNAIDPDEGLSGEVVYELGKQVTTKIRQQFKM
DYKTGQLTLRSPVDYEDETTYEIDVQATDLGQNPVPSVCKIIVNIGDVNDNPPEIIITSI
TPLIDGVAHVSEATSPDILVALISIKDKDTGANGQVSCTLNGGQSNFRLKRAYEGSYTIV
TMAPLDREKLPEYNLTVVAEDFGAPPLRTVTSFIIRLTDVNDNAPVFSAKIYEGFIEENQ
LPGTYITTVLASDRDSGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVAKRL
DLRVQASDRGWPQLHTNAVLVINIVDQNDNAPSITQPPLNNGSAEIQLPRDAPPGYIVAR
ITAKDLDAGLNAELTYKLYDGGDFGFAIDPNTGEIYINRKIAHDAFDIWKVLVTVNDNGH
PSLTSTATIHFTFTESAPSNGNFYDERQEEEPKHWMLVLILALTSSSVLFFVVLSYILCR
SRRNGQKRRAEDVPYSKENHAVSVISNQTANVFDAHTTVINTPEKLHSSVQATAEAFEEA
PQTFKNKYRSVAGEIDGYSTLPGYGKETARPITVWKGNSMMTIAVRDPHISGKDSGKGDS
DVNDSDSDISEGMKKDYTSYKGLWACTSECRILGHSDRCWSPSVSRTSASVNPRHLSTFS
RTRPSSQGTLQRSGFETALQSLTEDQQTQYDYIHVCSPQSQRRQDITVFTHSTEAIQTNS
PARFTDA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagacttttgttcgtgtggatagttggaatgacactaatttgcattttggtt
gtgtcagacgttgtgtccgaggaacgaacggtgagatataaaatatacgaggaggttcgt
ccgcctacggtcatcggaacgctagccagcaatgtaacctggaccccggacaaaacccgg
acctttcccggaatacggtttaaactgatgagtccatcccctggcacctttatccgattt
agagaaagcgacggaaggcttacggtcgaggagcgcatcgaccgggagcgcgtgtgcaag
cgaaatccgcggtgcgtaatcacgtttgatgtggcttttgtgtccgccgagcagttcgag
cttttccacgtcgaagtggaagtgatggacgtcaacgacaactcgccggagtttccgcgc
gccgagtgcaccatcgatatctccgagagcgcggcggtggggacgcgcatccctttggac
gcagccgaggacgcggacgtgggctcaaactccatccagtcctaccacatcactgaaaac
actcacttcagcatcgatgtcattacgagggtggatggggttaaatatgcggagctggtg
ctagtgaaggtgctggaccgagaaagtcgcgcgttttacgcactaaagctcgtggcgacg
gacggaggacatcctccgaaaagcggttccaccaatgtgaccgtaaaagtcaaagacgcc
aatgacaacagtccggtttttgaccagagccattactctatcgatttgccagaggatgcg
cccgtcgactctgtcgtattggatttaaacgccatcgatccggatgagggtctaagcggg
gaggttgtgtacgaactaggcaagcaagttacaacaaagataagacaacagttcaaaatg
gattacaaaacgggacagttgactctgcgaagtcctgtcgattacgaggacgagactacg
tatgaaatcgacgtgcaagccaccgatttgggacaaaatccggtcccttccgtgtgtaaa
attatcgttaatataggagatgtgaacgacaaccctcccgaaataatcatcacatctatc
acacctctaatagatggcgttgcgcacgttagcgaagcgacaagtccagacatcctggtg
gctttaataagcatcaaagacaaggacactggggcgaatggacaagtcagctgcactctt
aacggcggacagagcaacttcagactcaaaagagcttacgagggcagttacacaatagtc
acgatggcacccctcgacagagaaaaactcccggagtataatctgactgtggtggctgag
gatttcggtgcgccaccgttacgcacggtcaccagttttatcatacggcttacagacgtc
aatgacaatgcccctgtgtttagcgcaaagatatacgagggctttatagaggaaaaccaa
ctgcctggtacctacatcaccacagtgctggccagcgatcgagattcgggtctcaacggg
gaaataacctacgagctttttgactcggacaccaacagcgtctccaggtttgccatcatg
aatcaagcgggtaacgtttacgccctccaaagtttcaattacgaggtcgcaaagaggctg
gatttgcgcgtccaggccagtgacagaggatggccacagcttcacaccaatgctgttctc
gtcatcaatattgttgatcagaacgacaacgccccctctattacacagccaccccttaac
aatggctctgccgaaatccagctgcccagagacgcgcctcccgggtacatcgtcgcccga
ataacggcgaaagatttggacgcgggtttaaatgccgagctcacctacaagctttacgac
gggggggattttggcttcgcaatcgatcccaatacgggggaaatatacatcaaccgcaag
attgcgcacgacgcgttcgacatatggaaagtgttggtgacggtcaatgacaacggacac
ccgtcactaacttcaacagccactattcatttcacttttaccgagtctgcgccttcaaac
ggcaatttctacgacgaaagacaggaggaggagcccaaacattggatgctggttttaata
ctggccctgacgagctcttctgtgctcttttttgttgttttgtcgtatatattatgcaga
agtcgcaggaacggacagaagagacgcgcagaggatgttccttattctaaagagaatcac
gccgtgtccgtgatctctaaccagaccgccaatgtgtttgacgcgcacacgactgtcata
aacactcctgaaaaactccacagcagcgtgcaggcgactgccgaagcgtttgaggaagcc
ccgcagaccttcaagaacaaatacaggagtgtggcgggggaaatagatggatactctact
ttgcctggttatggtaaagagacggcacgacccatcacagtatggaaagggaactcgatg
atgaccatcgcagtgagagatccacacataagcgggaaggacagtgggaaaggagacagc
gatgtgaacgacagcgattctgacatcagtgaaggcatgaagaaagactacacttcatat
aaaggtctgtgggcctgcaccagtgagtgccgtatcctgggtcattcggaccgatgctgg
agtccatctgtaagcagaaccagcgcaagcgttaatcccagacatctgtcgaccttctca
aggacacgtccgtcctcacagggcacgctgcagagaagcggctttgagacggccctgcag
agcctcacggaggatcaacagactcaatatgattacattcatgtttgctctccacagtca
cagagacgacaagatatcacagtattcacacattctacagaagccatccagacaaacagt
cccgcgagatttacagacgcttga
DBGET
integrated database retrieval system
