Triplophysa rosa: 130556113
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Entry
130556113 CDS
T09216
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130556113 (pcdh8)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Protocadherins
130556113 (pcdh8)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130556113
NCBI-ProteinID:
XP_057192802
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Position
LG6:1124879..1131554
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AA seq
949 aa
AA seq
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MKSYCSCVIFACVIYKSFCTTTKYFTFEEDAPGTEIGNLSQDLKMDPAEDPETSFKFMQK
TNPSVIHMRQMDGLLTVGETIDRELLCHRSPQCLVTFDVVAFSKGKFQLIHVEIEIKDIN
DHAPWFARNETHMEISEDAPLRARFPLDIAVDRDVGDNYIQSYQITHTNHFAVEVSTQED
GTKYAELVMIKTLDRETEEFYTIEVTATDGGAPPKSGSTTVYIRVLDFNDNSPTFEHSSL
KVELNEDSPVGSRVLKVHAFDSDAGINGEVVYGFVEGSPSDVTRVFQIDLISGEVTLKDA
VDYEKKKSYEFHIQASDLGTSSVSSTCRAIVDIVDVNDNAPEISIKPMTSTSDGVAFITE
AAAVESFVALVSTSDSDSGPNGYVRTSLRGHEHFKLQQAYSDTFMIVTTATLDRETISEY
NLTVVAEDLGTPPFKTVTHYTIRITDENDNAPVFSKDIYDVSVIENNIPGSYITTVVARD
LDTGKNGKVSYSLVDGKTRDGAALSTFVSIDPVSGSLYTLRSFNFEAFKEVQFTVKATDK
GSLPLSSTALVRIHVVDENDNSPYFTYPVLRNHTADIPIPLNAQRGYLALCVTALDEDNG
DNSELSFHILENDAQLFFMDKKSGEIILRQSLTASCGEVLQVRVSVVDNGREPLSTTATI
RFVVTDTGSQEDHVVILLRSKDEETLSFDVGMVVILATAGGCALLLTAIGILAVTCNRRC
RRRNYGRDGLYGSSPFSKSNTVTSDIYGGPGAFLPHEGDSVHHCLYEDKSLDFEEKLFLP
CKPFEQTFLWQDEKYCLQRSGTSNTDQLSVKDSGKGDSDFNDSDSDTSAAALKRSLTTFQ
PVSRSSFTCVGDWKGKQRVIQTQNMHVPPGTPYTIGFSAPVYNMSHVHSHPWKEGFNKTN
TLQTFSRTPARPSNPLHPLEGRTADVEEQTEPVKDALTVLAVCEVATTF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctattgcagctgtgttatatttgcgtgcgtcatttacaaaagcttttgtaca
accacgaaatacttcaccttcgaggaagacgcgcctggcacagagattggaaacctttca
caggatttaaaaatggacccggctgaggaccccgagacatcgttcaaattcatgcagaag
acaaacccgtccgtaattcacatgagacagatggacgggctcttaacagtcggagaaacc
atcgatcgagagctgctgtgccaccggtccccgcagtgtctcgtaacttttgatgtcgtc
gccttctcaaaaggaaagtttcagctcattcatgtggaaatcgagataaaggacatcaac
gatcacgcgccttggtttgcgcgcaacgagacgcacatggagatatcagaggatgcgcct
ttgcgcgcgcggtttcccctggacatcgcagtggaccgggacgtcggagacaactatatc
caaagttaccaaattacgcacacgaatcatttcgccgttgaggtcagcacgcaggaggac
gggaccaaatacgccgaactcgtgatgatcaaaacacttgaccgggaaacagaagagttt
tacaccatcgaggtaaccgcaacagatggaggggctccaccaaaatctgggtctaccacc
gtttacatacgagtgctggactttaacgataacagccctacatttgaacacagctcgctc
aaagtggagctgaacgaagattcacccgtcggttcccgtgtgctgaaagttcacgcgttc
gactccgatgccgggattaacggggaagttgtttacgggtttgtcgaaggctccccgtcg
gacgttacacgcgtcttccagatcgatctcatctctggggaggtgactcttaaagacgcg
gtcgattacgagaaaaagaagtcgtacgagtttcacatccaggcctccgatttgggcacc
agttctgtttcgtctacgtgtcgggccattgtagacatcgttgatgtgaacgacaacgcg
ccagagatcagcattaagcccatgacctccacgagtgacggggtggccttcatcaccgag
gccgcggccgtggagagcttcgtggctctggtgagcacctcggacagcgactctggaccc
aacggttacgtgcgcacgagtctgcgcggacacgagcattttaaattgcaacaggcatac
agcgacacatttatgatcgttacgaccgccactttggacagggaaactatttcagagtac
aatctcacagtggtggccgaggatttgggaacgccgccttttaaaaccgttacgcattat
acgatacgcatcacggatgagaacgacaatgcaccggtgttcagcaaagacatttacgat
gtatcagtgatagagaacaacatcccggggtcgtacataaccacagttgttgcgagggat
ctcgacactgggaaaaatggaaaggtgtcatacagccttgttgacggcaaaacgcgcgat
ggtgccgcgctatcgacgtttgtgtccatagaccctgtctctggatctctctacactctg
agatcgttcaactttgaggcttttaaagaagtccagtttactgttaaagccactgacaaa
ggttccctgccactatccagcactgctttagtaagaatccacgtggtggatgaaaatgac
aactccccatattttacatatccagtcttgaggaatcatacagctgacattccaataccc
ctgaacgcccagcgtggttacctggctttatgtgtgaccgcgctagatgaagacaatggt
gacaacagtgaactgagtttccatattcttgagaacgacgcacaacttttcttcatggat
aaaaagagtggggaaattattttgcgccaaagtctgacagcatcatgtggggaagttctg
caggtcagggtttctgttgtggacaacggcagagagcctctatccaccacggccactatc
cggtttgtggtgacggacactggctcccaggaggaccacgtggttattttactccggtct
aaggatgaagagaccctaagctttgatgttgggatggtggttatccttgctacagcaggg
gggtgcgcgctgttgctgacagccattggcatcctagcggtgacctgcaacagaagatgc
agacggagaaactacgggagagacggtctgtacgggtcgagccctttttctaaaagcaac
actgtcacctcagatatatacggtggccctggtgcctttctgcctcatgaaggagattca
gtacaccactgtctttatgaagacaagagcctggactttgaggaaaagctgttcctgcca
tgcaaaccctttgagcaaacatttctatggcaagatgaaaaatactgtctacagaggagt
ggcaccagcaacacggatcagctgagcgtgaaggacagcggcaaaggagacagtgatttc
aatgacagtgattctgacaccagcgcagccgctctcaaaagaagcctgacaacatttcaa
ccagtgagcagaagctcattcacctgtgtaggagactggaaaggcaaacagcgggttata
cagacgcagaacatgcacgttccacccggcacgccctacacgataggtttttctgctccg
gtttacaacatgagccatgttcattctcatccctggaaagaaggttttaataaaacaaac
acgttacagacgttctccaggactccagcgcggccttcaaaccctctccatccgctggaa
ggaaggaccgctgatgttgaggagcaaactgaacccgtgaaggatgcgctgacggttttg
gctgtttgtgaagttgctacaaccttttaa
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